# select species, count(species) from species group by species order by count(species) desc

human 1743119

rats 1094749

mice 1048017

rat 722695

mouse 455465

HIV 299531

humans 200892

dogs 184294

bovine 168076

yeast 155459

man 155206

Escherichia coli 154905

Rabbit 154336

E. coli 136396

HIV-1 124879

rabbits 115273

HCV 107620

sheep 90782

pigs 88158

cats 70635

cows 70593

tobacco 69213

chicken 65545

HBV 63945

cattle 63614

dog 59534

cat 54853

CMV 52299

pig 48215

wheat 47988

Staphylococcus aureus 44990

rice 44486

guinea pig 43702

calves 42599

H. pylori 42112

Saccharomyces cerevisiae 41144

transgenic mice 40095

chick 39665

calf 38450

horses 38358

adenovirus 37306

EBV 37109

chickens 35700

HPV 35322

Wistar rats 35125

corn 34914

guinea pigs 33019

human immunodeficiency virus 32504

S. aureus 32262

Soybean 31249

SHR 30995

Sprague-Dawley rats 30070

MRSA 28397

maize 27360

Pseudomonas aeruginosa 27195

swine 26263

lambs 25597

zebrafish 24998

nude mice 24649

P. aeruginosa 24293

horse 23677

SV40 23207

guinea-pig 22999

LI 22930

HSV-1 22578

cow 22200

RSV 22074

Lake 21490

Chinese hamster 20942

hepatitis C virus 20692

goats 20194

gag 19624

horseradish 18900

hepatitis B virus 18644

C. albicans 18472

equine 18291

hepatitis C 18057

Tomato 17975

Epstein-Barr virus 17773

fossa 17605

M. tuberculosis 17480

Candida albicans 17193

turkey 16959

Mycobacterium tuberculosis 16767

Bacillus subtilis 16621

influenza virus 16580

Drosophila melanogaster 16450

barley 16439

MAC 16401

cotton 16272

Helicobacter pylori 16145

goat 15262

Plasmodium falciparum 14872

yeasts 14839

Arabidopsis thaliana 14565

S. cerevisiae 14271

potato 13328

P. falciparum 13212

L. monocytogenes 12690

HCMV 12630

Streptococcus pneumoniae 12305

retrovirus 12229

human immunodeficiency virus type 1 12052

SIV 11958

coffee 11874

bacteriophage 11820

human papillomavirus 11691

C. elegans 11628

poliovirus 11268

Xenopus laevis 11242

Caenorhabditis elegans 10998

Baculovirus 10982

rhesus monkeys 10960

T. cruzi 10955

B. subtilis 10939

Haemophilus influenzae 10515

VZV 10424

vaccinia virus 10054

marijuana 9735

pea 9666

T. gondii 9477

Listeria monocytogenes 9359

rainbow trout 9294

tetra 9287

HEV 9232

herpesvirus 8928

peanut 8927

S. pneumoniae 8862

CFA 8802

H. influenzae 8762

Apple 8604

mum 8395

Klebsiella pneumoniae 8208

comet 7963

PVA 7933

Alfalfa 7872

chimpanzees 7685

Toxoplasma gondii 7564

HIV-2 7556

WKy 7502

C. jejuni 7490

spinach 7444

PPV 7415

V. cholerae 7331

Trypanosoma cruzi 7261

goldfish 7242

WNV 7033

Chlamydia trachomatis 6856

C. trachomatis 6793

garlic 6760

B. burgdorferi 6714

P. gingivalis 6629

CNV 6604

Schistosoma mansoni 6272

HHV-6 6262

chimpanzee 6250

turkeys 6249

carp 6247

S. mutans 6177

BVDV 6175

simian virus 40 6150

S. mansoni 6099

FIV 6077

VSV 6008

MMTV 5979

PCV 5907

Herpes simplex virus type 1 5893

C. difficile 5852

oat 5825

AAV 5824

PRV 5753

HAV 5753

anthrax 5647

K. pneumoniae 5614

NDV 5596

HDV 5487

duck 5468

rhesus monkey 5443

M. bovis 5442

D. melanogaster 5433

measles virus 5430

human cytomegalovirus 5425

M. leprae 5411

bee 5348

Schizosaccharomyces pombe 5314

C. parvum 5261

L. pneumophila 5249

Vibrio cholerae 5238

C. pneumoniae 5185

Staphylococcus epidermidis 5180

influenza A virus 5082

Pneumocystis carinii 5076

Neisseria gonorrhoeae 5074

fission yeast 4996

mink 4991

Salmonella enterica 4967

PRRSV 4947

rye 4942

respiratory syncytial virus 4884

reovirus 4874

ducks 4863

bees 4785

P. carinii 4745

murine leukemia virus 4721

vesicular stomatitis virus 4699

MV 4671

cardinal 4633

FMDV 4611

sorghum 4587

ginseng 4512

Borrelia burgdorferi 4507

bacteriophages 4476

S. epidermidis 4471

C. neoformans 4423

HP 4421

Aspergillus fumigatus 4417

TMV 4397

BLV 4389

Ad 4376

Zea mays 4359

dengue virus 4357

Cryptococcus neoformans 4314

MCMV 4304

Enterococcus faecalis 4298

Campylobacter jejuni 4292

Clostridium difficile 4267

Neisseria meningitidis 4247

LCMV 4136

A. fumigatus 4133

ferrets 4129

P. vivax 4128

rabies virus 4120

catfish 4092

ferret 4077

E. faecalis 4075

beagle dogs 4053

cucumber 4052

M. avium 4015

Streptococcus pyogenes 3976

KSHV 3971

Euro 3968

HGV 3962

E. histolytica 3954

smallpox 3951

Pseudomonas putida 3950

Aedes aegypti 3943

Streptococcus mutans 3939

Bacillus thuringiensis 3928

Y. enterocolitica 3922

non-A 3904

Aspergillus niger 3773

BPV 3740

Serratia marcescens 3736

elk 3734

Neurospora crassa 3725

cynomolgus monkeys 3715

B. cereus 3704

Clostridium perfringens 3695

onion 3683

Mycobacterium bovis 3679

Bacillus cereus 3628

B. pertussis 3615

Sendai virus 3614

MTB 3608

EPEC 3601

N. gonorrhoeae 3556

Dictyostelium discoideum 3519

L. major 3501

Bacteroides fragilis 3494

Trypanosoma brucei 3468

Phaseolus vulgaris 3454

S. pombe 3430

TTV 3419

Mayo 3419

M. pneumoniae 3384

Entamoeba histolytica 3347

Legionella pneumophila 3312

drill 3302

rhesus macaques 3286

STEC 3280

IBDV 3267

C. perfringens 3263

Yersinia enterocolitica 3244

Bordetella pertussis 3239

Rous sarcoma virus 3235

B. fragilis 3225

A. thaliana 3221

BKV 3216

ETEC 3216

medaka 3190

Oryza sativa 3189

BTV 3187

Nicotiana tabacum 3186

carrot 3181

T. brucei 3152

CAV 3148

Pichia pastoris 3142

A. actinomycetemcomitans 3131

apes 3113

Proteus mirabilis 3099

CDV 3095

SFV 3083

Agrobacterium tumefaciens 3042

B. thuringiensis 3041

silkworm 3041

Mycoplasma pneumoniae 2996

B. anthracis 2985

hepatitis A virus 2968

Y. pestis 2967

lime 2947

BDV 2943

ovo 2918

simian immunodeficiency virus 2918

GBV-C 2914

varicella-zoster virus 2907

P. putida 2898

coxsackievirus 2869

Atlantic salmon 2853

soybeans 2846

bullfrog 2831

Syrian hamsters 2817

Porphyromonas gingivalis 2814

Pseudomonas sp 2797

Aspergillus nidulans 2787

Glycine max 2736

West Nile virus 2735

Newcastle disease virus 2723

Syrian hamster 2716

banana 2707

E. faecium 2696

guar 2694

EHEC 2693

Pseudomonas fluorescens 2688

N. caninum 2674

Macaca mulatta 2666

N. meningitidis 2661

safflower 2642

adeno-associated virus 2626

Chlamydomonas reinhardtii 2613

Pisum sativum 2613

JCV 2602

S. pyogenes 2593

Triticum aestivum 2565

CPV 2561

A. niger 2557

Japanese quail 2550

Suzuki 2529

cassava 2515

SHRs 2514

MuLV 2512

P. multocida 2511

JEV 2505

Bt 2503

MDV 2482

E.coli 2482

L. donovani 2481

Bombyx mori 2476

EHV-1 2475

Chlamydia pneumoniae 2465

sesame 2462

potatoes 2454

PTV 2448

cocoa 2448

B. abortus 2432

A. baumannii 2408

marmosets 2406

Bacillus anthracis 2400

Leishmania donovani 2400

L. lactis 2397

VV 2394

Mycobacterium leprae 2390

Enterobacter cloacae 2386

leishmania major 2380

Lactococcus lactis 2353

sugarcane 2347

group A streptococci 2332

Oncorhynchus mykiss 2330

MSV 2329

Enterococcus faecium 2327

PCV2 2325

Sindbis virus 2320

Pasteurella multocida 2274

lobster 2269

C. glabrata 2258

strawberry 2244

Mycobacterium avium 2239

earthworm 2231

V. parahaemolyticus 2210

parvovirus B19 2202

bacteriophage lambda 2201

honeybee 2197

Giardia lamblia 2195

S. enterica 2176

Manduca sexta 2172

S. marcescens 2164

Pseudomonas syringae 2163

T. vaginalis 2152

Cryptosporidium parvum 2151

T. spiralis 2134

Plasmodium berghei 2130

Brucella abortus 2126

C. burnetii 2125

camel 2123

A. nidulans 2121

X. laevis 2109

radish 2109

apples 2108

MPV 2094

Macaca fascicularis 2089

pseudorabies virus 2088

FeLV 2086

earthworms 2075

mouse mammary tumor virus 2064

C. tropicalis 2051

Bacillus stearothermophilus 2051

M. smegmatis 2043

pear 2036

Ginkgo biloba 2035

S. flexneri 2033

camels 2012

honeycomb 2010

teleost fish 2004

Shigella flexneri 1996

phage lambda 1993

Starling 1988

Anopheles gambiae 1978

Clostridium botulinum 1967

grapefruit 1963

Mus musculus 1956

F. tularensis 1955

tobacco mosaic virus 1954

A. flavus 1948

P. syringae 1945

actinomycete 1933

Plasmodium vivax 1932

Rubella virus 1929

ADV 1923

Colo 1916

P. acnes 1915

yawning 1904

LDV 1903

S. haematobium 1901

Trichomonas vaginalis 1898

P. mirabilis 1892

T. pallidum 1886

Rhodobacter sphaeroides 1880

P. fluorescens 1879

ginger 1873

ALV 1869

Ricinus communis 1863

A. hydrophila 1860

C. coli 1857

S. japonicum 1854

Treponema pallidum 1850

Thermus thermophilus 1847

Homo sapiens 1844

Mycobacterium smegmatis 1844

P. pastoris 1843

V. vulnificus 1839

EIAV 1833

Aeromonas hydrophila 1832

Yersinia pestis 1830

fruit fly 1828

Aspergillus flavus 1827

RRV 1824

Hordeum vulgare 1821

lemon 1814

elephant 1809

AMV 1803

P. berghei 1803

Red deer 1802

Fasciola hepatica 1795

Black tea 1788

RV 1773

sugar beet 1772

DHBV 1770

reindeer 1754

Trichinella spiralis 1742

Danio rerio 1739

oats 1730

L. plantarum 1727

Spodoptera frugiperda 1716

Lymphocytic choriomeningitis virus 1714

C. parapsilosis 1705

gorilla 1697

PMV 1696

streptococcus faecalis 1696

F. hepatica 1692

Actinobacillus actinomycetemcomitans 1689

TCV 1688

Peach 1685

cowpea 1677

beet 1675

BMV 1663

L. casei 1655

foot-and-mouth disease virus 1649

N. crassa 1634

Acinetobacter baumannii 1632

Amphioxus 1631

Lactobacillus casei 1631

golden hamsters 1630

tuna 1628

goose 1626

peanuts 1623

DENV 1608

Lactobacillus plantarum 1607

cynomolgus monkey 1607

channel catfish 1606

Sprague-Dawley rat 1600

Bacillus sp 1598

AAV2 1596

Echinococcus granulosus 1594

GAS 1592

Histoplasma capsulatum 1589

Haemonchus contortus 1585

raccoons 1576

B. pseudomallei 1560

B virus 1559

bream 1556

Ascaris suum 1554

S. sanguis 1548

Brassica napus 1546

Streptomyces coelicolor 1545

flax 1544

C. glutamicum 1540

herpes simplex virus type 2 1540

lentil 1536

Lycopersicon esculentum 1534

HSV1 1528

Coxiella burnetii 1513

Candida tropicalis 1513

Aedes albopictus 1511

G. lamblia 1504

BRSV 1504

FPV 1503

Y. pseudotuberculosis 1501

Streptococcus agalactiae 1500

white-tailed deer 1500

baker's yeast 1491

Moraxella catarrhalis 1487

Ascaris lumbricoides 1476

perch 1471

Schistosoma japonicum 1464

FCV 1458

Fusarium oxysporum 1457

H. contortus 1456

Mongolian gerbils 1456

daphnia magna 1453

A. pleuropneumoniae 1450

NTHI 1450

B. henselae 1446

echovirus 1445

niger 1440

honey bee 1437

A. tumefaciens 1434

M. catarrhalis 1433

Propionibacterium acnes 1428

HHV-7 1427

Vibrio parahaemolyticus 1424

mumps virus 1422

GBS 1420

S. suis 1419

Rana pipiens 1409

D. discoideum 1408

scallop 1406

Mycobacterium avium complex 1405

peas 1403

CSFV 1400

R. equi 1394

almond 1393

E. granulosus 1392

Solanum tuberosum 1391

lambda phage 1388

Cyprinus carpio 1381

turmeric 1375

Norway rats 1372

E. cloacae 1372

Ixodes ricinus 1372

Bacillus megaterium 1363

Bos taurus 1362

Apis mellifera 1354

U. urealyticum 1350

Rattus norvegicus 1346

Vicia faba 1345

bluetongue virus 1344

C. botulinum 1339

JC virus 1337

Helix pomatia 1334

feline immunodeficiency virus 1325

euros 1325

rhesus macaque 1321

Culex quinquefasciatus 1317

chinchilla 1314

cauliflower mosaic virus 1313

EMCV 1312

ape 1311

Ureaplasma urealyticum 1310

C. reinhardtii 1302

JE 1302

avian influenza virus 1301

VTEC 1298

P. brasiliensis 1296

swift 1292

O. volvulus 1289

M. hominis 1288

Nicotiana benthamiana 1284

MG 1278

C. krusei 1276

Dermatophagoides pteronyssinus 1274

PVY 1274

PVX 1274

Azotobacter vinelandii 1266

cinnamon 1259

Candida glabrata 1257

A. phagocytophilum 1255

domestic cats 1255

honeybees 1253

Laboratory rats 1248

hepatitis E virus 1247

Bacillus licheniformis 1244

M. paratuberculosis 1243

F. nucleatum 1243

D. simulans 1240

bacteriophage T7 1239

BIV 1238

Autographa californica 1236

carrots 1235

WHV 1233

L. infantum 1229

B. bronchiseptica 1228

E. tenella 1228

MAI 1226

Micrococcus luteus 1226

wild boar 1225

HIV1 1224

H. capsulatum 1224

axolotl 1216

P. haemolytica 1212

Aspergillus oryzae 1210

Francisella tularensis 1206

Ebola virus 1206

neem 1204

Onchocerca volvulus 1204

encephalomyocarditis virus 1200

MSSA 1193

Streptococcus sanguis 1191

Lactobacillus acidophilus 1190

HHV8 1188

BK virus 1188

common carp 1185

M. kansasii 1185

SVV 1181

L. acidophilus 1175

ellipse 1172

A. marginale 1168

ASFV 1166

Neospora caninum 1166

B. napus 1166

Ulex europaeus 1165

sweet potato 1165

S. coelicolor 1165

chickpea 1164

Streptomyces lividans 1156

kava 1155

Schistosoma haematobium 1154

B. cepacia 1154

tall fescue 1154

papaya 1153

Salmo salar 1149

MAP 1142

E. multilocularis 1142

Toxocara canis 1142

New Zealand rabbits 1141

African green monkey 1141

Corynebacterium glutamicum 1141

EAV 1139

Citrobacter freundii 1135

ostrich 1135

tiger 1128

T. congolense 1121

M. intracellulare 1121

C. psittaci 1121

canary 1119

MLV 1117

Leishmania infantum 1116

S. lividans 1116

Fusobacterium nucleatum 1116

murine cytomegalovirus 1115

Yersinia pseudotuberculosis 1111

Candida parapsilosis 1108

A. suum 1105

S. bovis 1104

R. meliloti 1103

B. mori 1100

sperm whale 1099

Proteus vulgaris 1096

Kaposi's sarcoma-associated herpesvirus 1095

Rana catesbeiana 1095

Rhodobacter capsulatus 1093

C. dubliniensis 1093

Brugia malayi 1092

B. melitensis 1087

Lymnaea stagnalis 1083

B. bovis 1081

donkey 1078

Tetrahymena thermophila 1076

Strongyloides stercoralis 1072

PV 1068

CP 1068

golden hamster 1067

I. ricinus 1062

drills 1056

nuclear polyhedrosis virus 1055

H. ducreyi 1054

Botrytis cinerea 1054

Tetrahymena pyriformis 1052

D. magna 1048

LM 1048

malachite 1047

Sulfolobus solfataricus 1045

bovine viral diarrhea virus 1045

Chlamydia psittaci 1045

Trichoderma reesei 1044

Leptospira interrogans 1044

Medicago sativa 1043

Wuchereria bancrofti 1043

CHC 1037

ramps 1037

P. yoelii 1036

llamas 1034

Rana temporaria 1033

Compton 1032

CAEV 1031

donkeys 1031

Japanese encephalitis 1030

gatekeeper 1028

PVM 1028

T. denticola 1027

M. fortuitum 1027

Rhodospirillum rubrum 1024

Panax ginseng 1023

hepatitis delta virus 1021

Taenia solium 1021

Rhizobium meliloti 1020

Pasteurella haemolytica 1020

moose 1017

Vibrio vulnificus 1017

emu 1014

amaranth 1013

turbot 1012

F. oxysporum 1011

Culex pipiens 1009

Euglena gracilis 1008

lion 1007

Mytilus edulis 1006

chinchillas 1005

Trichophyton rubrum 1003

S. meliloti 1002

Phanerochaete chrysosporium 1001

T. solium 1000

domestic cat 995

bovine leukemia virus 993

Syrian golden hamsters 991

Japanese encephalitis virus 991

Mycoplasma hominis 990

S. sonnei 990

P. vulgaris 989

gorillas 986

Synechocystis sp. PCC 6803 984

R. sphaeroides 983

Oryzias latipes 982

SFFV 978

canine distemper virus 975

domestic pigs 973

Ber 972

AIV 970

bovine papillomavirus 969

Dirofilaria immitis 969

Kluyveromyces lactis 968

honey bees 966

Trichophyton mentagrophytes 965

Shigella sonnei 965

Musca domestica 964

Paracoccidioides brasiliensis 963

mango 962

lions 962

Myxococcus xanthus 961

Physarum polycephalum 961

TEV 955

T. thermophilus 954

PA 954

raccoon 953

K. lactis 947

TBEV 944

brown trout 944

B. malayi 944

parsley 944

Bradyrhizobium japonicum 944

Vibrio fischeri 941

kangaroo 941

T. evansi 939

Acinetobacter calcoaceticus 939

Ct 939

B. japonicum 937

Brucella melitensis 936

S. agalactiae 935

Paracoccus denitrificans 933

Rhizobium leguminosarum 933

A. oryzae 927

Argentine 926

Aplysia californica 924

infectious bursal disease virus 921

Streptomyces griseus 920

peppermint 919

VHSV 918

feline leukemia virus 918

T. canis 917

abalone 916

group B streptococcus 916

orangutan 911

HVT 910

gibbon 909

E. chaffeensis 908

D. pteronyssinus 908

CaMV 907

avocado 905

Sinorhizobium meliloti 903

zebra finch 903

Rana esculenta 903

Carassius auratus 902

Shigella dysenteriae 898

S. maltophilia 897

M. sexta 897

starlings 896

Burkholderia pseudomallei 894

herpes simplex virus 1 893

R. leguminosarum 893

mito 891

Vitis vinifera 891

D. immitis 889

T. parva 889

woodchucks 888

B. licheniformis 888

red clover 886

B. stearothermophilus 885

Burkholderia cepacia 884

Marek's disease virus 882

Actinobacillus pleuropneumoniae 880

ginkgo 875

rosemary 874

Medicago truncatula 871

influenza B virus 867

human herpesvirus 8 866

A. aegypti 866

watermelon 866

M. gallisepticum 865

S. sobrinus 865

oilseed rape 865

llama 864

cline 864

MAV 864

C. pylori 861

hagfish 858

M. hyopneumoniae 858

Callithrix jacchus 858

Stenotrophomonas maltophilia 856

human herpesvirus 6 856

bovines 856

HERV-K 854

SSV 854

Mycoplasma gallisepticum 854

T. mentagrophytes 854

porcine reproductive and respiratory syndrome virus 853

Biomphalaria glabrata 852

M. tuberculosis complex 851

P. intermedia 849

T. rubrum 847

EAEC 842

CIV 839

M. xanthus 839

Pyrococcus furiosus 838

Streptococcus thermophilus 838

Periplaneta americana 837

Pan troglodytes 835

IPNV 834

I. scapularis 833

ST 833

N. brasiliensis 833

Eimeria tenella 833

S. gordonii 832

C. sinensis 832

marine bacterium 832

REV 830

wild boars 828

Nippostrongylus brasiliensis 827

SHIV 826

Thermotoga maritima 825

Enterobacter aerogenes 823

Woodchuck 821

zebu 821

E. canis 821

M. genitalium 820

Bordetella bronchiseptica 818

L. innocua 817

avian myeloblastosis virus 815

fruit flies 815

UPEC 813

Strongylocentrotus purpuratus 813

Echinococcus multilocularis 812

Caulobacter crescentus 812

mongolian gerbil 811

Bufo marinus 810

B. garinii 808

Pseudomonas cepacia 808

S. faecalis 806

B19 805

Trichuris trichiura 805

IAV 804

B. cinerea 804

chinook salmon 803

Candida krusei 801

Prevotella intermedia 799

P. cepacia 799

S. thermophilus 799

Bos indicus 798

Penicillium chrysogenum 798

sturgeon 797

SV5 795

V. harveyi 794

Ciona intestinalis 794

Puma 792

Chat 792

VACV 792

Mycobacterium tuberculosis complex 790

Klebsiella oxytoca 788

A. vinelandii 788

onions 787

Plasmodium yoelii 787

lucerne 786

Torpedo californica 786

B. megaterium 786

Campylobacter coli 783

midge 777

Xanthomonas campestris 774

M. marinum 772

M. avium subsp. paratuberculosis 770

Branhamella catarrhalis 770

SV 769

V. fischeri 769

Coca 768

lobsters 768

Coccidioides immitis 763

L. mexicana 763

human rhinovirus 762

Ixodes scapularis 758

Sus scrofa 758

Anopheles stephensi 757

Gunn rats 756

liver fluke 755

B. bassiana 754

DBS 752

Gossypium hirsutum 752

PHV 748

S. dysenteriae 747

filamentous phage 746

Japanese cedar 745

B. afzelii 744

coho salmon 743

group A streptococcus 742

Mesocricetus auratus 742

Lens culinaris 742

Synechococcus sp 742

Norway spruce 741

oregano 741

comets 740

B. sphaericus 740

castor bean 740

visna virus 739

T. vivax 739

B. glabrata 738

coyotes 738

Bartonella henselae 737

Microsporum canis 737

D. farinae 736

Streptococcus bovis 736

pineapple 732

timothy 731

JSRV 729

A. gambiae 728

Dermatophagoides farinae 727

LEC 727

Allium cepa 727

Trypanosoma congolense 727

Atlantic cod 727

F. graminearum 724

Meriones unguiculatus 723

Rhodococcus equi 720

Pc 719

tamarins 718