Cryptogam Biodiversity and Assessment
Kondratyuk et al.
Special Volume (2018), e-ISSN :2456-0251, 22-31
Upretia, a new caloplacoid lichen genus (Teloschistaceae, Lichen-Forming
Ascomycota) from India
Sergii Y. Kondratyuk1*, Per-Erik, Persson2, Mats Hansson2, Gaurav K. Mishra3, Sanjeeva Nayaka3, Dong Liu4,
Jae-Seoun Hur4 & Arne Thell5
1
M. H. Kholodny Institute of Botany, Tereshchenkivska str. 2, 01004 Kiev, Ukraine
Lund University, Department of Biology,The Biology Building, Sölvegatan 35, 22362 Lund, Sweden
3
CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow-226001 Uttar Pradesh, India
4
Korean Lichen Research Institute, Sunchon National University, Sunchon 540-742, South Korea
5
Lund University, Biological Museum, Botanical Collections, Box 117, SE-221 00 Lund, Sweden
2
Publication Info
Article history:
Received : 04.09.2017
Accepted : 11.12.2017
DOI: https://doi.org/10.21756/
cab.esp5
ABSTRACT
New genus Upretia S. Y. Kondr., A. Thell & J. S. Hur is characterized by partly pruinose, lobate
to subsquamulose, olivaceous grey to brown thallus, small ascospores and narrowly bacilliform
conidia. It belongs to the subfamily Caloplacoideae of the Teloschistaceae and includes the
‘Caloplaca’ amarkantakana clade. The new genus is closely related to Ioplaca Poelt according to
phylogeny analysis based on ITS1/ITS2 nrDNA, 28S nrLSU and 12S mtSSU sequences.
Key words:
Caloplacoideae, Ioplaca,
Molecular Phylogeny, New
Genus, Upretia
*Corresponding author:
Email: ksya_net@ukr.net
INTRODUCTION
MATERIAL AND METHODS
The subfamilies Caloplacoideae and Xanthorioideae
(family Teloschistaceae) were introduced by Gaya et al.
(2012) based on the multilocus molecular phylogeny of the
Teloschistales. Later on two more subfamilies Teloschistoideae and Brownlielloideae were proposed (Arup
et al. 2013b, Kondratyuk et al. 2015d). So far 97 genera are
suggested for Teloschistaceae and are distributed under
these four subfamilies (Kondratyuk et al. 2017).
Caloplacoideae is one of the major subfamilies comprises a
total of 26 genera of which 19 were described in recent years
(Arup et al. 2013a; Kondratyuk et al. 2014a, 2017) (Table 1).
In India Caloplacoideae comprises 74 species and 11 genera
(Blastenia, Caloplaca, Gyalolechia, Huneckia, Ioplaca,
Klauderuiella, Laundonia, Leproplaca, Oxneriopsis,
Pyrenodesmia, and Rufoplaca).
More than 1000 specimens belonging to various
herbaria have been examined in the present study using
standard microscopical techniques. The specimens were
collected during 2003-2016 and deposited in lichen
herbarium of CSIR-National Botanical Research Institute
(LWG); collected during 2014–2017 and deposited in the
herbarium of Korean Lichen Research Institute, Sunchon
National University, South Korea (KoLRI); duplicates in
the Hungarian Natural History Museum (BP) and the Lichen
Herbarium in the M. H. Kholodny Institute of Botany of
National Academy of Sciences of Ukraine (KW-L). Hand
cut sections are observed under a dissecting microscope
(Nikon SMZ 645; Nikon, Tokyo, Japan) while anatomical
characters were observed using a Nikon Eclipse E200
microscope and a Zeiss Scope, complemented with a digital
camera AxioCam ERc 5s. Sections of apothecia were tested
with water, K and IKI (10% potassium iodide).
In the present study revision of caloplacoid species
endemic to India is performed using molecular phylogeny
analysis. The internal transcribed spacer region (ITS1/ITS2
nr DNA), nuclear large subunit (28S nrLSU) and
mitochondrial small subunit (12S mtSSU) sequences are
utilized. Several new robust monophyletic clades were
revealed in phylogeny analyses of which one is identified
as the new genus Upretia.
Total DNA was extracted directly from the thalli
according to Ekman (1999) and was purified with DNeasy
Plant Mini Kit (QIAGEN, Germany). The nuclear ribosomal
RNA gene region including the internal transcribed spacers
1 and 2 and the 5.8S subunit (ITS) was amplified using the
primers ITS1F (Gardes and Bruns 1993) and ITS4 (White et
22
myresearchjournals.com
Cryptogam Biodiversity and Assessment
Table 1.
S.
No
List of genera of the subfamily Caloplacoideae and their species diversity confirmed by molecular phylogeny.
Genus name
Type species
Original generic description /recent
treatment
Species
diversity
1
Blastenia
Blastenia ferruginea
Kondratyuk et al. (2014a)
9
2
Bryoplaca
Bryoplaca sinapisperma
Arup et al. (2013a)
3
3
Caloplaca
Caloplaca cerina
Kondratyuk et al. (2014a)
9
4
Eilifdahlia
Eilifdahlia dahlii
Kondratyuk et al. (2014a)
4
5
Elenkiniana
Elenkiniana gloriae
Kondratyuk et al. (2014a)
3
6
Franwilsia
Franwilsia bastowii
Kondratyuk et al. (2014a)
3
7
Gintarasiella
Gintarasiella aggregata
Kondratyuk et al. (2017)
1
8
Gyalolechia
Gyalolechia aurea
Arup et al. (2013a)
9
9
Hanstrassia
Hanstrassia lenae
Kondratyuk et al. (2017)
2
10
Huneckia
Huneckia pollinii
Kondratyuk et al. (2014a)
3
11
Ioplaca
Ioplaca sphalera
Arup et al. (2013a)
1
[current name I. pindarensis]
12
Jasonhuria
Jasonhuria bogilana
Kondratyuk et al. (2015c)
1
13
Klauderuiella
Klauderuiella thallincola
Kondratyuk et al. (2017)
3
14
Laundonia
Laundonia flavovirescens
Kondratyuk et al. (2017)
1
15
Leproplaca
Leproplaca xantholyta
Arup et al. (2013a)
5
16
Mikhtomia
Mikhtomia gordejevii
Kondratyuk et al. (2014a)
5
17
Loekoesiana
Loekoesiana austrocoreana
Kondratyuk et al. (2015c)
1
18
Olegblumia
Olegblumia demissa
Kondratyuk et al. (2015c)
1
19
Opeltia
Opeltia neobaltistanica
Kondratyuk et al. (2017)
3
20
Pyrenodesmia
Pyrenodesmia chalybaea
Arup et al. (2013a)
6
21
Rufoplaca
Rufoplaca subpallida
Arup et al. (2013a)
5
22
Seirophora
Seirophora magara
Arup et al. (2013a)
4
[current name Seirophora villosa]
23
Usnochroma
Usnochroma carphinea
Arup et al. (2013a)
2
24
Variospora
Variospora velana
Arup et al. (2013a)
12
25
Xanthaptychia
Xanthaptychia orientalis
Kondratyuk et al. (2017)
5
26
Yoshimuria
Yoshimuria spodoplaca
Kondratyuk et al. (2014a)
3
Total
102
al. 1990), the 28S LSU using the primer LR5 (Vilgalys and
Hester 1990), and the 12S mtSSU using the primers mtSSU1mtSSU3R and mtSSU2R (Lohtander et al. 2002, Fedorenko
et al. 2009, 2012).
min at 94 °C was followed by 30 cycles of the following
steps: 30 seconds at 94 °C, 39 seconds at 57 °C and 1 min at
72 °C. Amplifications were ended with a final cycle at 72 °C
for 10 min. The same PCR program was used for all loci
studied. PCR products were then sent to the sequencing
facilities of the Genotech Cooperation, Seoul, South Korea,
The amplification was done using a Takara JP/TP600
PCR machine (Takara Bio Inc., Japan). One initial cycle of 5
23
Kondratyuk et al.
Upretia S. Y. Kondr., A. Thell & J. S. Hur gen. nov.
(Fig. 1)
for cleaning and sequencing. The sequencing was carried
out using the fluorescent marker Big Dye and an ABI 3730xl
sequencing machine (Applied Biosystems, Carlsbad, CA,
USA).
MycoBank No. 823059
Similar to Ioplaca but differs in a lobate and
subsquamulose thallus with dark brown to blackish brown
upper surface, in brownish cells in the upper cortical layer,
and in lecanorine sessile apothecia.
The consensus sequence was aligned with all related
species sequences retrieved from the GenBank database.
Sequence alignment was conducted in BioEdit and a
phylogenetic tree was generated by the maximum parsimony
(MP), minimum evolution (ME), and maximum likelihood
(ML) analysis methods. Analyses were conducted using
PAUP 4.0b10 on a Macintosh platform (Swofford 2003), and
in Mega 5.0 (Tamura et al. 2011) with the number of bootstrap
trials set to 1,000.
Type species: Upretia amarkantakana (Y. Joshi &
Upreti) S.Y. Kondr. & A. Thell.
Thallus crustose, more or less orbicular, lobate to
subsquamulose, central portion usually subsquamulose,
occasionally areolate to verruculose, olive-grey to brownish
grey to ash-grey; thalline lobes generally narrow to wider,
branched, flat to subconvex, with pruina. Cortical layer thin,
paraplectenchymatous, with uppermost cell layer consisting
of brownish cells, epinecral zone absent, medulla white.
Prothallus and hypothallus usually present, black.
RESULS AND DISCUSSION
The taxon sampling consists of 61 taxa of the
Caloplacoideae (Fig. 2) and Brigantiaea ferruginea is used
as outgroup. Five sequences of Upretia amarkantakana
were newly deposited into GenBank under the accession
numbers as in table 2. Phylogenetic analysis was performed
using the ITS1/ITS2 region and 28S LSU gene of nrDNA
and 12S SSU mtDNA sequences retrieved from the GenBank
database of which totally 135 sequences on nrDNA and
mtDNA were submitted to GenBank for 62 specimens of 39
taxa within our study (Table 2). The final alignment length
of ITS1/ITS2 nr DNA, 28S nrLSU and 12S mtSSU was
consequently 639, 787 and 1080 characters including gaps
with parsimony informative characters 362, 178 and 325
respectively. The total number of nucleotide positions in
the concatenated dataset used in the phylogenetic analysis
was 2081, of which 598 were parsimony informative. As it is
shown in the Fig. 2 our results of the three-locus phylogeny
suggest that Indian material belonging to the Caloplaca
amarkantakana is more closely related to the genus Ioplaca
than other genera of the Caloplaca clade of the subfamily
Caloplacoideae (Leproplaca, Klauderuiella and
Variospora). In our tree (Fig. 2) the new genus Upretia
formed supported sister relation (bootsrap 64) with Ioplaca
pindarensis. All the samples of Upretia amarkantakana
formed well-supported monophyletic lineage, while the
relation of the clade including the genera Upretia and
Ioplaca remains unressolved owing to scarse data on
Ioplaca.
Apothecia lecanorine, immersed when young,
becoming sessile, disc orange to brownish, concave or flat,
thalline margin concolorous with thallus, true exciple
paraplectecnhymatous; paraphyses with oil droplets; asci
8 spored, ascospores hyaline, polaribilocular, small. Conidia
narrowly bacilliform, small.
Chemistry: Thallus and thalline margin K-, C-, Pd-.
Apothecium disc and epihymenium K+ purple, C-, Pd-.
Parietin and an olive spot at RF class 4 present in apothecial
disc (Joshi & Upreti 2006).
Ecology: Occurring on exposed bouxite rocks at an altitude
of 500-600 m, growing together with species of the genera
Buellia and Staurothele.
Etymology: The genus is named after well known Indian
lichenologist, Dr. Dalip Kumar Upreti (*1958), Lucknow, India,
as a recognition for his enormous contributions to the recent
knowledge on Indian lichens.
Species diversity and distribution: Madhya Pradesh,
India.
Taxonomic notes: The genus Upretia is primarily
characterized by a partly pruinose, lobate to subsquamulose,
olivaceous grey to olivaceous brown thallus, brownish cells
in the uppermost cortical paraplectenchymatous layer, small
ascospores, and narrowly bacilliform conidia.
The genus Upretia is also positioned more distantly
from the genera of the Gyalolechia clade (i.e.: Gyalolechia,
Hanstrassia,, Laundonia, Mikhtomia, Opeltia, Oxneriopsis
etc.), as well as the Pyrenodesmia clade (i.e.: Bryoplaca,
Olegblumia, Seirophora, and Xanthaptychia)(Fig. 2).
The monotypic genus Ioplaca, occurring in the
eastern Hymalayas in Nepal, is the closest related group,
characterized by a dull yellow or yellow-brownish thallus,
subumbilicate areolae and cryptolecanorine, immersed
apothecia (Kärnefelt 1989). In the original publication Poelt
24
Cryptogam Biodiversity and Assessment
Table 2.
Specimens included in the phylogenetic analysis with GenBank accession numbers. Newly submitted sequences
are given in bold.
Species name
References / voucher details
ITS
LSU
Brigantiaea ferruginea
Kondratyuk et al. (2013); SK779, South Korea
KF264622
KF264684
Brigantiaea ferruginea
Kondratyuk et al. (2013); SK780, South Korea
KF264623
KF264685
Brigantiaea ferruginea
Kondratyuk et al. (2017); 121967, South Korea
KY614393
Brigantiaea ferruginea
Kondratyuk et al. (2017); 121971, South Korea
KY614394
Brigantiaea ferruginea
Kondratyuk et al. (2017); 121981, South Kore
KY614395
Blastenia ferruginea
Arup et al. (2013a), Spain
KC179416
Bryoplaca sinapisperma
Arup et al. (2013a), Norway
KC179421
KC179495
Caloplaca cerina
Fedorenko et al. (2009, 2012); FNM-185,
Ukraine
EU681284
EU680863
Caloplaca cerina
Gaya et al. (2012), U.S.A.
Caloplaca pelodella
Kondratyuk et al. (2013b); SK-714, South Korea
KF264629
Caloplaca stillicidiorum
Gaya et al. (2008), Cstil405, U.S.A.
EU639607
Eilifdahlia dahlii
Kondratyuk et al. (2014a); SK-956, Australia
KJ021221
KJ021252
KJ021277
Eilifdahlia dahlii
Kondratyuk et al. (2014a); SK-959, Australia
KJ021318
KJ021253
KJ021279
Eilifdahlia wirthii
Kondratyuk et al. (2014a); SK-262, Namibia
KJ021319
KJ021254
KJ021280
Elenkiniana ehrenbergii
Søchting and Figueras (2007), Israel
DQ888715
Elenkiniana gloriae
Kondratyuk et al. (2014a); SK-750, Hungary
KJ021323
Elenkiniana gloriae
Kondratyuk et al. (2014a); SK-611, Spain
KJ021321
KJ021256
KJ021282
Elenkiniana gloriae
Kondratyuk et al. (2014a); SK-613, Spain
KJ021322
Franwilsia bastowii
Kondratyuk et al. (2014a); SK-810, Australia
KJ021324
KJ021257
KJ021284
Franwilsia kilcundaensis
Kondratyuk et al. (2014a); SK-920, Australia
KJ021326
KJ021259
KJ021286
Franwilsia renatae
Kondratyuk et al. (2014a); SK-235, Namibia
KJ021329
Fulgensia cranfieldii
Kondratyuk et al. (2014a); SK-983, Australia
KJ021333
Fulgensia fulgens
Kondratyuk et al. (2014a); SK-735, Bulgaria
KJ021335
Gintarasiella aggregata
Kondratyuk et al. (2017); SK-A84, Australia ,
holotype
KY614390
KY614448
KY614479
Gintarasiella aggregata
Kondratyuk et al. (2017); SK-A85, Australia ,
isotype
KY614391
KY614449
KY614480
Gintarasiella aggregata
Kondratyuk et al. (2017); SK-A86, Australia ,
isotype
KY614392
KY614450
KY614481
Gyalolechia aurea
Arup et al. (2013a), Austria
KC179434
KC179196
KC179530
Gyalolechia canariensis
Gaya et al. (2008), Fcan3593, Spain
EU639587
Gyalolechia canariensis
Kondratyuk et al. (2014a); SK-583, Spain
KJ021332
Hanstrassia jaeseounhurii
Kondratyuk et al. (2017); China, holotype
KY614399
Hanstrassia lenae
Søchting and Figueras (2007), Russia
DQ888717
Hanstrassia lenae
Arup et al. (2013a), Russia
KC179442
Hanstrassia aff. lenae
Kondratyuk et al. (2017); SK-655, Russia
KY614401
Huneckia pollinii
Kondratyuk et al. (2014a); SK-3206, U.S.A.
KJ021336
KJ021265
KJ021296
Huneckia pollinii
Kondratyuk et al. (2014a); SK-870, U.S.A.
KJ021337
KJ021266
KJ021297
KC179163
mtSSU
KC179493
JQ301549
25
KF264689
KJ021283
KJ021289
KJ021262
KJ021292
KJ021295
KY614482
Kondratyuk et al.
Species name
References / voucher details
ITS
LSU
mtSSU
Huneckia rheinigera
Kondratyuk et al. (2014a); SK-3204, Australia
KJ021222
Ioplaca pindarensis
Gaya et al. (2012), China
JQ301672
Jasonhuria bogilana
Kondratyuk et al. (2015c); KoLRI 120454, South
Korea
KT220196
KT220205
KT220214
Jasonhuria bogilana
Kondratyuk et al. (2015c); KoLRI 120469, South
Korea
KT220197
KT220206
KT220215
Jasonhuria bogilana
Kondratyuk et al. (2015c); KoLRI 120641, South
Korea
KT220198
KT220207
KT220216
Klauderuiella aurantia
Arup et al. (2013a), Spain
KC179470
KC179261
KC179600
Klauderuiella aurantia
Gaya et al. (2008), Caur13326, Spain
EU639602
Klauderuiella aurantia
Gaya et al. (2015), Caur13326, Spain
Klauderuiella flavescens
Kondratyuk et al. (2017); SK-561, Spain
KY614416
KY614495
Klauderuiella thallincola
Kondratyuk et al. (2017); SK-527, the UK
KY614415
KY614494
Laundonia flavovirescens
Kondratyuk et al. (2017); SK-657, Russia
KY614417
KY614496
Laundonia flavovirescens
Arup and Grube (1999), Austria
AF353966
Laundonia flavovirescens
Arup et al. (2013a), Austria
Laundonia persimilis
Arup et al. (2013a), U.S.A.
KC179444
Laundonia persimilis
Vondrák et al. (unpubl.), JV7486
KT804978
Laundonia persimilis
Vondrák et al. (unpubl.), U.S.A.
KT804979
Leproplaca obliterans
Arup et al. (2013a), Sweden
KC179449
Leproplaca xantholyta
Arup et al. (2013a), Austria
KC179451
Leproplaca xantholyta
Gaya et al. (2012), Greece
JQ301670
Loekoesia austrocoreana
Kondratyuk et al.(2015c); KoLRI 120511, South
Korea
KT220200
KT220209
KT220218
Loekoesia austrocoreana
Kondratyuk et al.(2015c); KoLRI 120523, South
Korea
KT220201
KT220210
KT220219
Loekoesia austrocoreana
Kondratyuk et al. (2015c); SK-261, South Korea
KT220202
KT220211
KT220220
Mikhtomia gordejevii
Kondratyuk et al. (2014a); SK-80515, South
Korea
KJ021231
Mikhtomia gordejevii
Kondratyuk et al. (2017); South Korea
KY614420
KY614457
Mikhtomia gordejevii
Kondratyuk et al. (2017); South Korea
KY614421
KY614458
Mikhtomia gordejevii
Kondratyuk et al.(2014a); SK-80646, South
Korea
KJ021232
Mikhtomia multicolor
Kondratyuk et al. (2014a); SK-A14, South Korea
Mikhtomia multicolor
Kondratyuk et al. (2017); South Korea
KY614422
KY614459
Mikhtomia multicolor
Kondratyuk et al. (2017); South Korea
KY614423
KY614460
Mikhtomia multicolor
Kondratyuk et al. (2017); SK A19, South Korea
KY614424
Mikhtomia multicolor
Kondratyuk et al. (2017); South Korea
Mikhtomia
subflavorubencens
Kondratyuk et al. (2014a as M. oxnerii); SK90117, South Korea
KJ021233
KJ021311
Mikhtomia
subflavorubencens
Kondratyuk et al.(2014a as M. oxnerii); SK90755, South Korea
KJ021234
KJ021312
KT291479
KC179198
26
KC179532
KC179207
KC179208
KC179542
JQ301565
KJ021307
KJ021308
KJ021272
KY614461
Cryptogam Biodiversity and Assessment
Species name
References / voucher details
ITS
LSU
mtSSU
Olegblumia demissa
Kondratyuk et al. (2015c); SK-C65, Ukraine
KT220203
KT220212
KT220221
Opeltia arizonica
Arup et al. (2013a), U.S.A.
KC179433
KC179195
KC179529
Opeltia juniperina
Kondratyuk et al. (2017); SK-D10, China
KY614429
Opeltia juniperina
Vondrák and Halici (unpubl.), Turkey
JN813383
Opeltia neobaltistanica
Kondratyuk et al. (2017); SK-D09, China
KY614428
KY614503
Pyrenodesmia alociza
Kondratyuk et al. (2014a); SK-747, Ukraine
KJ021239
KJ021313
Pyrenodesmia chalybaea
Gaya et al. (2012), Gaya 38, Sweden
JQ301550
Pyrenodesmia teicholyta
Vondrák et al. (2012), Ukraine
JN641791
Pyrenodesmia teicholyta
Arup et al. (2013a), Denmark
Pyrenodesmia variabilis
Gaya et al. (2008), Spain
AY233224
Rufoplaca scotoplaca
Arup et al. (2013a), Sweden
KC179457
Seirophora californica
Arup et al. (2013a), U.S.A.
KC179643
Seirophora lacunosa
Kondratyuk et al. (2015c); SK-B07, Ukraine
Seirophora villosa
Seirophora villosa
KY614504
KC179176
KC179235
KC179573
KT220204
KT220213
KT220222
Kondratyuk et al. (2017); SK-D16, Morocco
KY614436
KY614469
KY614511
Martin and Winka (2000), Spain
AF098407
Upretia amarkantakana
SK E23, India, 10-013313/B (LWG), this paper
MG652763
Upretia amarkantakana
SK J20, India, 10-013313/B (LWG), this paper
MG652764
Upretia amarkantakana
SK J21, India, 10-013313 (LWG), this paper
MG652765
Upretia amarkantakana
SK J59, India, 10-013313 (LWG), this paper
MG652766
Usnochroma carphinea
Arup et al. (2013a), France
KC179468
Usnochroma carphinea
Gaya et al. (2008), Spain
EU639595
Usnochroma carphinea
Gaya et al. (2012), Spain
Usnochroma scoriophila
Gaya et al. (2012), Spain
JQ301664
JQ301560
Variospora kudratovii
Kondratyuk et al. (2014a); SK-487, Iran
KJ021244
KJ021276
KJ023192
Variospora kudratovii
Kondratyuk et al. (2014a); SK-485, Iran
KJ021243
KJ021275
KJ023191
Variospora kudratovii
Kondratyuk et al. (2014a); SK-484, Iran
KJ021242
KJ021274
KJ023190
Variospora latzelii
Vondrák et al. (unpubl.), Greece
JN813418
Variospora macrocarpa
Arup and Grube (1999), U355, Austria
AF353956
Variospora velana
Arup et al. (2013a), Italy
KC179476
KC179265
KC179605
Xanthaptychia aurantiaca
Arup et al. (2013a, as Seirophora aurantiaca),
Canada
KC179461
Xanthaptychia blumii
Kondratyuk et al. (2015d, as Seirophora blumii);
SK-A65, Iran
KT456219
KT456234
KT456249
Xanthaptychia
contortuplicata
Arup et al. (2013a,
contortuplicata), U.S.A.
Seirophora
KC179464
Xanthaptychia
contortuplicata
Gaya et al. (2015, as Seirophora contortuplicata),
Secon177, Tajikistan
KT291471
Xanthaptychia
contortuplicata
Kondratyuk et al. (2014a, as Seirophora
contortuplicata); SK- 775, China
Xanthaptychia orientalis
Fedorenko et al. (2009, as Seirophora orientalis);
FNM-153, Tajikistan
MG652767
KC179259
KC179598
JQ301548
as
27
KT291522
KJ021316
EU681287
Kondratyuk et al.
Species name
References / voucher details
ITS
Xanthaptychia orientalis
Kondratyuk et al. (2014a, as Seirophora
orientalis); SK-755, China
KJ021240
Yoshimuria cerussata
Kondratyuk et al. (2014a); SK-768, Antarctica
KJ021248
Yoshimuria galbina
Kondratyuk et al. (2014a); SK-704, South Korea
Yoshimuria spodoplaca
Kondratyuk et al. (2014a); SK-725, South Korea
(1977) described the new species Ioplaca sphalera Poelt,
to constitute a monotypic genus. Later I. sphalera was
corrected as synonym of I. pindarensis (Räs.) Poelt &
Hinteregger (Poelt and Hinteregger 1993). However, the
ascospore size for I. sphalera, presented by Poelt (1977),
Callopisma pindarense Räsänen (Räsänen 1951) do not
overlap; 18-22 x 8-11 µm for Ioplaca sphalera and 13 x 5 µm
for Callopisma pindarense (in our study 11-13 x 7-9 µm),
indicating that Ioplaca sphalera and I. pindarensis should
be treated as separate species. Molecular data on the sister
group Ioplaca is sparse and the common clade of the two
genera has weak support. The large difference in morphology
LSU
mtSSU
KJ023189
KJ023197
KJ021249
KJ023194
and anatomy was convincing enough to propose a new
genus for U. amarkantakana.
Ioplaca has also been compared with the genera
Acarospora, Heppia and Aspicilia characterized by the
apothecia referred as cryptolecanorine or aspicilioid (Poelt
1977). The umbilicate thallus with a central attachment
exhibited by Ioplaca has been keyed out together with the
South American genus Xanthopeltis R. Sant. (Poelt &
Hafellner 1980). However, Xanthopeltis differs in having a
monofoliose umbilicate thallus and one-septate and twisted
ascospores.
Pruinose
Lobe
Fig. 1. Habit and thallus morphology of Upretia amarkantakana (Y. Joshi & Upreti) S.Y. Kondra. & A. Thell Scale: 2 mm.
28
Cryptogam Biodiversity and Assessment
Fig. 2. Phylogenetic tree of the members of the subfamily Caloplacoideae after combined data set based on ITS1/ITS2 nr DNA,
28S nrLSU and 12S mtSSU sequences
29
Kondratyuk et al.
Fedorenko NM, Stenroos S, Thell A, Kärnefelt I, Elix JA, Hur JS
and Kondratuyk SY (2012). Molecular phylogeny of
xanthorioid lichens (Teloschistaceae, Ascomycota), with notes
on their morphology. Bibl. Lichenol. 108: 45–64.
Morphologically, the genus Upretia is similar to some
representatives of Caloplaca Th. Fr. (i.e. C. pelodella (Nyl.)
Hasse) and Elenkiniana S. Y. Kondr., Kärnefelt, Elix, A. Thell
& J.-S. Hur (i.e. E. ehrenbergii (Müll. Arg.) S. Y. Kondr.,
Kärnefelt, A. Thell, Elix, J. Kim, A. S. Kondratiuk & J.-S.
Hur). However these two taxa differs from Upretia primarily
in an apruinose lobate thallus, larger ascospores, wider
conidia and presence of depsidones.
Gardes M and Bruns TD (1993). ITS primers with enhanced
specificity for basidiomycetes – application to the identification
of mycorrhizae and rusts. Mol. Ecol. 2: 113–118. http://
dx.doi.org/10.1111/j.1365-294x.1993.tb00005.x
Gaya E, Navarro-Rosinés P, Llimona X, Hladun N and Lutzoni F
(2008). Phylogenetic reassessment of the Teloschistaceae
(lichen-forming Ascomycota, Lecanoromycetes). Mycol. Res.
112(5): 528–546. https://doi.org/10.1016/j.mycres.
2007.11.005
New combination
Upretia amarkantakana (Y. Joshi & Upreti) S.Y.
Kondr. & A. Thell comb. nov. MycoBank No. 823060.
Basionym: Caloplaca amarkantakana Y. Joshi & Upreti,
Lichenologist 38(6): 537 (2006). Type: INDIA, Madhya
Pradesh, Shahdol district, Amarkantak, on way to
Jwaleshwar temple, on exposed rocks, 29.09.1987, D. K.
Upreti 201785 (Holotype-LWG).
Gaya E, Högnabba F, Holguin Á, Molnár K, Fernández-Brime S,
Stenroos S, Arup U, Søchting U, van den Boom P, Lücking R,
Sipman HJM and Lutzoni F (2012). Implementing a cumulative
supermatrix approach for a comprehensive phylogentic study
of the Teloschistales (Pezizomycotina, Ascomycota). Mol.
Phyl. Evol. 63: 374–387. http://dx.doi.org/10.1016/
j.ympev.2012.01.012
ACKNOWLEDGEMENTS
The project was supported by the Ministry of
Education and Science of Ukraine (M/90-2015-285, M/342016-285 and M/172-2017-285) and Korean Brain Pool
Program (161S-4-3-1659) to SK; Almborn Foundation, Lund,
University (Sweden) to AT, a start-up grant from the
Department of Biology, Lund University (Sweden) to MH,
and Department of Science and Technology, New Delhi
(INT/UKR/P-19/2015) to DKU and SN. We are thankful to
Director, CSIR-NBRI, Lucknow, for infrastructure facilities
for the project. SK is thankful to Dr S.O. Oh for assistance
and support during visits to South Korea during 2014, 2015
and 2016.
Gaya E, Fernández-Brime S, Vargas R, Lachlan RF, Gueidan C,
Ramírez-Mejía M and Lutzoni F (2015). The adaptive radiation
of lichen-forming Teloschistaceae is associated with
sunscreening pigments and a bark-to-rock substrate shift. –
Proc. Nat. Acad. Sci. USA 112 (37): 11600–11605. http://
dx.doi.org/10.1073/pnas.1507072112.
Joshi Y and Upreti DK (2006). Caloplaca amarkantakana, a new
species in the Caloplaca sideritis group from India.
Lichenologist 38(6): 537-540.
Kärnefelt I (1989). Morphology and Phylogeny in the
Teloschistaceae. Crypt. Bot. 1(2): 97–140.
Kondratyuk S, Jeong MH, Yu NH, Kärnefelt I, Thell A, Elix, JA,
Kim J, Kondratyuk AS and Hur JS (2013). Four new genera of
teloschistoid lichens (Teloschistaceae, Ascomycota) based on
molecular phylogeny. Acta Bot. Hung. 55: 251–274. http://
dx.doi.org/10.1556/abot.55.2013.3-4.8
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