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Issue: Vol. 627 No. 1: 29 Nov. 2023
Type: Monograph
Published: 2023-11-29
DOI: 10.11646/phytotaxa.627.1.1
Page range: 1-64
Abstract views: 149
PDF downloaded: 16

Botryosphaeriaceae on palms—a new species of Neodeightonia, N. chamaeropicola, and new records from diseased foliage of ornamental palms in Portugal

Universidade de Lisboa; Faculdade de Ciências; Biosystems and Integrative Sciences Institute (BioISI); Campo Grande; 1749-016 Lisbon; Portugal
Universidade de Lisboa; Faculdade de Ciências; Biosystems and Integrative Sciences Institute (BioISI); Campo Grande; 1749-016 Lisbon; Portugal
fungi leaf diseases new species palm fungi phylogeny taxonomy

Abstract

The Botryosphaeriaceae is the largest family in Botryosphaeriales and currently comprises 22 genera of important endophytes, saprobes and plant pathogens. Most botryosphaeriaceous species have a cosmopolitan distribution, occurring on a wide range of woody hosts. Nonetheless, in many hosts, including palms (Arecaceae), the complex of associated Botryosphaeriaceae taxa is as yet unknown. The present study aimed to identify the botryosphaeriaceous species associated with foliar lesions of ornamental palms in Lisbon, Portugal. Twenty-nine Botryosphaeriaceae taxa were isolated from seven different palm species and identified based on both morphological and phylogenetic analyses. Six genera were detected: Botryosphaeria, Diplodia, Dothiorella, Neodeightonia, Neofusicoccum and Sardiniella. A new species of Neodeightonia, N. chamaeropicola, is introduced. Three botryosphaeriaceous species are reduced to synonymy. Thirteen new plant host-fungus associations are reported, while four new geographical records are noted for Portugal. A synopsis of accepted and phylogenetically validated Botryosphaeriaceae taxa reported from palms worldwide is presented. A total of 31 botryosphaeriaceous species have been currently reported from Arecaceae hosts, and many of them are associated with disease symptoms. This illustrates that more systematic studies are needed to examine the complex of Botryosphaeriaceae taxa associated with palms and determine their potential pathogenicity.

 

References

  1. Abdollahzadeh, J. (2015) Diplodia bulgarica, as a new pathogen and potential threat to the apple industry in Iran. Phytopathologia Mediterranea 54: 128–132. https://doi.org/10.14601/Phytopathol_Mediterr-14686
  2. Abdollahzadeh, J., Javadi, A., Zare, R. & Phillips, A.J.L. (2014) A phylogenetic study of Dothiorella and Spencermartinsia species associated with woody plants in Iran, New Zealand, Portugal and Spain. Persoonia 32: 1–12. https://doi.org/10.3767/003158514X678606
  3. Abdollahzadeh, J., Zare, R. & Phillips, A.J.L. (2013) Phylogeny and taxonomy of Botryosphaeria and Neofusicoccum species in Iran, with description of Botryosphaeria scharifii sp. nov. Mycologia 105: 210–220. https://doi.org/10.3852/12-107
  4. Adamcik, S., Cai, L., Chakraborty, D., Chen, X.-H., Cotter, H.V.T., Dai, D.-Q., Dai, Y.-C., Das, K., Deng, C., Ghobad-Nejhad, M., Hyde, K.D., Langer, E., Latha, K.P.D., Liu, F., Liu, S.-L., Liu, T., Lv, W., Lv, S.-X., Machado, A.R., Pinho, D.B., Pereira, O.L., Prasher, I.B., Rosado, A.W.C., Qin, J., Qin, W.-M., Verma, R.K., Wang, Q., Yang, Z.-L., Yu, X.-D., Zhou, L.-W. & Buyck, B. (2015) Fungal biodiversity profiles 1–10. Cryptogamie, Mycologie 36: 121–166. https://doi.org/10.7872/crym/v36.iss2.2015.121
  5. Al-Sadi, A.M., Al-Jabri, A.H., Al-Mazroui, S.S. & Al-Mahmooli, I.H. (2012) Characterization and pathogenicity of fungi and oomycetes associated with root diseases of date palms in Oman. Crop Protection 37: 1–6. https://doi.org/10.1016/j.cropro.2012.02.011
  6. Al-Sadi, A.M., Al-Wehaibi, A.N., Al-Shariqi, R.M., Al-Hammadi, M.S., Al-Hosni, I.A., Al-Mahmooli, I.H. & Al-Ghaithi, A.G. (2013) Population genetic analysis reveals diversity in Lasiodiplodia species infecting date palm, Citrus, and mango in Oman and the UAE. Plant Disease 97: 1363–1369. https://doi.org/10.1094/PDIS-03-13-0245-RE
  7. Alvarez-Loayza, P., White Jr., J.F., Bergen, M. & Cadenas, C. (2008) Diplodia mutila causing seedling mortality of the palm Iriatea deltoidea. Plant Pathology 57: 382. https://doi.org/10.1111/j.1365-3059.2007.01747.x
  8. Alves, A., Correia, A. & Phillips, A.J.L. (2006) Multi-gene genealogies and morphological data support Diplodia cupressi sp. nov., previously recognized as D. pinea f. sp. cupressi, as a distinct species. Fungal Diversity 23: 1–15.
  9. Alves, A., Correia, A., Luque, J. & Phillips, A. (2004) Botryosphaeria corticola, sp. nov. on Quercus species, with notes and description of Botryosphaeria stevensii and its anamorph, Diplodia mutila. Mycologia 96: 598–613. https://doi.org/10.1080/15572536.2005.11832956
  10. Alves, A., Crous, P.W., Correia, A. & Phillips, A.J.L. (2008) Morphological and molecular data reveal cryptic species in Lasiodiplodia theobromae. Fungal Diversity 28: 1–13.
  11. Alves, A., Linaldeddu, B.T., Deidda, A., Scanu, B. & Phillips, A.J.L. (2014) The complex of Diplodia species associated with Fraxinus and some other woody hosts in Italy and Portugal. Fungal Diversity 67, 143–156. https://doi.org/10.1007/s13225-014-0282-9
  12. Barber, P.A., Burgess, T.J., Hardy, G.E.St.J., Slippers, B., Keane, P.J. & Wingfield, M.J. (2005) Botryosphaeria species from Eucalyptus in Australia are pleoanamorphic, producing Dichomera synanamorphs in culture. Mycological Research 109: 1347–1363. https://doi.org/10.1017/S0953756205003989
  13. Barr, M.E. (1972) Preliminary studies on the Dothideales in temperate North America. Contributions from the University of Michigan Herbarium 9: 523–638.
  14. Batista, E., Lopes, A. & Alves, A. (2021) What do we know about Botryosphaeriaceae? An overview of a worldwide cured dataset. Forests 12: 313. https://doi.org/10.3390/f12030313
  15. Begoude, B.A.D., Slippers, B., Wingfield, M.J. & Roux, Y. (2010) Botryosphaeriaceae associated with Terminalia catappa in Cameroon, South Africa and Madagascar. Mycological Progress 9: 101–123.
  16. Bengyella, L., Waikhom, S.D., Talukdar, N.C & Roy, P. (2015) Black list of unreported pathogenic bambusicolous fungi limiting the production of edible bamboo. Journal of Plant Pathology and Microbiology 6: 264. https://doi.org/10.4172/2157-7471.1000264
  17. Berraf-Tebbal, A., Mahamedi, A.E., Aigoun-Mouhous, W., Špetík, M., Čechová, J., Pokluda, R., Baránek, M., Eichmeier, A. & Alves, A. (2020) Lasiodiplodia mitidjana sp. nov. and other Botryosphaeriaceae species causing branch canker and dieback of Citrus sinensis in Algeria. PLOS ONE 15: e0232448. https://doi.org/10.1371/journal.pone.0232448
  18. Billones-Baaijens, R. & Savocchia, S. (2019) A review of Botryosphaeriaceae species associated with grapevine trunk diseases in Australia and New Zealand. Australasian Plant Pathology 48: 3–18. https://doi.org/10.1007/s13313-018-0585-5
  19. Boonmee, S., Wanasinghe, D.N., Calabon, M.S., Huanraluek, N., Chandrasiri, S.K.U., Jones, G.E.B., Rossi, W., Leonardi, M., Singh, S.K., Rana, S., Singh, P.N., Maurya, D.K., Lagashetti, A.C., Choudhary, D., Dai, Y.C., Zhao, C.L., Mu, Y.H., Yuan, H.S., He, S.H., Phookamsak, R., Jiang, H.B., Martín, M.P., Dueñas, M., Telleria, M.T., Kałucka, I.L., Jagodziński, A.M., Liimatainen, K., Pereira, D.S., Phillips, A.J.L., Suwannarach, N., Kumla, J., Khuna, S., Lumyong, S., Potter, T.B., Shivas, R.G., Sparks, A.H., Vaghefi, N., Abdel‐Wahab, M.A., Abdel‐Aziz, F.A., Li, G.J., Lin, W.F., Singh, U., Bhatt, R.P., Lee, H.B., Nguyen, T.T.T., Kirk, P.M., Dutta, A.K., Acharya, K., Sarma, V.V., Niranjan, M., Rajeshkumar, K.C., Ashtekar, N., Lad, S., Wijayawardene, N.N., Bhat, D.J., Xu, R.J., Wijesinghe, S.N., Shen, H.W., Luo, Z.L., Zhang, J.Y., Sysouphanthong, P., Thongklang, N., Bao, D.F., Aluthmuhandiram, J.V.S., Abdollahzadeh, J., Javadi, A., Dovana, F., Usman, M., Khalid, A.N., Dissanayake, A.J., Telagathoti, A., Probst, M., Peintner, U., Garrido‐Benavent, I., Bóna, L., Merényi, Z., Boros, L., Zoltán, B., Stielow, J.B., Jiang, N., Tian, C.M., Shams, E., Dehghanizadeh, F., Pordel, A., Javan‐Nikkhah, M., Denchev, T.T., Denchev, C.M., Kemler, M., Begerow, D., Deng, C.Y., Harrower, E., Bozorov, T., Kholmuradova, T., Gafforov, Y., Abdurazakov, A., Xu, J.C., Mortimer, P.E., Ren, G.C., Jeewon, R., Maharachchikumbura, S.S.N., Phukhamsakda, C., Mapook, A. & Hyde, K.D. (2021) Fungal diversity notes 1387–1511: taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Diversity (2021) 111: 1–335. https://doi.org/10.1007/s13225-021-00489-3
  20. Brewer, M.T., Cameron, C.J., Chan, C.T., Dutta, B., Gitaitis, R.D., Grauke, L.J., Brock, J.H. & Brenneman, T.D. (2021) Neofusicoccum caryigenum, a new species causing leaf dieback disease of pecan (Carya illinoinensis). Mycologia 113: 586–598. https://doi.org/10.1080/00275514.2021.1880216
  21. Burgess, T.I., Tan, Y.P., Garnas, J., Edwards, J., Scarlett, K.A., Shuttleworth, L.A., Daniel, R., Dann, E.K., Parkinson, L.E., Dinh, Q., Shivas, R.G. & Jami, F. (2019) Current status of the Botryosphaeriaceae in Australia. Australasian Plant Pathology 48: 35–44. https://doi.org/10.1007/s13313-018-0577-5
  22. Cesati, V. & De Notaris, G. (1863) Schema di classificazione degli Sferiacei Italici aschigeri più o meno appartenenti al genere Sphaeria nell’antico significato attribuitogli da Persoon. Commentario della Società Crittogamologica Italiana 1: 177–240.
  23. Chen, Y.-Y., Dissanayake, A.J. & Liu, J.-K. (2021) Additions to Karst Fungi 5: Sardiniella guizhouensis sp. nov. (Botryosphaeriaceae) associated with woody hosts in Guizhou province, China. Phytotaxa 508: 187–196. https://doi.org/10.11646/phytotaxa.508.2.7
  24. Chethana, K.T., Xinghong, L., Zhang, W. & Jiye, Y. (2016) Trail of decryption of molecular research on Botryosphaeriaceae in woody plants. Phytopathologia Mediterranea 55: 147–171. https://doi.org/10.14601/Phytopathol_Mediterr-16230
  25. Coelho, I.L., de Assis, T.C., Ferraz, L.G.B., de Souza Freitas, M.T., de Queiroz Balbino, V., dos Santos Vieria, W.A., Neves, R.P., Doyle, V.P., Camara, M.P.S. & Laranjeira, D. (2022) Lasiodiplodia species diversity associated with coconut leaf blight and stem-end rot in Northeastern Brazil. European Journal of Plant Pathology 162: 45–61. https://doi.org/10.1007/s10658-021-02383-9
  26. Coutinho, I.B.L., Freire, F.C.O., Lima, C.S., Lima, J.S., Goncalves, F.J.T., Machado, A.R., Silva, A.M.S. & Cardoso, J.E. (2017) Diversity of genus Lasiodiplodia associated with perennial tropical fruit plants in Northeastern Brazil. Plant Pathology 66: 90–104. https://doi.org/10.1111/ppa.12565
  27. Crous, P.W. & Palm, M.E. (1999) Reassessment of the anamorph genera Botryodiplodia, Dothiorella and Fusicoccum. Sydowia 51: 167–175.
  28. Crous, P.W., Gams, W., Stalpers, J.A., Robert, V. & Stegehuis, G. (2004) MycoBank: an online initiative to launch mycology into the 21st century. Studies in Mycology 50: 19–22.
  29. Crous, P.W., Hernández-Restrepo, M., Schumacher, R.K., Cowan, D.A., Maggs-Kölling, G., Marais, E., Wingfield, M.J., Yilmaz, N., Adan, O.C.G., Akulov, A., Álvarez Duarte, E., Berraf-Tebbal, A., Bulgakov, T.S., Carnegie, A.J., de Beer, Z.W., Decock, C., Dijksterhuis, J., Duong, T.A., Eichmeier, A., Hien, L.T., Houbraken, J.A.M.P., Khanh, T.N., Liem, N.V., Lombard, L., Lutzoni, F.M., Miadlikowska, J.M., Nel, W.J., Pascoe, I.G., Roets, F., Roux, J., Samson, R.A., Shen, M., Spetik, M., Thangavel, R., Thanh, H.M., Thao, L.D., van Nieuwenhuijzen, E.J., Zhang, J.Q., Zhang, Y., Zhao, L.L. & Groenewald, J.Z. (2021) New and Interesting Fungi. 4. Fungal Systematics and Evolution 7: 255–343. https://doi.org/10.3114/fuse.2021.07.13
  30. Crous, P.W., Slippers, B., Wingfield, M.J., Rheeder, J., Marasas, W.F.O., Phillips, A.J.L., Alves, A., Burgess, T., Barber, P. & Groenewald, J.Z. (2006) Phylogenetic lineages in the Botryosphaeriaceae. Studies in Mycology 55: 235–253. https://doi.org/10.3114/sim.55.1.235
  31. Crous, P.W., Wingfield, M.J., Guarro, J., Cheewangkoon, R., van der Bank, M., Swart, W.J., Stchigel, A.M., Cano-Lira, J.F., Roux, J., Madrid, H., Damm, U., Wood, A.R., Shuttleworth, L.A., Hodges, C.S., Munster, M., de Jesús Yáñez-Morales, M., Zúñiga-Estrada, L., Cruywagen, E.M., de Hoog, G.S., Silvera, S., Najafzadeh, J., Davison, E.M., Davison, P.J.N., Barrett, M.D., Barrett, R.L., Manamgoda, D.S., Minnis, A.M., Kleczewski, N.M., Flory, S.L., Castlebury, L.A., Clay, K., Hyde, K.D., Maússe-Sitoe, S.N.D., Chen, S., Lechat, C., Hairaud, M., Lesage-Meessen, L., Pawłowska, J., Wilk, M., Śliwińska-Wyrzychowska, A., Mętrak, M., Wrzosek, M., Pavlic-Zupanc, D., Maleme, H.M., Slippers, B., Mac Cormack, W.P., Archuby, D.I., Grünwald, N.J., Tellería, M.T., Dueñas, M., Martín, M.P., Marincowitz, S., de Beer, Z.W., Perez, C.A., Gené, J., Marin-Felix, Y. & Groenewald, J.Z. (2013) Fungal Planet description sheets: 154–213. Persoonia 31: 188–296. http://dx.doi.org/10.3767/003158513X675925
  32. Cunnington, J.H., Priest, M.J., Powney, R.A. & Cother, N.J. (2007) Diversity of Botryosphaeria species on horticultural plants in Victoria and New South Wales. Australasian Plant Pathology 36: 157–159. https://doi.org/10.1071/AP07002
  33. da Silva Fonseca, M., Marchioro, M.L.K., Guimarães, D.K.S., Góes-Neto, A., Drechsler-Santos, E.R., Santos, V.A.Q., Barbosa-Dekker, A.M., Dekker, R.F.H. & Cunha, M.A.A. (2020) Neodeightonia phoenicum CMIB-151: isolation, molecular identification, and production and characterization of an exopolysaccharide. Journal of Polymers and the Environment 28: 1954–1966. https://doi.org/10.1007/s10924-020-01744-5
  34. Dai, D.Q., Phookamsak, R., Wijayawardene, N.N., Li, W.J., Bhat, D.J., Xu, J.C., Taylor, J.E., Hyde, K.D. & Chukeatirote, E. (2017) Bambusicolous fungi. Fungal Diversity 82: 1–105. https://doi.org/10.1007/s13225-016-0367-8
  35. Damm, U., Crous, P.W. & Fourie, P.H. (2007) Botryosphaeriaceae as potential pathogens of Prunus species in South Africa, with descriptions of Diplodia africana and Lasiodiplodia plurivora sp. nov. Mycologia 99 (5): 664–680. https://doi.org/10.1080/15572536.2007.11832531
  36. Darge, W. & Woldemariam, S. (2021) Botryosphaeria tree fungal pathogens and their diversity. International Journal of Phytopathology 10: 49–56. https://doi.org/10.33687/phytopath.010.01.3447
  37. Denman, S., Crous, P.W., Taylor, J.E., Kang, J.-C., Pascoe, I. & Wingfield, M.J. (2000) An overview of the taxonomic history of Botryosphaeria, and a re-evaluation of its anamorphs based on morphology and ITS rDNA phylogeny. Studies in Mycology 45: 129–140.
  38. Desprez-Loustau, M.L., Marçais, B., Nageleisen, L.M., Piou, D. & Vannini, A. (2006) Interactive effects of drought and pathogens in forest trees. Annals of Forest Science 63: 597–612. https://doi.org/10.1051/forest:2006040
  39. Desprez-Loustau, M.-L., Marçais, B., Nageleisen, L.-M., Piou, D. & Vannini, A. (2006) Interactive effects of drought and pathogens in forest trees. Annals of Forest Science 63: 597–612. https://doi.org/10.1051/forest:2006040
  40. Desprez-Loustau, M.-L., Robin, C., Reynaud, G., Déqué, M., Badeau, V., Piou, D., Husson, C. & Marcais, B. (2007) Simulating the effects of a climate-change scenario on the geographical range and activity of forest-pathogenic fungi. Canadian Journal of Plant Pathology 29: 101–120. https://doi.org/10.1080/07060660709507447
  41. Dissanayake, A.J., Camporesi, E., Hyde, K.D., Phillips, A.J.L., Fu, C.Y., Yan, J.Y. & Li, X.H. (2016b) Dothiorella species associated with woody hosts in Italy. Mycosphere 7: 51–63. https://doi.org/10.5943/mycosphere/7/1/6
  42. Dissanayake, A.J., Chen, Y.-Y., Cheewangkoon, R. & Liu, J.-K. (2021) Occurrence and morpho-molecular identification of Botryosphaeriales species from Guizhou Province, China. Journal of Fungi 7: 893. https://doi.org/10.3390/jof7110893
  43. Dissanayake, A.J., Phillips, A.J.L., Li, X.H. & Hyde, K.D. (2016a) Botryosphaeriaceae: current status of genera and species. Mycosphere 7: 1001–1073. https://doi.org/10.5943/mycosphere/si/1b/13
  44. Douanla-Meli, C. & Scharnhorst, A. (2021) Palm foliage as pathways of pathogenic Botryosphaeriaceae fungi and host of new Lasiodiplodia species from Mexico. Pathogens 10: 1297. https://doi.org/10.3390/pathogens10101297
  45. Dugan, F.M., Lupien, S.L., Osuagwu, A.N., Uyoh, E.A., Okpako, E. & Kisha, T. (2016) New records of Lasiodiplodia theobromae in seeds of Tetrapleura tetraptera from Nigeria and fruit of Cocos nucifera from Mexico. Journal of Phytopathology 164: 65–68. https://doi.org/10.1111/jph.12384
  46. Elliot, M.L., Morales, A.D. & Des Jardin, E.A. (2018) New records of Botryosphaeriaceae genera associated with palms in Florida, USA. Sydowia 70: 169–178. https://doi.org/10.12905/0380.sydowia70-2018-0169
  47. Farr, D.F. & Rossman, A.Y. (2023) Fungal Databases, US National Fungus Collections, ARS, USDA. Available from: https://nt.ars-grin.gov/fungaldatabases/ (accessed on 15th February 2023).
  48. Ferreira, S.L., Stauder, C.M., Martin, D.K.H. & Kasson, M.T. (2021) Morphological and phylogenetic resolution of Diplodia corticola and D. quercivora, emerging canker pathogens of oak (Quercus spp.), in the United States. Plant Disease 105: 1298–1307. https://doi.org/10.1094/PDIS-05-20-0977-RE
  49. Fröhlich, J. & Hyde, K.D., (2000) Palm microfungi. Fungal Diversity Research Series 3: 1–393.
  50. Galarneau, E.R., Lawrence, D.P., Travadon, R. & Baumgartner, K. (2019) Drought exacerbates Botryosphaeria dieback symptoms in grapevines and confounds host-based molecular markers of infection by Neofusicoccum parvum. Plant Disease 103: 1738–1745. https://doi.org/10.1094/PDIS-09-18-1549-RE
  51. Garcia, J.F., Lawrence, D.P., Morales-Cruz, A., Travadon, R., Minio, A., Hernandez-Martinez, R., Rolshausen, P.E., Baumgartner, K. & Cantu, D. (2021) Phylogenomics of plant-associated Botryosphaeriaceae Species. Frontiers in Microbiology 12: 652802. https://doi.org/10.3389/fmicb.2021.652802
  52. Glass, N.L. & Donaldson, G.C. (1995) Development of primer sets designed for use with PCR to amplify conserved genes from filamentous ascomycetes. Applied and Environmental Microbiology 61: 1323–1330. https://doi.org/10.1128/aem.61.4.1323-1330.1995
  53. Guzmán, B., Fedriani, J.M., Delibes, M. & Vargas, P. (2017) The colonization history of the Mediterranean dwarf palm (Chamaerops humilis L., Palmae). Tree Genetics & Genomes 13: 24. https://doi.org/10.1007/s11295-017-1108-1
  54. Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95–98.
  55. Hattori, Y., Ando, Y. & Nakashima, C. (2021) Taxonomical re-examination of the genus Neofusicoccum in Japan. Mycoscience 62: 250–259. https://doi.org/10.47371/mycosci.2021.03.008
  56. Hrycan, J., Hart, M., Bowen, P., Forge, T. & Úrbez-Torres, J.R. (2020) Grapevine trunk disease fungi: their roles as latent pathogens and stress factors that favour disease development and symptom expression. Phytopathologia Mediterranea 59: 395–424. https://doi.org/10.14601/Phyto-11275
  57. Hyde, K.D., Bussaban, B., Paulus, B., Crous, P.W., Lee, S., Mckenzie, E.H.C., Photita, W. & Lumyong, S. (2007) Diversity of saprobic microfungi. Biodiversity and Conservation 16: 7–35. https://doi.org/10.1007/s10531-006-9119-5
  58. Hyde, K.D., Chaiwan, N., Norphanphoun, C., Boonmee, S., Camporesi, E., Chethana, K.W.T., Dayarathne, M.C., de Silva, N.I., Dissanayake, A.J., Ekanayaka, A.H., Hongsanan, S., Huang, S.K., Jayasiri, S.C., Jayawardena, R.S., Jiang, H.B., Karunarathna, A., Lin, C.G., Liu, J.K., Liu, N.G., Lu, Y.Z., Luo, Z.L., Maharachchikumbura, S.S.N., Manawasinghe, I.S., Pem, D., Perera, R.H., Phukhamsakda, C., Samarakoon, M.C., Senwanna, C., Shang, Q.J., Tennakoon, D.S., Thambugala, K.M. & Tibpromma, S. (2018) Mycosphere notes 169–224. Mycosphere 9: 271–430. https://doi.org/10.5943/mycosphere/9/2/8
  59. Hyde, K.D., Norphanphoun, C., Abreu, V.P., Bazzicalupo, A., Chethana, K.T., Clericuzio, M., Dayarathne, M.C., Dissanayake, A.J., Ekanayaka, A.H., He, M.Q., Hongsanan, S., Huang, S.K., Jayasiri, R.S., Jayawardena, R.S., Karunarathna, A., Konta, S., Kušan, I., Lee, H., Li, J., Lin, C.G., Liu, N.G., Lu, Y.Z., Luo, Z.L., Manawasinghe, I.S., Mapook, A., Perera, R.H., Phookamsak, R., Phukhamsakda, C., Siedlecki, I., Soares, A.M., Tennakoon, D.S., Tian, Q., Tibpromma, S., Wanasinghe, D.N., Xiao, Y.P., Yang, J., Zeng, X.Y., Abdel-Aziz, F.A., Li, W.J., Senanayake, I.C., Shang, Q.J., Daranagama, D.A., de Silva, N.I., Thambugala, K.M., Abdel-Wahab, M.A., Bahkali, A.H., Berbee, M.L., Boonmee, S., Bhat, D.J., Bulgakov, T.S., Buyck, B., Camporesi, E., Castañeda-Ruiz, R.F., Chomnunti, P., Doilom, M., Dovana, F., Gibertoni, T.B., Jadan, M., Jeewon, R., Jones, E.B.G., Kang, J.C., Karunarathna, S.C., Lim, Y.W., Liu, J.K., Liu, Z.Y., Plautz, H.L. Jr, Lumyong, S., Maharachchikumbura, S.S.N., Matočec, N., McKenzie, E.H.C., Mešić, A., Miller, D., Pawlowska, J., Pereira, O.L., Promputtha, I., Romero, A.I., Ryvarden, L., Su, H.Y., Suetrong, S., Tkalčec, Z., Vizzini, A., Wen, T.C., Wisitrassameewong, K., Wrzosek, M., Xu, J.C., Zhao, Q., Zhao, R.L. & Mortimer, P.E. (2017) Fungal diversity notes 603–708: taxonomic and phylogenetic notes on genera and species. Fungal Diversity 87: 1–235. https://doi.org/10.1007/s13225-017-0391-3
  60. Index Fungorum Partnership (2023) Index Fungorum. Available from: http://www.indexfungorum.org/ (accessed on 15th February 2023).
  61. Jami, F., Slippers, B., Wingfield, M.J. & Gryzenhout, M. (2014) Botryosphaeriaceae species overlap on four unrelated, native South African hosts. Fungal Biology 118: 168–179. https://doi.org/10.1016/j.funbio.2013.11.007
  62. Jayasiri, S.C., Hyde, K.D., Jones, E.B.G., McKenzie, E.H.C., Jeewon, R., Phillips, A.J.L., Bhat, D.J., Wanasinghe, D.N., Liu, J.K., Lu, Y.Z., Kang, J.C., Xu, J. & Karunarathna, S.C. (2019) Diversity, morphology and molecular phylogeny of Dothideomycetes on decaying wild seed pods and fruits. Mycosphere 10: 1–186 . https://doi.org/10.5943/mycosphere/10/1/1
  63. Kirkness, C.M., Seal, D.V., Clayton, Y.M. & Punithalingam, E. (1991) Keratomycosis due to Sphaeropsis subglobosa – first reported case. Cornea 10: 85–89.
  64. Konta, S., Hongsanan, S., Phillips, A.J.L., Jones, E.B.G., Boonmee, S. & Hyde, K.D. (2016a) Botryosphaeriaceae from palms in Thailand II – two new species of Neodeightonia, N. rattanica and N. rattanicola from Calamus (rattan palm). Mycosphere 7: 950–961. https://doi.org/10.5943/mycosphere/si/1b/6
  65. Konta, S., Phillips, A.J.L., Bahkali, A.H., Jones, E.B.G., Eungwanichayapant, D.P., Hyde, K.D. & Boonmee, S. (2016b) Botryosphaeriaceae from palms in Thailand – Barriopsis archontophoenicis sp. nov., from Archontophoenix alexandrae. Mycosphere 7: 921–932. https://doi.org/10.5943/mycosphere/si/1b/1
  66. Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, K. (2018) MEGA X: Molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution 35: 1547–1549. https://doi.org/10.1093/molbev/msy096
  67. Laveau, C., Letouze, A., Louvet, G., Bastien, S. & Guerin-Dubrana, L. (2009) Differential aggressiveness of fungi implicated in esca and associated diseases of grapevine in France. Phytopathologia Mediterranea 48: 32–46.
  68. https://doi.org/10.14601/Phytopathol_Mediterr-2873
  69. Lawrence, D.P., Hand, F.P., Gubler, W.D. & Trouillas, F.P. (2017) Botryosphaeriaceae species associated with dieback and canker disease of bay laurel in northern California with the description of Dothiorella californica sp. nov. Fungal Biology 121: 347–360. https://doi.org/10.1016/j.funbio.2016.09.005
  70. Lawrence, D.P., Travadon, R. & Baumgartner, K. (2018) Novel seimatosporium species from grapevine in northern California and their interactions with fungal pathogens involved in the trunk-disease complex. Plant Dis. 102, 1081–1092. https://doi.org/10.1094/PDIS-08-17-1247-RE
  71. Lazzizera, C., Frisullo, S., Alves, A., Lopes, J. & Phillips, A.J.L. (2008) Phylogeny and morphology of Diplodia species on olives in southern Italy and description of Diplodia olivarum sp. nov. Fungal Diversity 31: 63–71.
  72. Lee, S.Y., Ten, N., Ayim, B.Y., Fulbert, O.N., Das, K. & Jung, H.Y. (2021) Diplodia parva sp. nov., a novel species of the family Botryosphaeriaceae isolated from soil in Korea. Phytotaxa 514: 105–117. https://doi.org/10.11646/phytotaxa.514.2.2
  73. Li, G., Slippers, B., Wingfield, M.J. & Chen, S. (2020) Variation in Botryosphaeriaceae from Eucalyptus plantations in YunNan Province in southwestern China across a climatic gradient. IMA Fungus 11: 22. https://doi.org/10.1186/s43008-020-00043-x
  74. Ligoxigakis, E.K., Markakis, E.A., Papaioannou, I.A. & Typas, M.A. (2013) First report of palm rot of Phoenix spp. caused by Neodeightonia phoenicum in Greece. Plant Disease 97: 286. https://doi.org/10.1094/PDIS-08-12-0727-PDN
  75. Linaldeddu, B.T., Alves, A. & Phillips, A.J.L. (2016) Sardiniella urbana gen. et sp. nov., a new member of the Botryosphaeriaceae isolated from declining Celtis australis trees in Sardinian streetscapes. Mycosphere 7: 893–905. https://doi.org/10.5943/mycosphere/si/1b/5
  76. Linaldeddu, B.T., Franceschini, A., Alves, A. & Phillips, A.J.L. (2013) Diplodia quercivora sp. nov.: a new species of Diplodia found on declining Quercus canariensis trees in Tunisia. Mycologia 105: 1266–1274. https://doi.org/10.3852/12-370
  77. Liu, J.-K., Chomnunti, P., Cai, L., Phookamsak, R., Chukeatirote, E., Jones, E.B.G., Moslem, M. & Hyde, K.D. (2010) Phylogeny and morphology of Neodeightonia palmicola sp. nov. from palms. Sydowia 62: 261–276.
  78. Liu, J.K., Phookamsak, R., Doilom, M., Wikee, S., Li, Y.M., Ariyawansha, H.A., Boonmee, S., Chomnunti, P., Dai, D.Q., Bhat, D.J., Romero, A.I., Zhuang, W.Y., Monkai, J., Jones, E.B.G., Chukeatirote, E., Ko, T.W.K., Zhao, Y.C., Wang, Y. & Hyde, K.D. (2012) Towards a natural classification of Botryosphaeriales. Fungal Diversity 57: 149–210. https://doi.org/10.1007/s13225-012-0207-4
  79. Lopes, A., Barradas, C., Phillips, A.J.L. & Alves, A. (2016) Diversity and phylogeny of Neofusicoccum species occurring in forest and urban environments in Portugal. Mycosphere 7: 906–920. https://doi.org/10.5943/mycosphere/si/1b/10
  80. Luo, Y., Lichtemberg, P.S.F., Niederholzer, F.J.A., Lightle, D.M., Felts, D.G. & Michailides, T.J. (2019) Understanding the process of latent infection of canker-causing pathogens in stone fruit and nut crops in California. Plant Disease 103: 2374–2384. https://doi.org/10.1094/PDIS-11-18-1963-RE
  81. Luque, J., Martos, S. & Phillips, A.J. (2005) Botryosphaeria viticola sp. nov. on grapevines: a new species with a Dothiorella anamorph. Mycologia 97: 1111–1121. https://doi.org/10.1080/15572536.2006.11832759
  82. Ma, Z., Boehm, E.W., Luo, Y. & Michailides, T.J. (2001) Population structure of Botryosphaeria dothidea from pistachio and other hosts in California. Phytopathology 91: 665–672. https://doi.org/10.1094/PHYTO.2001.91.7.665
  83. Manawasinghe, I.S., Phillips, A.J.L., Hyde, K.D., Chethana, K.W.T., Zhang, W., Zhao, W.S., Yan, J.Y. & Li, X.H. (2016) Mycosphere essays 14: assessing the aggressiveness of plant pathogenic Botryosphaeriaceae. Mycosphere 7: 883–892. https://doi.org/10.5943/mycosphere/si/1b/7
  84. Marincowitz, S., Groenewald, J.Z., Wingfield, M.J. & Crous, P.W. (2008) Species of Botryosphaeriaceae occurring on Proteaceae. Persoonia 21: 111–118. http://dx.doi.org/10.3767/003158508X372387
  85. Marin-Felix, Y., Groenewald, J.Z., Cai, L., Chen, Q., Marincowitz, S., Barnes, I., Bensch, K., Braun, U., Camporesi, E., Damm, U., de Beer, Z.W., Dissanayake, A., Edwards, J., Giraldo, A.M., Hernandez-Restrepo, M., Hyde, K.D., Jayawardena, R.S., Lombard, L., Luangsa-ard, J., McTaggart, A.R., Rossman, A.Y., Sandoval-Denis, M., Shen, M., Shivas, R.G., Tan, Y.P., van der Linde, E.J., Wingfield, M.J., Wood, A.R., Zhang, J.Q., Zhang, Y. & Crous, P.W. (2017) Genera of phytopathogenic fungi: GOPHY 1. Studies in Mycology 86: 99–216. https://doi.org/10.1016/j.simyco.2017.04.002
  86. Marsberg, A., Kemler, M., Jami, F., Nagel, J.H., Smidt, A.P., Naidoo, S., Wingfield, M.J., Crous, P.W., Spatafora, J.W., Hesse, C.N., Robbertse, B. & Slippers, A.B. (2017) Botryosphaeria dothidea: a latent pathogen of global importance to woody plant health. Molecular Plant Pathology 18: 477–488. https://doi.org/10.1111/mpp.12495
  87. Mehl, J., Slippers, B., Roux, J., Wingfield, M., Gonthier, P. & Nicolotti, G. (2013) Cankers and other diseases caused by the Botryosphaeriaceae. In: Gonthier, P. & Nicolotti, G. (Eds.) Infectious Forest Diseases. CAB International, England, pp. 298–317. https://doi.org/10.1079/9781780640402.0298
  88. Mehl, J.W., Slippers, B., Roux, J. & Wingfield, M.J. (2017) Overlap of latent pathogens in the Botryosphaeriaceae on a native and agricultural host. Fungal Biology 121: 405–419. http://dx.doi.org/10.1016/j.funbio.2016.07.015
  89. Melo, M.P., Beserra Jr., J.E.A., Matos, K.S., Moreira, S.I. & Pereira, O.L. (2017) First report of Lasiodiplodia theobromae causing stipe canker on ornamental palm (Dypsis lutescens) in Brazil. Plant Disease 101: 631–632. https://doi.org/10.1094/PDIS-08-16-1188-PDN
  90. Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. IEEE Computer Society, Los Alamitos, pp. 1–8. https://doi.org/10.1109/GCE.2010.5676129
  91. Mohammadi, H. (2014) Phaeoacremonium spp. and Botryosphaeriaceae spp. associated with date palm (Phoenix dactylifera L.) decline in Iran. Journal of Phytopathology 162: 575–581. https://doi.org/10.1111/jph.12229
  92. Montagne, J.F.C. (1834) Notice sur les plantes cryptogames récemment découvertes en France contenant aussi l’indication précis des localités de quelques espèces les plus rares de la flore française. Annales des Sciences Naturelles Seconde Série Botanique 1: 295–307.
  93. Mukhtar, I., Quan, X., Khokhar, I., Chou, T., Huang, Q., Jiang, S., Yan, J., Chen, B., Huang, R., Ashraf, H.J., Wen, Z. & Xie, B. (2019) First report of leaf spot on Caryota mitis (fishtail palm) caused by Neodeightonia palmicola in China. Plant Disease 103: 2675–2676. https://doi.org/10.1094/PDIS-12-18-2174-PDN
  94. Nishad, R. & Ahmed, T.A. (2020) Survey and identification of date palm pathogens and indigenous biocontrol agents. Plant Disease 104: 2498–2508. https://doi.org/10.1094/PDIS-12-19-2556-RE
  95. O’Donnell, K. (1993) Fusarium and its near relatives. In: Reynolds, D.R. & Taylor, J.W. (Eds.) The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics. CAB International, England, pp. 225–233.
  96. O’Donnell, K. & Cigelnik, E. (1997) Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Molecular Phylogenetics and Evolution 7: 103–116. https://doi.org/10.1006/mpev.1996.0376
  97. Old, K.M., Gibbs, R., Craig, I., Myers, B.J. & Yuan, Z.Q. (1990) Effect of drought and defoliation on the susceptibility of Eucalyptus to cankers caused by Endothia gyrosa and Botryosphaeria ribis. Australian Journal of Botany 38: 571–581. https://doi.org/10.1071/BT9900571
  98. Pavlic, D., Slippers, B., Coutinho, T.A. & Wingfield, M.J. (2009) Molecular and phenotypic characterization of three phylogenetic species discovered within the Neofusicoccum parvum/N. ribis complex. Mycologia 101: 636–647. https://doi.org/10.3852/08-193
  99. Pavlic-Zupanc, D., Wingfeld, M.J., Boissin, E. & Slippers, B. (2015) The distribution of genetic diversity in the Neofusicoccum parvum/N. ribis complex suggests structure correlated with level of disturbance. Fungal Ecology 13: 93–102. http://dx.doi.org/10.1016/j.funeco.2014.09.002
  100. Pereira, D.S. & Phillips, A.J.L. (2021) Two new Morinia species from palms (Arecaceae) in Portugal. Mycological Progress 20: 83–94. https://doi.org/10.1007/s11557-020-01650-z
  101. Pérez, C.A., Wingfield, M.J., Slippers, B., Altier, N.A. & Blanchette, R.A. (2010) Endophytic and canker-associated Botryosphaeriaceae occurring on non-native Eucalyptus and native Myrtaceae trees in Uruguay. Fungal Diversity 41: 53–69. https://doi.org/10.1007/s13225-009-0014-8
  102. Petrini, O. & Fisher, P.J. (1988) A comparative study of fungal endophytes in xylem and whole stem of Pinus sylvestris and Fagus sylvatica. Transactions of the British Mycological Society 91: 233–238. https://doi.org/10.1016/S0007-1536(88)80210-9
  103. Phillips, A., Alves, A., Abdollahzadeh, J., Slippers, B., Wingfield, M., Groenewald, J. & Crous, P. (2013) The Botryosphaeriaceae: genera and species known from culture. Studies in Mycology 76: 51–167. https://doi.org/10.3114/sim0021
  104. Phillips, A.J., Hyde, K.D., Alves, A. & Liu, J.K. (2019) Families in Botryosphaeriales: a phylogenetic, morphological and evolutionary perspective. Fungal Diversity 94: 1–22. https://doi.org/10.1007/s13225-018-0416-6
  105. Phillips, A.J., Lopes, J., Abdollahzadeh, J., Bobev, S. & Alves, A. (2012) Resolving the Diplodia complex on apple and other Rosaceae hosts. Persoonia 29: 29–38. https://doi.org/10.3767/003158512X658899
  106. Phillips, A.J.L. & Alves, A. (2009) Taxonomy, phylogeny, and epitypification of Melanops tulasnei, the type species of Melanops. Fungal Diversity 38: 155-166.
  107. Phillips, A.J.L., Alves, A., Correia, A. & Luque, J. (2005) Two new species of Botryosphaeria with brown, 1-septate ascospores and Dothiorella anamorphs. Mycologia 97: 513–529. https://doi.org/10.3852/mycologia.97.2.513
  108. Phillips, A.J.L., Alves, A., Pennycook, S.R., Johnston, P.R., Ramaley, A, Akulov, A. & Crous, P.W. (2008) Resolving the phylogenetic and taxonomic status of dark-spored teleomorph genera in the Botryosphaeriaceae. Persoonia 21: 29–55. https://doi.org/10.3767/003158508X340742
  109. Phukhamsakda, C., Nilsson, R.H., Bhunjun, C.S., de Farias, A.R.G., Sun, Y.R., Wijesinghe, S.N., Raza, M., Bao, D.F., Lu, L., Tibpromma, S., Dong, W., Tennakoon, D.S., Tian, X.‑G., Xiong, Y.‑R., Karunarathna, S.C., Cai, L., Luo, Z.‑L., Wang, Y., Manawasinghe, I.S., Camporesi, E., Kirk, P.M., Promputtha, I., Kuo, C.‑H., Su, H.‑Y., Doilom, M., Li, Y., Fu, Y.‑P. & Hyde, K.D. (2022) The numbers of fungi: contributions from traditional taxonomic studies and challenges of metabarcoding. Fungal Diversity 114: 327–386. https://doi.org/10.1007/s13225-022-00502-3
  110. Pitcher, D.G., Saunders, N.A. & Owen, R.J. (1989) Rapid extraction of bacterial genomic DNA with guanidium thiocyanate. Letters in Applied Microbiology 8: 151–156. https://doi.org/10.1111/j.1472-765X.1989.tb00262.x
  111. Pitt, W.M., Úrbez-Torres, J.R. & Trouillas, F.P. (2015) Dothiorella and Spencermartinsia, new species and records from grapevines in Australia. Australasian Plant Pathology 44: 43–56. https://doi.org/10.1007/s13313-014-0332-5
  112. Punithalingam, E. (1969) Studies on Sphaeropsidales in culture. Mycological Papers 119: 1–24.
  113. Rambaut, A. (2018) FigTree v1.4.4. Available from: http://tree.bio.ed.ac.uk/software/figtree/ (accessed 1 February 2023)
  114. Rathnayaka, A.R., Chethana, K.W.T., Pasouvang, P. & Phillips, A.J.L. (2022a) Morphology and muti-gene phylogenetic analyses reveal Dothiorella chiangmaiensis sp. nov. (Botryosphaeriaceae, Botryosphaeriales) from Thailand. Current Research in Environmental & Applied Mycology 12: 322–332. https://doi.org/10.5943/cream/12/1/19
  115. Rathnayaka, A.R., Chethana, K.W.T., Phillips, A.J.L. & Jones, E.B.G. (2022b) Two new species of Botryosphaeriaceae (Botryosphaeriales) and new host/geographical records. Phytotaxa 564: 8–38. https://doi.org/10.11646/phytotaxa.564.1.2
  116. Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539–542. https://doi.org/10.1093/sysbio/sys029
  117. Rosado, A.W.C., Machado, A.R., Freire, F.C.O. & Pereira, O.L. (2016) Phylogeny, identification, and pathogenicity of Lasiodiplodia associated with postharvest stem-end rot of coconut in Brazil. Plant Disease 100: 561–568. https://doi.org/10.1094/PDIS-03-15-0242-RE
  118. Saccardo, P.A. (1880) Conspectus genera fungorum Italiae inferiorum nempe ad Sphaeropsideas, Melanconieas et Hyphomyceteas pertinentium systemate sporologico dispositorum. Michelia 2: 1–38.
  119. Sakalidis, M.L., Hardy, G.E.St.J. & Burgess, T.I. (2011) Use of the Genealogical Sorting Index (GSI) to delineate species boundaries in the Neofusicoccum parvum-Neofusicoccum ribis species complex. Molecular Phylogenetics and Evolution 60: 333–344. https://doi.org/10.1016/j.ympev.2011.04.026
  120. Sakalidis, M.L., Slippers, B., Wingfield, B.D., Hardy, G.E.S.J. & Burgess, T.I. (2013) The challenge of understanding the origin, pathways and extent of fungal invasions: global populations of the Neofusicoccum parvum/N. ribis species complex. Diversity and Distributions 19: 873–1094. https://doi.org/10.1111/ddi.12030
  121. Santos, P.H.D., Carvalho, B.M., Aredes, F.A.S., Mussi-Dias, V., Pinho, D.B., Pereira, M.G. & da Silveira, S.F. (2020) Is Lasiodiplodia theobromae the only species that causes leaf blight disease in Brazilian coconut palms?. Tropical Plant Pathology 45: 434–442. https://doi.org/10.1007/s40858-020-00344-x
  122. Sarr, M.P., Ndiaya, M., Groenewald, J.Z. & Crous, P.W. (2014) Genetic diversity in Macrophomina phaseolina, the causal agent of charcoal rot. Phytopathologia Mediterranea 53: 250–268. https://doi.org/10.14601/Phytopathol_Mediterr-13736
  123. Schoch, C.L., Shoemaker, R.A., Seifert, K.A., Hambleton, S., Spatafora, J.W. & Crous, P.W. (2006) A multigene phylogeny of the Dothideomycetes using four nuclear loci. Mycologia 98: 1041–1052. https://doi.org/10.3852/mycologia.98.6.1041
  124. Shabong, K. & Kayang, H. (2022) First report of Neodeightonia subglobosa causing leaf rot disease of betel leaf (Piper betle) in India. New Disease Reports 46: e12140. https://doi.org/10.1002/ndr2.12140
  125. Si, Y.Z., Sun, J.W., Wan, Y., Chen, Y.N., He, J., Li, W.Z., Li, D.W. & Zhu, L.H. (2023) Neofusicoccum cryptomeriae sp. nov. and N. parvum cause stem basal canker of Cryptomeria japonica in China. Journal of Fungi 9: 1–16. https://doi.org/10.3390/jof9040404
  126. Slippers, B. & Wingfield, M.J. (2007) Botryosphaeriaceae as endophytes and latent pathogens of woody plants: diversity, ecology and impact. Fungal Biology Reviews 21: 90–106. https://doi.org/10.1016/j.fbr.2007.06.002
  127. Slippers, B., Boissin, E., Phillips, A.J.L., Groenewald, J.Z., Lombard, L., Wingfield, M.J., Postma, A., Burgess, T. & Crous, P.W. (2013) Phylogenetic lineages in the Botryosphaeriales: a systematic and evolutionary framework. Studies in Mycology 76: 31–49. https://doi.org/10.3114/sim0020
  128. Slippers, B., Burgess, T., Pavlic, D., Ahumada, R., Maleme, H., Mohali, S., Rodas, C. & Wingfield, M.J. (2009) A diverse assemblage of Botryosphaeriaceae infect Eucalyptus in native and non-native environments. Southern Forests: a Journal of Forest Science 71: 101–110. https://doi.org/10.2989/SF.2009.71.2.3.818
  129. Slippers, B., Crous, P.W., Denman, S., Coutinho, T.A., Wingfield, B.D., Wingfield, M.J. (2004) Combined multiple gene genealogies and phenotypic characters differentiate several species previously identified as Botryosphaeria dothidea. Mycologia 96: 83–101. https://doi.org/10.1080/15572536.2005.11833000
  130. Slippers, B., Crous, P.W., Jami, F., Groenewald, J.Z. &. Wingfield, M.J. (2017) Diversity in the Botryosphaeriales: Looking back, looking forward. Fungal Biology 121: 307–321. https://doi.org/10.1016/j.funbio.2017.02.002
  131. Slippers, B., Roux, J., Wingfield, M.J., van der Walt, F.J.J., Jami, F., Mehl, J.W.M. & Marais, G.J. (2014) Confronting the constraints of morphological taxonomy in the Botryosphaeriales. Persoonia 33: 155–168. http://dx.doi.org/10.3767/003158514X684780
  132. Slippers, B., Smit, W.A., Crous, P.W., Coutinho, T.A., Wingfield, B.D. & Wingfield, M.J. (2007) Taxonomy, phylogeny and identification of Botryosphaeriaceae associated with pome and stone fruit trees in South Africa and other regions of the world. Plant Pathology 56: 128–139. https://doi.org/10.1111/j.1365-3059.2006.01486.x
  133. Smith, H., Kemp, G.H.J. & Wingfield, M.J. (1994) Canker and die-back of eucalyptus in South Africa caused by Botryosphaeria dothidea. Plant Pathology 43: 1031–1034. https://doi.org/10.1111/j.1365-3059.1994.tb01653.x
  134. Stamatakis, A. (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312–1313. https://doi.org/10.1093/bioinformatics/btu033
  135. Stanosz, G.R., Smith, D.R., Fraedrich, S.W., Baird, R.E. & Mangini, A. (2009) Diplodia pinea, the cause of Diplodia blight of pines, confirmed in Alabama, Louisiana, and Mississippi. Plant Disease 93: 198. https://doi.org/10.1094/PDIS-93-2-0198C
  136. Sun, J.-E., Meng, C.-R., Phillips, A.J.L. & Wang, Y. (2022) Two new Botryosphaeria (Botryosphaeriales, Botryosphaeriaceae) species in China. MycoKeys 94: 1–16. https://doi.org/10.3897/mycokeys.94.91340
  137. Suwandi, Akino, S. & Kondo, N. (2012) Common spear rot of oil palm in Indonesia. Plant Disease 96: 537–543. https://doi.org/10.1094/PDIS-08-10-0569
  138. Taylor, J.E. & Hyde, K.D. (2003) Microfungi of tropical and temperate palms. Fungal Diversity Research Series 12: 1–495.
  139. Taylor, J.W., Jacobson, D.J., Kroken, S., Kasuga, T., Geiser, D.M., Hibbett, D.S. & Fisher, M.C. (2000) Phylogenetic species recognition and species concepts in fungi. Fungal Genetics and Biology 31: 21–32. https://doi.org/10.1006/fgbi.2000.1228
  140. Tennakoon, D.S., Kuo, C.H., Maharachchikumbura, S.S.N., Thambugala, K.M., Gentekaki, E., Phillips, A.J.L., Bhat, D.J., Wanasinghe, D.N., de Silva, N.I., Promputtha, I. & Hyde, K.D. (2021) Taxonomic and phylogenetic contributions to Celtis formosana, Ficus ampelas, F. septica, Macaranga tanarius and Morus australis leaf litter inhabiting microfungi. Fungal Diversity 108: 1–215. https://doi.org/10.1007/s13225-021-00474-w
  141. Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. & Higgins, D.G. (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 25: 4876–4882. https://doi.org/10.1093/nar/25.24.4876
  142. Trakunyingcharoen, T., Cheewangkoon, R., To-anun, C., Crous, P.W., van Niekerk, J.M. & Lombard, L. (2014) Botryosphaeriaceae associated with diseases of mango (Mangifera indica). Australasian Plant Pathology 43: 425–438. https://doi.org/10.1007/s13313-014-0284-9
  143. Trakunyingcharoen, T., Lombard, L., Groenewald, J.Z., Cheewangkoon, R., To-anun, C. & Crous, P.W. (2015) Caulicolous Botryosphaeriales from Thailand. Persoonia 34: 87–99. http://dx.doi.org/10.3767/003158515X685841
  144. Trapman, M., Maxin, P. & Weber, R.W.S. (2008) Ecofruit – 13th International Conference on Cultivation Technique and Phytopathological Problems in Organic Fruit-Growing. Weinsberg/Germany, pp. 177–181.
  145. Úrbez-Torres, J.R., Boulé, J. & O’Gorman, D.T. (2016) First report of Diplodia seriata and D. mutila causing apple dieback in British Columbia. Plant Disease 6: 1243–1244. https://doi.org/10.1094/PDIS-11-15-1358-PDN
  146. Úrbez-Torres, J.R., Peduto, F., Rooney-Latham, S. & Gubler, W.D. (2010) First report of Diplodia corticola causing grapevine (Vitis vinifera) cankers and trunk cankers and dieback of canyon live oak (Quercus chrysolepis) in California. Plant Disease 94: 785.
  147. van Niekerk, J.M., Strever, A.E., Toit, P.G.D. & Halleen, F. (2011) Influence of water stress on Botryosphaeriaceae disease expression in grapevines. Phytopathologia Mediterranea 50: 151–165. https://doi.org/10.14601/Phytopathol_Mediterr-8968
  148. von Arx, J.A. & Müller, E. (1975) A reevaluation of the bitunicate Ascomycetes with keys to families and genera. Studies in Mycology 9: 1–159.
  149. White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. & White, T.J. (Eds.) PCR protocols: a guide to methods and applications. Academic Press, San Diego, pp. 315–322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
  150. Wijayawardene, N.N., Hyde, K.D., Dai, D.Q., Sánchez-García, M., Goto, B.T., Saxena, R.K., Erdoðdu, M., Selçuk, F., Rajeshkumar, K.C., Aptroot, A., Błaszkowski, J., Boonyuen, N., da Silva, G.A., de Souza, F.A., Dong, W., Ertz, D., Haelewaters, D., Jones, E.B.G., Karunarathna, S.C., Kirk, P.M., Kukwa, M., Kumla, J., Leontyev, D.V., Lumbsch, H.T., Maharachchikumbura, S.S.N., Marguno, F., Martínez-Rodríguez, P., Mešić, A., Monteiro, J.S., Oehl, F., Pawłowska, J., Pem D, Pfliegler, W.P., Phillips, A.J.L., Pošta, A., He, M.Q., Li, J.X., Raza, M., Sruthi, O.P., Suetrong S, Suwannarach, N., Tedersoo, L., Thiyagaraja, V., Tibpromma, S., Tkalčec, Z., Tokarev, Y.S., Wanasinghe, D.N., Wijesundara, D.S.A., Wimalaseana, S.D.M.K., Madrid, H., Zhang, G.Q., Gao, Y., Sánchez-Castro, I., Tang, L.Z., Stadler, M., Yurkov, A. & Thines, M. (2022) Outline of Fungi and fungus-like taxa – 2021. Mycosphere 13: 53–453. https://doi.org/10.5943/mycosphere/13/1/2
  151. Wu, N., Dissanayake, A.J., Chethana, K.W.T. & Liu, J.-K. (2022) Neodeightonia septata sp. nov. and N. subglobosa (Botryosphaeriaceae) from northern Thailand. Phytotaxa 575: 129–139. https://doi.org/10.11646/phytotaxa.575.2.2
  152. Wunderlich, N., Ash, G.J., Steel, C.C., Raman, H., Cowling, A. & Savocchia, S. (2011) Refining the biological factors affecting virulence of Botryosphaeriaceae on grapevines. Annals of Applied Biology 159: 467–477. https://doi.org/10.1111/j.1744-7348.2011.00508.x
  153. Wyka, S.A. & Broders, K.D. (2016) The new family Septorioideaceae, within the Botryosphaeriales and Septorioides strobi as a new species associated with needle defoliation of Pinus strobus in the United States. Fungal Biology 8: 1030–1040. https://doi.org/10.1016/j.funbio.2016.04.005
  154. Xia, Y., Deng, X., Zhou, P., Shima, K. & Teixeira da Silva, J.A. (2006) The world floriculture industry: dynamics of production and markets. In: Teixeira da Silva, J.A. (Eds.) Floriculture, Ornamental and Plant Biotechnology Advances and Topical Issues. Global Science Books, England, pp. 336–347.
  155. Xiao, X.E., Wang, W., Crous, P.W., Wang, H.K., Jiao, C., Huang, F., Pu, Z.X., Zhu, Z.R. & Li, H.Y. (2021) Species of Botryosphaeriaceae associated with citrus branch diseases in China. Persoonia 47: 106–135. https://doi.org/10.3767/persoonia.2021.47.03
  156. Xiong, Y., Manawasinghe, I.S., Liao, C., Hyde, K.D. & Dong, Z. (2022) Neodeightonia arengae sp. nov., Botryosphaeriaceous taxa on Arenga tremula (Arecaceae) from Guangdong, China. Phytotaxa 530: 130–140. https://doi.org/10.11646/phytotaxa.530.2.1
  157. Xu, C., Zhang, H., Zhou, Z., Hu, T., Wang, S., Wang, Y. & Cao, K. (2015) Identification and distribution of Botryosphaeriaceae species associated with blueberry stem blight in China. European Journal of Plant Pathology 143: 737–752. https://doi.org/10.1007/s10658-015-0724-6
  158. Xu, X.L., Wang, F.H., Liu, C., Yang, H.B., Zeng, Z., Wang, B.X., Liu, Y.G. & Yang, C.L. (2022) Morphology and phylogeny of ascomycetes associated with walnut trees (Juglans regia) in Sichuan province, China. Frontiers in Microbiology 13: 1016548. https://doi.org/10.3389/fmicb.2022.1016548
  159. Yang, T., Groenewald, J.Z., Cheewangkoon, R., Jami, F., Abdollahzadeh, J., Lombard, L. & Crous, P.W. (2017) Families, genera and species of Botryosphaeriales. Fungal Biology 121: 322–346. https://doi.org/10.1016/j.funbio.2016.11.001
  160. You, C.J., Liu, X., Li, L.X., Tsui, C.K.M. & Tian, C.M. (2017) Dothiorella magnoliae, a new species associated with dieback of Magnolia grandiflora from China. Mycosphere 8: 1031–1041. https://doi.org/10.5943/mycosphere/8/2/6
  161. Zhang, S.-N., Hyde, K.D., Jones, E.B.G., Jeewon, R., Cheewangkoon, R. & Liu, J.-K. (2019a) Striatiguttulaceae, a new pleosporalean family to accommodate Longicorpus and Striatiguttula gen. nov. from palms. MycoKeys 49: 99–129. https://doi.org/10.3897/mycokeys.49.30886.
  162. Zhang, W. & Niu, X.L. (2019b) First report of Lasiodiplodia theobromae causing postharvest stem end rot on coconut in China. Plant Disease 103: 1420. https://doi.org/10.1094/PDIS-10-18-1861-PDN
  163. Zhang, W. & Song, X. (2022) Occurrence of leaf spot caused by Neodeightonia phoenicum on pygmy date palm (Phoenix roebelenii) in China. Plant Disease 106: 2269. https://doi.org/10.1094/PDIS-10-21-2190-PDN
  164. Zhang, W., Groenewald, J.Z., Lombard, L., Schumacher, R.K., Phillips, A.J.L. & Crous, P.W. (2021a) Evaluating species in Botryosphaeriales. Persoonia 46: 63–115. https://doi.org/10.3767/persoonia.2021.46.03
  165. Zhang, Y., Zhou, Y., Sun, W., Zhao, L., Pavlic-Zupanc, D., Crous, P.W., Slippers, B. & Dai, Y. (2021b) Toward a natural classification of Botryosphaeriaceae: a study of the type specimens of Botryosphaeria sensu lato. Frontiers in Microbiology 12: 737541. https://doi.org/10.3389/fmicb.2021.737541
  166. Zhu, H., Qin, W.-Q., Liu, L. & Yan, W. (2015) First report of leaf spot of clustering fishtail palm (Caryota mitis) caused by Lasiodiplodia jatrophicola in China. Plant disease 99: 1038. https://doi.org/10.1094/PDIS-10-14-1065-PDN
  167. Zlatković, M., Keča, N., Wingfield, M.J., Jami, F. & Slippers, B. (2016) Botryosphaeriaceae associated with the die-back of ornamental trees in the western balkans. Antonie van Leeuwenhoek 109: 543–564. https://doi.org/10.1007/s10482-016-0659-8
  168. Dong, W., Doilom, M., Hyde, K.D., Phillips, A., Yan, K., To-anun, C., Xu, J.C., Zhang, H. & Nalumpang, S. (2020) Pathogenicity of five Botryosphaeriaceae species isolated from Tectona grandis (teak): the pathogenic potential of Lasiodiplodia species. Asian Journal of Mycology 3: 399–407. https://doi.org/10.5943/ajom/3/1/12