STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REG_1960Putative transposase; Corrected polynucleotide track (1); COG1961; similar to AA sequence GI 13096079. (155 aa)    
Predicted Functional Partners:
REG_1980
Putative phage replication protein; Similar to AA sequence GI 51597448.
   
    0.815
REG_1985
Putative phage portal protein; COG5518; similar to AA sequence GI 170024550.
   
    0.757
REG_0766
Putative phage tail protein; Similar to AA sequence GI 77973284.
   
    0.743
REG_0170
Phage-related exonuclease; Similar to AA sequence GI 223990485.
   
    0.569
REG_1589
Putative transposase; COG4644; similar to AA sequence GI 167463255.
 
   
 0.544
REG_1959
Putative plasmid assoicated protein; Similar to AA sequence GI 190576838.
       0.478
Your Current Organism:
Regiella insecticola
NCBI taxonomy Id: 663321
Other names: C. Regiella insecticola LSR1, Candidatus Regiella insecticola LSR1, Candidatus Regiella insecticola str. LSR1, Candidatus Regiella insecticola strain LSR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.