Figure 1.
Distribution of frequency (absolute numbers) over the length.
The constructed unigenes from de-novo assembly of Cephalotaxus hainanensis short reads were generated by Illumina Hiseq 2000 sequencing. The total number of assembled unigenes is 39,416 unigene.
Table 1.
Quantitative characteristics of the reconstructed C. hainanensis transcriptome.
Figure 2.
Frequency distribution ontological classifications.
The results are grouped into three main categories: biological process, cellular component and molecular function. The right y-axis indicates the number of genes in a category. The left y-axis indicates the percentage of a specific category of genes in that main category. Note that this axis is logarithmic to appropriately depict the large variations in abundance.
Table 2.
List of selected unigenes involved in paclitaxel biosynthesis.
Table 3.
Frequency of single-stranded repeats (SSR) in the ESTs constructed from C. hainanensis.
Table 4.
Frequency of individual di- and trinucleotide SSR motives in the ESTs constructed from C. hainanensis.
Figure 3.
Time course of paclitaxel and baccatin III accumulation in leaves of C. hainanensis after induction with 1 µM MeJA.
Mean values and standard errors from three independent experimental series are shown. * Significantly different from the untreated control at the 95% confidence level, ** significantly different form the untreated control at the 99% confidence level.