antibiotics
Article
A New Antimicrobial Phenylpropanol from the Leaves of
Tabernaemontana inconspicua Stapf. (Apocynaceae) Inhibits
Pathogenic Gram-Negative Bacteria
Lidwine Ngah 1 , Willifred Dongmo Tékapi Tsopgni 1 , Judith Caroline Ngo Nyobe 2 , Alain Tadjong Tcho 3 ,
Moses K. Langat 4 , Jean Claude Ndom 1 , Eduard Mas-Claret 4 , Nicholas John Sadgrove 4 ,
Alain François Kamdem Waffo 1 and Methee Phumthum 4,5, *
1
2
3
4
5
Citation: Ngah, L.; Tsopgni, W.D.T.;
Nyobe, J.C.N.; Tcho, A.T.; Langat,
M.K.; Ndom, J.C.; Mas-Claret, E.;
Sadgrove, N.J.; Waffo, A.F.K.;
Phumthum, M. A New Antimicrobial
Phenylpropanol from the Leaves of
Tabernaemontana inconspicua Stapf.
(Apocynaceae) Inhibits Pathogenic
Gram-Negative Bacteria. Antibiotics
2022, 11, 121. https://doi.org/
10.3390/antibiotics11010121
Academic Editors: Roberta Colicchio
and Chiara Pagliuca
Received: 24 December 2021
Accepted: 13 January 2022
Published: 17 January 2022
*
Faculty of Sciences, Department of Chemistry, University of Douala, Douala P.O. Box 24157, Cameroon;
lidwingah@yahoo.fr (L.N.); willifred2kpi@yahoo.fr (W.D.T.T.); ndomjefr@yahoo.com (J.C.N.);
akamdemfr@yahoo.fr (A.F.K.W.)
Laboratory of Quality Control for Food, Pharmaceutical and Cosmetic Products, Department of Thermal
Engineering and Energy, University Institute of Technology, University of Douala,
Douala P.O. Box 8698, Cameroon; njudithcaroline@yahoo.fr
Department of Chemistry, Faculty of Sciences, University of Buea, Buea P.O. Box 63, Cameroon;
alainstone1@yahoo.fr
Royal Botanic Gardens, Kew, Kew Green, Richmond, Surrey TW9 3AE, UK; m.langat@kew.org (M.K.L.);
e.mas-claret@kew.org (E.M.-C.); n.sadgrove@kew.org (N.J.S.)
Department of Pharmaceutical Botany, Faculty of Pharmacy, Mahidol University, Bangkok 10400, Thailand
Correspondence: methee.phu@mahidol.edu
Abstract: A chemical investigation of the leaves of Tabernaemontana inconspicua Stapf. led to the
isolation of a new phenylpropanol derivative, namely irisdichototin G (1), together with nine known
compounds, including one polyol derivative, dambonitol (2); three alkaloids, 10-hydroxycoronaridine
(3), voacristine (4) and vobasine (5); two triterpenes lupeol (6), betulinic acid (7) and three sterols,
sitosterol (8), sitosterol-3-O-β-D-glucopyranoside (9) and stigmasterol (10). The structure of the new
compound, as well as those of the known ones, was established by means of spectroscopic methods:
NMR analysis (1H and 13 C NMR, 1H-1H-COSY, HSQC, HMBC and NOESY), high-resolution mass
spectrometry (HR-ESI-MS) and comparisons with previously reported data. Among the known compounds, compound 2 was firstly reported from the family Apocynaceae. Compounds 1–5 were tested
for their antimicrobial effects against three Gram-negative organisms associated with human wound
and systemic infections, namely Haemophilus influenzae 9435337A, Klebsiella pneumoniae 17102005 and
Pseudomonas aeruginosa 2137659B. Compounds 1, 3, and 5 showed significant antimicrobial effects with
minimum inhibitory concentrations (MIC) of 62.5 µg/mL, 62.5 µg/mL and 7.81 µg/mL, respectively,
against Haemophilus influenzae, whereas compounds 1 and 5 showed significant antimicrobial effects,
with a MIC value of 31.25 µg/mL against Pseudomonas aeruginosa. In addition, compound 3 showed
significant antimicrobial activity, with a MIC value of 31.25 µg/mL against Klebsiella pneumoniae.
Publisher’s Note: MDPI stays neutral
with regard to jurisdictional claims in
Keywords: Tabernaemontana inconspicua; Apocynaceae; alkaloids; antimicrobial; irisdichototin G
published maps and institutional affiliations.
1. Introduction
Copyright: © 2022 by the authors.
Licensee MDPI, Basel, Switzerland.
This article is an open access article
distributed under the terms and
conditions of the Creative Commons
Attribution (CC BY) license (https://
creativecommons.org/licenses/by/
4.0/).
Tabernaemontana is one out of 415 genera in the family Apocynaceae, distributed
throughout the tropical world, in some subtropical regions, and of course parts of Africa
and Asia. It consists of about 110 species, including the species of the current study, namely
Tabernaemontana inconspicua Stapf. [1], which is a shrub with green or yellow to orange
bark. The different organs from species in the genus Tabernaemontana are used in African
traditional medicine as local anesthetics, for aphrodisiac applications and as purgatives [2,3].
In scientific studies, the extracts from species in Tabernaemontana confer significant biological
effects across a wide range of bioassays, such as antioxidation, cytotoxicity, antimicrobial
Antibiotics 2022, 11, 121. https://doi.org/10.3390/antibiotics11010121
https://www.mdpi.com/journal/antibiotics
Antibiotics 2022, 11, 121
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and antiparasitic activities [2,4]. Many classes of secondary metabolites have been reported
from this genus, with alkaloids as their main class of compound. Some of these alkaloids
are coronaridine, 5,6-dioxo-11-hydroxy voacangine [5], ibogamine16-carboxylic acid-17,20didehydro-5,6-dioxo-10-methoxy-methyl ester [6], voacangine [7], and perakine [8]. The
roots and stem bark of T. inconspicua contain alkaloids, such as 5,6-dioxo-11-methoxy
voacangine and (-)-apparicine-21-one [9]. In addition, triterpenoids, steroids, and ceramides
were also reported [10]. In continued research of bioactive compounds from Central African
flora, the investigation focused on the leaves and isolated a new phenylpropanol derivative,
namely irisdichototin G (1) together with nine known compounds, including dambonitol
(2) reported for the first time from the family Apocynaceae.
Tabernaemontana inconspicua Stapf. is a shrub with green or yellow to orange bark. This
species is an Africa endemic that is currently distributed in almost all tropical countries [1].
It grows up to 15 m tall and 6 m wide. The plant has not been adequately studied for
its phytochemistry and biological activities. Only a few studies revealed that the plant
contains indole alkaloids, which have cytotoxic activities [10]. The aim of the study was to
elucidate the phytochemistry and antimicrobial activity of leaf extracts from T. inconspicua.
2. Materials and Methods
2.1. General Experimental Procedures
Thin-layer chromatography was performed using Merck TLC Silica gel 60 F254 or TLC
Silica gel 60 RP-18 F254S. UV light (254 nm and 354 nm) and/or a 10 % H2 SO4 stain were
used to visualize the spots on TLCs. Column chromatography was performed on silica gel
provided by Brunschwig (32–63 mesh, 60Å) prepacked columns. NMR measurements were
carried out on a Bruker Avance III HD 500 MHz spectrometer (1H : 500 MHz, 13 C: 125 MHz).
Deuterated solvents were obtained from Cambridge Isotope Laboratories. HRESI-MS was
performed on a MicrOTOF-Q mass spectrometer (Bruker, Germany). ESI-MS reaction
monitoring was carried out using a Bruker esquire HCT Ion trap mass spectrometer. IR
spectra were recorded on a Bruker FT-IR Tensor II using a Golden Gate diamond ATR
system. Optical rotations were measured on a Perkin Elmer Polarimeter 241 using the
sodium lamp (589 nm) and a 10 cm long cuvette. Microwave heating was performed
on a Biotage Initiator Microwave using Biotage microwave vials. UV/VIS spectra were
recorded on a UV/VIS Lambda 25,190–1100 nm. Irradiations were performed using
Rayonet photochemical reactors.
2.2. Plant Material
The leaves of T. inconspicua were collected in daylight during October 2019 at Nlong
locality (3◦ 31′ 10.8′′ N, 11◦ 6′ 11.89′′ E), in the Central region of Cameroon. The plant was
identified by Mr. Victor Nana, botanist at the National Herbarium of Cameroon, where a
specimen was deposited under the voucher number NHC 61026.
2.3. Extraction and Isolation
The air-dried and powdered leaves (1.4 kg) of T. inconspicua were soaked twice, using
methanol for 48 h and 24 h, respectively. The solvent was evaporated using a rotaryevaporator to afford crude extracts and a yield of 65.8 g was determined, of which a
portion was used in silica gel column chromatography. The mobile phase used ethyl acetate
(EtOAc) in hexane (Hex), following a gradient from 05:95 to 100:00 (v/v), respectively.
Then, 100 mL volumes were collected in chromatography and pooled based on their
TLC profiles into 7 sub-fractions (F1–F7). The mixture of β-sitosterol (8) and stigmasterol
(41.05 mg) (10) precipitated as a white powder after recrystallization of F2 (145.10 mg,
Hex–EtOAc (9:1, v/v)), as well as β-sitosterol-3-O-β-D-glucopyranoside (9) (92.40 mg) from
F7 (250.35 mg, Hex–EtOAc (3:7, v/v)). F1 (210.50 mg, Hex–EtOAc (19:1, v/v)) followed
the same treatment to give lupeol (6), whilst F3 (110.50 mg, Hex–EtOAc (17:3, v/v)) was
further chromatographed on silica gel with an isocratic solvent system of Hex–EtOAc
(9:1, v/v) to give betulinic acid (7) (11.25 mg). F4 (85.55 mg, Hex–EtOAc (8:2, v/v)) was
Antibiotics 2022, 11, 121
3 of 7
further chromatographed on sephadex LH-20 eluted with methanol to afford vobasine
(5) (17.30 mg). By the same means, 10-hydroxycoronaridine (3) (7.10 mg) and voacristine
(4) (6.10 mg) were obtained from F5 (145.20 mg, Hex–EtOAc (7:3, v/v)). In addition, F6
(35.40 mg, Hex–EtOAc (1:1, v/v)) was purified on silica gel column chromatography with
an isocratic elution using the solvent system of Hex–EtOAc (3:2, v/v) to afford compound 1
(10.60 mg) and dambonitol (2) (15.80 mg).
2.4. Spectroscopy Data of Compound 1
(1β, 2β)-1-(3-Hydroxy-4-methoxyphenyl)propane-1,2,3-triol with the given name irisdichototin G: brown oil; HRESIMS at m/z 237.0731 [M+Na]+ (calc. For C10 H14 O5 Na m/z
237.0720). 1H and 13 C NMR data; see Table 1.
Table 1.
1H
(500 MHz) and 13 C NMR (125 MHz) data for compound (1) in MeOD.
Position
δC
δH (Mult.; J)
1
2
3
1′
2′
3′
4′
5′
6′
CH3O-
74.1
76.2
62.9
104.0
110.2
133.5
147.4
114.3
119.2
55.0
4.54 (1H, d, J = 6.2)
3.69 (1H, m)
3.69 (1H, m)3.50 (1H, m)
/
7.02 (1H, d, J = 2.0)
/
/
6.71 (1H, dd, J = 8.0 ; 2.0)
6.80 (1H, d, J = 8.0)
3.88 (1H, m)
2.5. Antimicrobial Effects
Compounds 1–5 and the crude extract were tested for their antimicrobial effects against
Haemophilus influenzae 9435337A, Klebsiella pneumoniae 17102005 and Pseudomonas aeruginosa
2137659B. The organisms were chosen based on their roles in human infection, and because
they are Gram-negative. The latter is to represent pathogens that are otherwise poorly
represented in antimicrobial research of natural products. The method followed the alamar
blue method described by Collins and Franzblau [11], with Levofloxacin as a positive
control and no treatment as the negative control. Briefly, a two-fold serial broth dilution
was conducted in a 96-well microtiter plate, with a starting concentration of 250 µg·mL−1
and diluting across 10 wells. The plate was inoculated (giving final concentrations of
treatments at 250–0.5 µg·mL−1 ) and organisms were grown overnight and then stained
using the alamar blue reagent, with the appearance of indigo as an indicator of growth,
and no color as no growth. The MIC and MBC values are presented as an average of
three replicates.
3. Results and Discussion
Compound 1 (Figure 1) was obtained as a brown oil and gave a positive ferric chloride
test, indicating its phenolic nature. Its molecular formula C10 H14 O5 , implying four degrees
of unsaturations, was determined from its HR-ESIMS spectrum, which showed, in positive
mode, the sodium adduct ion peak [M + Na]+ at m/z 237.0731 (calc. For C10 H14 O5 Na m/z
237.0720). The 1H NMR spectrum of 1 showed signals for an ABX system at δH 7.02 (1H, d,
J = 2.0), 6.80 (1H, dd, J = 8.0; 2.0) and 6.71 (1H, d, J = 8.0), indicating a 1,2,4-trisubstituted
benzene ring. In addition, it showed proton signals for oxymethines at δH 4.54 (1H, d,
J = 6.2) and δ3.69 (1H, m) and those of diasteriotopic protons of oxymethylene at δH 3.69
(1H, m) and δ3.50 (1H, m), suggesting the presence of the propane-1,2,3-triol moiety in
the structure of compound 1. Finally, it displayed a signal for a methoxyl group at δH
δ3.88 (3H, s). The 13 C NMR of compound 1 supported the presence of a benzene ring
with the corresponding carbon signals at δC 119.2 (C-6′ ), 114.3 (C-5′ ), 110.2(C-2′ ), 147.4
(C-4′ ), 133.5 (C-3′ ) and 104.0 (C-1′ ); it also supported the presence of propane-1,2,3-triol
δH 4.54 ( , d, J = 6.2) and δ3.6
oxymethylene at δH 3.69 ( , m) and δ3.50 (
Antibiotics 2022, 11, 121
methoxyl group at δH δ3.88 (3
4 of 7
benzene ring with the corresponding carbon signals at δC 119.2 (C ′
′
′
′
′
′
triol with the carbon signals at δC 76.2 (C
oxymethynes
andsignals
δC 62.9at(C
with the carbon
δC 76.2 (C-2) and 74.1 (C-1) for the oxymethynes and δC 62.9
signal
for
a
methoxyl
group Furthermore,
at δC 55.0. The
HMBC aspect
(C-3) for the oxymethylene.
it showed
carbon signal for a methoxyl group
′ (δH
′
(δH
7.02),
H
′
(δH
6.80),
OCH3 (δH
3. 88) and
sameH-2
carbon
at δC 55.0. The HMBC spectrum showed cross correlation
between
the the
protons
′
′
′ (δC
which
allowed
of the C-4
methoxyl
group
at Callowed
′
7.02),
H-6147.4),
(δH 6.80),
OCH3
(δH 3.for
88)the
andplacement
the same carbon
(δC 147.4),
which
4
2 (δC
76.2), C
for the placement of the methoxyl group at C-41′ .atInδH
addition,
the correlation
between
the
3proton
(δC 62.9),
′ (δC
133.5)
C ′ C-2
(δC (δC
104 76.2), C-3 (δC 62.9), C-3′ (δC 133.5) and C-1′ (δC
H-1Cat δH
4.54
andand
carbons
104.0) allowed the′ placement of the propane-1,2,3-triol moiety at C-1′ . The third substituent
on the benzene ring was deduced as a hydroxyl group according to the molecular mass.
βThe
based
on theconfiguration
coupling constants
and deduced
the chemical
value
of the
benzylic
proton and
H
relative
of C-1 was
as βshift
based
on the
coupling
constants
1the
(δHchemical
4.54, d, J shift
= 6.2)value
[12] and
thatbenzylic
of C
of the
proton H-1 (δH 4.54, d, J = 6.2) [12] and that of
C-2, confirmed by a correlation between H-1 and H-2 in the NOESY spectrum for a cis
configuration (Figure 2). On the basis of all this evidence, the structure
of compound 1 was
(1β, 2β)
deduced ass (1β, 2β)-1-(3-hydroxy-4-methoxyphenyl)propane-1,2,3-triol with the given
name irisdichototin G.
Figure 1. Key 1H-1H COSY and HMBC correlations of compound 1.
Figure 2. Key NOESY correlation of compound 1.
The known compounds were identified as dambonitol (2) [13], three alkaloids, 10hydroxycoronaridine (3) [14], voacristine (4) [14] and vobasine (5) [14], two triterpenes
lupeol (6) [15] and betulinic acid (7) [16] and three sterols, sitosterol (8) [15], sitosterol-3-Oβ-D-glucopyranoside
(9) [15] and stigmasterol (10) [15] (Figure 3, Figures S1–S25)). Among
β
these compounds,
dambonitol (2) is reported for the first time in the family Apocynaceae.
–
However, the three alkaloids reported herein are consistent with the known chemistry
of Apocynaceae.
β
–
Antibiotics 2022, 11, 121
5 of 7
Figure 3. Chemical structures of compounds
– 1–10 from T. inconspicua.
Compounds–1–5 and the crude extract were tested for their antimicrobial effects
against Haemophilus influenzae 9435337A, Klebsiella pneumoniae 17102005 and Pseudomonas
aeruginosa 2137659B. The result (Table 2) showed that, from the crude extract, compounds 1,
3 and 5 exhibited significant antimicrobial effects with minimum inhibitory concentrations
(MIC) of 15.625
µg/mL,
62.5 µg/mL,
and
7.81μg/mL
µg/mL,
respectively,
against
concentrations
(MIC)
of 15.625
μg/mL,62.5
62.5µg/mL
μg/mL,
62.5
and
7.81 μg/mL,
ratio ≤ the
H. influenzae and a bactericidal effect each, with an MBC/MIC ratioMBC/MIC
≤ 4. In addition,
crude extract, compounds 1 and 5 showed significant antimicrobial effects with MIC values
effects
MIC 31.25
valuesµg/mL,
of 62.5 and
μg/mL,
μg/mL,
31.25against
μg/mL,P.respectively,
of 62.5with
µg/mL,
31.2531.25
µg/mL,
respectively,
aeruginosa and a
andwith
a bactericidal
effect
each,
an MBC/MIC
ratioextract
≤ 4. and
bactericidal effect each,
an MBC/MIC
ratio
≤ 4.with
Furthermore,
the crude
compound 3 showed significant antimicrobial effects with a MIC of 31.25 µg/mL against
with
a MIC of 31.25
against effect each, with an MBC/MIC ratio ≤ 4. Compounds 2
K. pneumoniae
and μg/mL
a bactericidal
and 4 were found to be inactive against the three strains. These results show that compound
3 may be the one responsible for the activity of the crude extract and the synergistic effect
of compound 3 by other compounds in the crude extract is not evident.
Table 2. Average inhibitory and bactericidal concentrations (MIC and MBC) of the crude extract and
compounds 1–5.
Inhibitory Parameters (µg/mL)
Haemophilus influenzae
9435337A
Samples
Crude Extract
1
2
3
4
5
Levofloxacin
Klebsiella pneumoniae
17102005
Pseudomonas aeruginosa 2137659B
MIC
MBC
MBC/MIC
MIC
MBC
MBC/MIC
MIC
MBC
MBC/MIC
15.625
62.5
>250
62.5
>250
7.81
1.95
62.5
125
>250
125
>250
31.25
7.81
4
2
ND
2
ND
4
4
31.25
125
>250
125
>250
31.25
0.48
125
250
>250
250
>250
125
1.95
4
2
ND
2
ND
4
4
62.5
31.25
>250
250
>250
31.25
0.48
125
>250
>250
>250
>250
125
1.95
2
ND
ND
ND
ND
4
4
ND: not determined; MIC = Minimum inhibitory concentration; MBC = Minimum bactericidal concentration; The
ratio MBC/MIC determine the bactericidal (MBC/MIC ≤ 4) or bacteriostatic (MBC/MIC > 4) effects of extracts.
The activity of plant extract and compounds will be classified as significant (MIC < 100 µg/mL), moderate
(100–625 µg/mL), or weak (MIC > 250 µg/mL).
Antibiotics 2022, 11, 121
6 of 7
In the research of natural products, it is more common to find compounds that are
active against Gram-positive organisms, such as Staphylococcus aureus, among others [17].
This is because the cell walls of Gram-negative organisms are fortified by a hydrophilic
periplasmic space that makes it difficult for lipophilic compounds to enter the cell. However,
in the current study, the compounds that were active had a moderately high polar head
space, caused by the presence of hydroxyl groups, which increase aqueous solubility
and the ability to traverse the cell walls of Gram-negative bacteria. Out of the active
compounds, two major chemical classes are represented, i.e., the phenylpropanoids, and
indole alkaloids (vinca and vobasan parent groups). This indicates the likelihood that
different mechanisms of activity are possible. The vinca alkaloids are associated with
a wide range of biological effects, but in the context of mammalian cells, they inhibit
microtubule formation and prevent successful mitosis [18], but this is unlikely to be related
to their mechanism in bacteria, since bacteria do not have nuclei. Hence, the mechanisms
need to be investigated independently. Regarding the phenylpropanoids, it is well known
that small aromatic compounds disrupt the cell wall barrier in both Gram-positive and
Gram-negative bacteria [19], so this should be investigated as a possible mechanism for
compound 1 of the current study.
4. Conclusions
This research led to the isolation of a new phenylpropanol derivative namely irisdichototin G (1) together with dambonitol (2). The latter is reported herein for the first time
in the family Apocynaceae. Three known alkaloids were also reported that are commonly
reported in Apocynaceae. Furthermore, compounds, 1, 3 and 5 showed significant antimicrobial effects against the Gram-negative organisms, Haemophilus influenzae 9435337A,
Klebsiella pneumoniae 17102005 and Pseudomonas aeruginosa 2137659B, with MIC values
ranging from 7.8 to 125 µg/mL and bactericidal effects ranging from two-fold to four-fold
differences to MIC values. The limitations of the current study are that the antimicrobial
effects can only be achieved if the extracts are applied topically, because the oral consumption of the plant cannot produce systemic concentrations high enough to meet the necessary
MIC concentrations. However, the study demonstrates that the extracts of this plant are
significant in the context of topical disinfection of Gram-negative bacteria.
Supplementary Materials: The following are available online at https://www.mdpi.com/article/10
.3390/antibiotics11010121/s1, Figures S1–S25: Mass spectra and NMR of all isolated compounds.
Author Contributions: Conceptualization, A.F.K.W., L.N., W.D.T.T., J.C.N., A.T.T., J.C.N.N. and M.P.;
methodology, L.N., W.D.T.T., J.C.N., A.T.T. and J.C.N.N.; formal analysis, E.M.-C., M.K.L. and N.J.S.;
writing—original draft preparation, L.N., W.D.T.T., J.C.N., A.T.T. and J.C.N.N.; writing—review
and editing, M.K.L., N.J.S. and M.P. All authors have read and agreed to the published version of
the manuscript.
Funding: This research received no external funding.
Data Availability Statement: Not applicable.
Acknowledgments: We are thankful to Victor Nana for supporting the plant taxonomic identification.
Conflicts of Interest: The authors declare no conflict of interest.
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