Persoonia 23, 2009: 86 – 98
www.persoonia.org
RESEARCH ARTICLE
doi:10.3767/003158509X475913
Taxonomy and evolutionary relationships within species of
section Rimosae (Inocybe) based on ITS, LSU and mtSSU
sequence data
E. Larsson1, M. Ryberg1, P.-A. Moreau2, Å. Delcuse Mathiesen1, S. Jacobsson1
Key words
Agaricales
Basidiomycota
molecular systematics
phylogeny
taxonomy
Abstract The present study aimed at elucidating the structure of Inocybe subg. Inosperma sect. Rimosae but
included also representatives from subg. Mallocybe and the genus Auritella. Phylogenetic relationships were inferred using ITS, LSU and mtSSU sequence data. The analyses recovered the ingroup as a monophyletic, strongly
supported clade. The results indicate that recognizing Auritella on the genus level renders Inocybe paraphyletic.
The species traditionally placed in sect. Rimosae were found to be distributed over two strongly supported clades,
Maculata and Rimosae s.s. The Maculata clade clusters with sect. Cervicolores and the two represent subg. Inosperma in a strict sense. Rimosae s.s. emerges as an independent, supported clade well separated from Inosperma
s.s. Twenty-one terminal groups were correlated with morphologically distinct species. In addition several taxa on
single branches and minor less supported clades were recovered. A key to the identified species of the Maculata
and Rimosae s.s. clades which occur in Northwest Europe is provided.
Article info Received: 7 April 2009; Accepted: 9 July 2009; Published: 21 September 2009.
INTRODUCTION
Inocybe is a large genus of agaric fungi with an estimated 500
species world wide (Kirk et al. 2008), a number that is likely to
increase considerably when tropical and southern temperate
areas are more intensively explored. Intrageneric classifications
have been based mainly on spore morphology, the form and
distribution of cystidia, and stipe morphology. The spores may
be ellipsoid, amygdaliform or nodulose/angular. Many species
have incrusted thick-walled pleuro- and cheilocystidia (metuloids). Some large groups completely lack the metuloids but
then have numerous thin-walled cheilocystidia. The stipe may
be of uniform thickness or have a distinctly bulbous base. A
number of classifications combining these and other characters
in various ways have been proposed (Heim 1931, Kühner &
Romagnesi 1953, Kühner 1980, Kuyper 1986, Singer 1986,
Stangl 1989, Kobayashi 2002).
Several phylogenetic analyses of Inocybe using both ribosomal
and protein coding genes have been published (Matheny et al.
2002, Matheny 2005, Matheny & Bougher 2006a, Matheny et
al. 2009). These studies confirm that Inocybe is monophyletic.
In a multi-gene phylogeny of Agaricomycotina Matheny et al.
(2006) showed that Inocybe does not belong in Cortinariaceae,
where it has traditionally been placed, but has affinities to Crepidotaceae. Matheny (2005) suggested that Inocybe should be
recognized at the family level as Inocybeaceae, a family already
proposed and described by Jülich (1982).
Matheny (2005) identified five clades within Inocybaceae, which
he called Inocybe, Inosperma, Pseudosperma, Mallocybe and
Auritella. The Inocybe clade holds the generic type species and
1
2
Department of Plant and Environmental Sciences, University of Gothenburg,
P.O. Box 461, SE-405 30 Göteborg, Sweden;
corresponding author e-mail: ellen.larsson@dpes.gu.se.
Laboratorie de Botanique, Faculté de Sciences Pharmaceutiques et
Biologiques, 3 rue du Professeur Laguesse, BP 83, F-59006 Lille Cédex,
France.
includes all species with incrusted cystidia (metuloids) irrespective of spore shape. Mallocybe, recognized as a separate subgenus (Kuyper 1986), includes species with necropigmented
basidia and thin-walled cheilocystidia originating from the subhymenium. Auritella was recently separated from Inocybe as an
independent genus (Matheny & Bougher 2006a, b) and seems
to represent a unique Paleotropical and Southern hemisphere
lineage with species from Australia and Africa. The two clades
Inosperma and Pseudosperma basically include the species
in sections Rimosae and Cervicolores in the classification by
Kuyper (1986). Pseudosperma was introduced as a clade
name only and not formally assigned any classification status
according to ICBN (McNeill et al. 2006).
Section Rimosae is in traditional classifications placed in subg.
Inosperma (Kühner 1980, Kuyper 1986, Stangl 1989). The
section includes species characterized by radially fibrillose to
rimose (squamulose) caps, ellipsoid to phaseoliform spores, and
absence of metuloid pleurocystidia but with densely packed,
simple, cylindrical, clavate to pyriform hymenial cheilocystidia
that make the gill edge look distinctly white in mature specimens. Other characters that may occur are a distinctly bulbous
stem base, reddening flesh, yellow to olivaceous tinges on
lamellae, and specific odours. Phylogenetic analyses in a recent
publication on the biogeography of Inocybaceae (Matheny et al.
2009) included a broader sampling of sect. Rimosae than any
previous study, although representatives from Europe were
still few. The results indicated that the section is non-monophyletic.
Many species in Rimosae are known to occur on more nutrient rich soils, often on calcareous ground, others prefer more
nutrient poor acid soils. Several species are found in disturbed
places such as along forest paths and roadsides. They form
ectomycorrhizal associations with a broad range of host trees
of both gymnosperms and angiosperms (Kuyper 1986, Stangl
1989, Jacobsson 2008). Several species occur in arctic and
alpine regions and are then associated with shrubs and herbs
such as Salix, Dryas, and Polygonum (Favre 1955, Horak
© 2009 Nationaal Herbarium Nederland & Centraalbureau voor Schimmelcultures
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87
E. Larsson et al.: Relationships among species of section Rimosae
1987, Kühner 1988, Bon 1997, Ferrari 2006). A few are found
on coastal sand dunes associated with Pinus and Salix (Orton
1960, Bon 1984).
The taxonomy in Rimosae has for a long time been confused
since many species are described on small differences in
macro- and micro-morphology. Authors with a conservative
approach recognise 10 – 20 species (Kuyper 1986, Stangl
1989), others include more than 40 (Bon 1997). In the Nordic
countries 8–13 species are usually recognized (Stridvall et al.
1989, Jacobsson 2008). Some European species are likely to
show a northern circumpolar distribution (Ryberg et al. 2008).
However, since a modern comprehensive treatment of Inocybe
in North America is lacking the biogeographic knowledge is
incomplete (Kauffman 1924, Stuntz 1947, 1954).
Inocybe rimosa, taken in a wide sense, shows a considerable
morphological variation and also a broad ecological range
covering all biomes from nemoral deciduous forests to the
arctic-alpine zone. Some authors have advocated a narrow species concept and described a number of species and varieties
(Heim 1931, Kühner 1988, Bon 1997). Kuyper (1986) choose
the opposite strategy and recognized only one species, listing
more than 30 species and varieties as synonyms.
The present study had three aims: to examine the phylogenetic
structure and position of sect. Rimosae, to identify the number
of North European species within Rimosae, and to elucidate
the phylogenetic relationship among them.
MATERIALS AND METHODS
Morphological studies
Micro-morphological characters were observed using a Zeiss
Axioscope 2, equipped with phase contrast. Spores and cystidia
were measured in a 3 % KOH solution at × 400 and 1 000
magnification using microscope photos taken with a Canon
G9 digital camera and using software AxioVision (Carl Zeiss
AB). Unusually large or small spores were not considered. Collections are deposited in the herbarium of the Department of
Plant and Environmental Sciences, University of Gothenburg
(GB) if not otherwise indicated. Data on sequenced specimens
is provided in Table 1.
Taxon sampling
Ninety-nine ingroup specimens were sequenced. They represent the majority of species within section Rimosae that occur
in North Europe (Jacobsson 2008). In addition specimens from
Estonia, France, Great Britain, Slovakia, USA, and Australia
were included. Specimens were selected to represent a broad
spectrum of morphological characters and ecology. Eight
species of sect. Cervicolores and subg. Mallocybe were also
sequenced and included in the analyses. Based on results
from earlier molecular phylogenetic studies of Agaricales and
Inocybe (Matheny 2005, Matheny & Bougher 2006a, Matheny et al. 2006) species of Conocybe, Crepidotus, Naucoria,
Pleuroflammula, and Simocybe, were selected as out-group.
ITS and LSU sequences for included species of Auritella,
Simocybe, and Pleuroflammula, were taken from GenBank
(AY380371, AY380395, AY635766, DQ494696, AY745706,
AF205707, DQ494685, AF745706). Two GenBank sequences
(DQ917657 ITS, EU600863 LSU) representing specimens
identified as Inocybe sororia were included in the separately
aligned and analysed dataset for the Rimosae s.s. subclade
A (see below).
DNA extraction, PCR and sequencing
Sequences from three regions were generated for the study,
the complete ITS region, 1200 base pairs of the 5’ end of the
nuclear LSU ribosomal DNA, and the mitochondrial SSU ribosomal DNA. DNA extractions, PCR reactions and sequencing
were performed as described in Larsson & Örstadius 2008.
Primers used to amplify the complete ITS region and the 5’ end
of the LSU region were ITS1F (Gardes & Bruns 1993) and
LR21, LR0R and LR7 (Hopple & Vilgalys 1999), the mtSSU
MS1 and MS2 (White et al. 1990). Primers used for sequencing
were ITS1, ITS3, ITS4, MS1, MS2 (White et al. 1990), Ctb6
(http://plantbio.berkeley.edu/~bruns/), Lr5 and LR3R (Hopple
& Vilgalys 1999).
Phylogenetic analyses
Sequences were edited and assembled using Sequencher 3.1
(Gene Codes, Ann Arbor). Sequences were aligned automatically using the software MAFFT (Katoh et al. 2002) and adjusted
manually using the data editor in PAUP* (Swofford 2003).
Sequences have been deposited in GenBank and accession
numbers are listed in Table 1.
Heuristic searches for most parsimonious trees were performed
using PAUP*. All transformations were considered unordered
and equally weighted. Variable regions with ambiguous alignment were excluded and gaps were treated as missing data.
Heuristic searches with 1 000 random-addition sequence replicates and TBR branch swapping were performed. Relative
robustness of clades was assessed by the bootstrap method
using 1 000 heuristic search replicates with 100 random taxon
addition sequence replicate, TBR swapping, saving 100 trees
in each replicate.
Bayesian analysis of the datasets was performed using MrBayes 3.2 (Huelsenbeck & Ronquist 2001, Ronquist & Huelsenbeck 2003). MrModelTest 2.2 (Nylander 2004) was used to
estimate separate best-fit models of evolution for ITS (1 and
2 combined), 5.8S, LSU, and mtSSU. The Bayesian inference
was set up with model parameters estimated separately for
each of the four partitions. Four parallel runs using MetropolisCoupled Markov Chain Monte Carlo (MCMCMC) were implemented instead of the default of two to improve the inference of
convergence statistics. To decrease the computational burden
two chains, one hot and one cold (temperature difference set
to 0.1 to increase the efficiency of metropolis coupling), were
used instead of the default of four. Each chain was run for 10
million generations with tree and parameter sampling every
1 000 generations (10 000 trees). Tracer (Drummond & Rambaut 2007) and AWTY (Wilgenbusch et al. 2004) were used to
examine when the chains had reached a stationary state and
how many generations were appropriate to discard as burn-in.
A 50 % majority-rule consensus phylogram was computed from
the remaining trees; the proportions of this tree correspond to
Bayesian posterior probabilities (BPP). To investigate if there
were any conflict between the nuclear and mitochondrial regions, analyses were also made for these partitions separately.
It was then checked if there were any conflict between the
regions in nodes separating species and with more than 0.7
BPP support (cf. Lutzoni et al. 2004).
To improve the resolution and be able to use the complete ITS
region in the phylogenetic analysis realignment of sequence
data in the Rimosae s.s. subclade A and Rimosae s.s. subclade
D were performed as described above. Heuristic searches for
most parsimonious trees and bootstrap analysis were performed as above except that no restriction on saving of trees
in the replicates was applied.
RESULTS
For all 99 ingroup specimens the ITS/LSU region was generated. For 54 of these also mtSSU sequences were generated
88
Persoonia – Volume 23, 2009
Table 1 Data of specimens sequenced in this study.
Species
Original specimen identification
Coll. ID. / Origin
Ecology, substrate
GenBank
ITS / LSU
Conocybe siliginea
Crepidotus mollis
C. mollis var. calolepis
Inocybe cervicolor
I. bongardii
I. subhirsuta
I. cfr calamistrata
I. dulcamara
I. terrigena
I. fulvipes
I. agardhii
Naucoria salicis
N. bohemica
N. submelinoides
Inocybe adaequata
I. arenicola
I. bulbosissima
I. cfr cookei
I. cfr flavella
I. cfr rimosa
I. cfr squamata
I. cookei
I. dulcamaroides
I. erubescens
I. flavella
I. xanthocephala
I. hygrophorus
I. maculata
I. maculata forma fulva
I. cfr rimosa
I. adaequata
I. arenicola
I. arenicola
I. fastigiata var. alpina
I. fastigiata var. alpina
I. fastigiata var. alpina
I. bulbosissima
I. rimosa
I. fastigiata var. alpina
I. cookei
I. rimosa
I. majalis
I. flavella
I. flavella
I. flavella
I. rimosa
I. perlata
I. cfr rimosa
I. fastigiata
I. arenicola
I. rimosa
I. rimosa
I. rimosa
I. umbrinella
I. rimosa var. umbrinella
I. cft obsoleta
I. cft squamata
I. cft squamata
I. squamata
I. squamata
I. squamata
I. squamata
I. squamata
I. cookei
I. cookei
I. cookei
I. cookei
I. cookei
I. dulcamaroides
I. dulcamaroides
I. erubescens
I. erubescens
I. erubescens
I. flavella
I. flavella
I. flavella
I. xanthocephala
I. hygrophorus
I. maculata
I. maculata
I. maculata
I. maculata
I. maculata
I. maculata
I. maculata
I. maculata
I. cfr maculata
I. cfr rimosa
I. maculata forma fulva
I. maculata forma fulva
I. maculata
LÖ93-04 / Swe
EL45-04 / Swe
EL14-08 / Swe
SJ04024 / Swe
EL123-04 / Swe
EL45-05 / Nor
KHL13071 / Costa Rica
EL89-06 / Swe
EL117-04 / Swe
EL37-05 / Nor
EL88-04 / Swe
EL71a-03 / Swe
EL71b-03 / Swe
TAA185174 / Est
In a pasture
deciduous wood
deciduous wood
Picea forest, calcareous
Quercus, calcareous
Dryas, Salix, alpine
Quercus
Salix glauca
Picea, calcareous
Dryas, Salix, alpine
Salix, calcareous
Alnus, Betula
Alnus, Betula
Alnus
DQ389731
AM882996
FJ904178
AM882939,
AM882941
AM88294
AM882948
FJ904122
AM882864
AM882858
FJ904123
FJ904180
FJ904179
AM882885
PC2008-0014 / GB
MR00022 / Swe
RC GB99-014 / Fra
EL238-06 / Fra
EL51-05 / Nor
EL66-05 / Nor
EL37-06 / Swe
EL75-07 / Swe
EL88-06 / Swe
EL30-06 / Swe
EL104-04 / Swe
GK080924 / GB
PAM05062502 / Fra
EL118-05 / Fin
BJ920829 / Swe
EL90-04 / Swe
EL71-04 / Swe
JD2008-0241 / GB
I116-06 / Australia
PAM05061101 / Fra
JV26578 / Est
EL127-04 / Swe
TAA185135 / Est
JV22619 / Est
PC080925 / GB
JV8125 / Fin
EL81-06 / Swe
I93-04 / Australia
I113-05 / Australia
SJ92-010 / Swe
SM92-013 / Swe
SJ92-017 / Swe
Stordal18318 / Nor
JV2609 / Fin
MR00035 / Swe
EL191-06 / GB
EL70a-03 / Swe
EL73-05 / Swe
EL109-04 / Swe
EL29-08 / USA
EL112-06 / Swe
TAA185164 / Est
KGN980714 / Swe
BH910707 / Swe
EL56-08 / Swe
EL137-05 / Swe
LAS89-030 / Swe
PAM00100606 / Fra
EL97-06 / Swe
EL74-05 / Swe
MR00020 / Swe
EL121-04 / Swe
EL58-03 / Swe
EL126-04 / Swe
EL182-08 / Slov
EL78-03 / Swe
EL166-08 / Swe
EL114-06 / Swe
SJ05029 / Swe
EL247-06 / Fra
PAM01100120 / Fra
SJ06007 / Swe
Fagus forest
Tilia, Corylus
Pinus, Salix, sand dune
Pinus, sand dune
Dryas, Salix, alpine
Salix reticulata, alpine
Salix polaris, alpine
Salix reticulata, alpine
Salix lapponum, subalpine
Salix polaris, alpine
Corylus
Quercus, Betula, wet
Salix, calcareous soil
Salix, Betula, ravine
Salix, Betula, hyperit
Salix, Betula, calcareous
Fagus, calcareous soil
Fagus, Corylus
deciduous forest
Tilia, calcareous
Pinus, calcareous
Fagus, Quercus, calcareous
Pinus, Betula, calcareous
Quercus, Corylus, calcareous
Pinus, Quercus
Picea, Tilia, Populus, rich
Salix glauca, subalpine, wet
deciduous forest
deciduous forest
Picea, calcareous
Picea, Populus, Betula
Pinus, Populus, park
Picea mixed forest
Picea, Populus, Pinus
Corylus, Quercus
Corylus, Quercus
Fagus, Quercus
Betula, Quercus
Corylus, Quercus
Salix reticulata, alpine
Dryas, alpine
Quercus, Tilia, calcareous
Fagus, Tilia, rich soil
Fagus, park
Corylus, Salix, Alnus, wet
Corylus, Alnus, Quercus wet
Alnus, wet
Salix
Betula, Salix, subalpine meadow
Fagus, Quercus
Tilia, Corylus, calcareous
Fagus, Quercus, calcareous
Fagus, rich soil
Fagus, Quercus, calcareous
Fagus, rich soil
Mixed trees, pasture
Picea, Corylus, calcareous
Dryas, Polygonum, alpine
Pinus, Alnus
Pinus, Populus
Betula
Betula
FJ904177
AM882706
FJ904134
FJ904133
AM882764
AM882765
FJ904161
FJ904160
FJ904159
FJ904158
AM882952
FJ904129
FJ904128
AM882782
AM882774
AM882773
AM882786
FJ904125
FJ904142
FJ904155
FJ904154
AM882768
AM882766
FJ904157
FJ904153
FJ904152
FJ904135
FJ904141
FJ904140
AM882785
AM882783
AM882784
FJ904139
FJ904138
AM882954
FJ904173
AM882953
AM882955
AM882956
FJ904127
FJ904126
AM882950
AM882951
AM882949
FJ904131
AM882776
AM882775
FJ904130
FJ904137
AM882959
AM882958
AM882957
AM882963
AM882964
FJ904172
AM882962
FJ904171
FJ904170
AM882994
FJ904169
FJ904168
FJ904167
mtSSU
FJ904242
FJ904185
FJ904186
FJ904187
FJ904181
FJ904183
FJ904184
FJ904182
FJ904243
FJ904240
FJ904241
FJ904189
FJ904188
FJ904224
FJ904223
FJ904222
FJ904221
FJ904220
FJ904196
FJ904195
FJ904193
FJ904192
FJ904216
FJ904215
FJ904219
FJ904218
FJ904214
FJ904190
FJ904203
FJ904234
FJ904233
FJ904194
FJ904239
FJ904198
FJ904199
FJ904197
FJ904202
FJ904232
FJ904231
FJ904230
89
E. Larsson et al.: Relationships among species of section Rimosae
Table 1 (cont.)
Species
I. melliolens
I. cfr microfastigiata
I. mimica
I. obsoleta
I. perlata
I. quietiodor
I. rhodiola
I. rimosa
I. sororia
I. squamata
I. umbrinella
Original specimen identification
I. umbrinella
I. melliolens
I. microfastigiata
I. mimica
I. mimica
I. obsoleta
I. obsoleta
I. perlata
I. perlata
I. quietiodor
I. quietiodor
I. quietiodor
I. quietiodor
I. quietiodor
I. quietiodor
I. rhodiola
I. rhodiola
I. rimosa
I. rimosa
I. rimosa
I. rimosa var. umbrinella
I. rimosa
I. fastigiata var. argentata
I. rimosa
I. rimosa
I. fastigiata var. argentata
I. cfr fasigiata
I. rimosa coll.
I. squamata
I. cfr squamata
I. cfr squamata
I. curreyi
I. rimosa var. brunnea
I. rimosa coll.
I. cfr rimosa
I. cfr rimosa
I. perlata
Coll. ID. / Origin
Ecology, substrate
PAM05052303 / Fra
EL224-06 / Fra
EL113-06 / Swe
EBJ961997 / Swe
TK2004-114 / Swe
EL17-04 / Swe
BJ890915 / Swe
BJ940922 / Swe
EL74-04 / Swe
RP980718 / Swe
LAS97-067 / Swe
LAS94-023 / Swe
PAM01091310 / Fra
EL115-04 / Swe
JV20202 / Nor
PAM00090117 / Fra
EL223-06 / Fra
AO2008-0250 / GB
EL118-08 / Swe
EL102-04 / Swe
EL211-06 / Fra
TK97-156 / Swe
PAM03110904 / Fra
EL75-05 / Swe
SJ04007 / Swe
PAM06112703 / Corsica
Kuoljok0512 / Swe
JV15200 / Swe
SJ08003 / Swe
TK96-109 / Swe
SJ85048 / Nor
PAM05052301 / Fra
JV13699 / Fin
JV17954 / Est
PC081010 / GB
PC080816 / GB
PAM01102912 / Fra
(Table 1). The aligned complete dataset, including sequences
downloaded from GenBank, consisted of 119 sequences and
3 461 characters. The majority of the ITS1 and ITS2 regions
was found to be too variable to be included in the analyses. After
exclusion of ambiguous regions 1 985 characters remained
for the analysis. Of these 1 409 were constant, 174 were variable and parsimony uninformative, and 402 were parsimony
informative.
The maximum parsimony analysis yielded 63 900 equally most
parsimonious trees (length = 1 812, CI = 0.4354, RI = 0.8490).
Bootstrap analysis recovered Inocybe s.l. (including Auritella)
as monophyletic with 91 % support. It forms together with
Crepidotus, Simocybe, and Pleuroflammula a clade with 92 %
bootstrap support.
Four major clades within the ingroup received strong support.
They are here called Auritella (100 %), Rimosae s.s. (98 %),
Mallocybe (100 %), and Inosperma (98 %). The Inosperma
clade was further divided in the Cervicolores clade (98 %)
and a moderately supported group here called the Maculata
clade (72 %).
The Rimosae s.s. clade includes 68 sequences dispersed over
6 strongly supported subclades (Fig. 1A – F) and a number
of groups that in most cases seem to correspond to species.
Eight of these terminal groups have been identified as Inocybe
arenicola, I. mimica, I. dulcamaroides, I. flavella, I. squamata,
I. hygrophorus, I. obsoleta, and I. perlata, respectively. One
distinct but non-identified clade is reported as Inocybe sp.
Specimens identified as I. flavella seem to cover several taxa
differing in the shape and size of spores. Small-spored specimens are together lumped as I. cfr flavella but this label seems
Tilia, calcareous
Salix, Quercus, wet
Dryas, alpine
Pinus, Picea, calcareous
Pinus, Betula, calcareous
Picea, Corylus
Picea mixed forest
Fagus, Betula, meadow
Corylus, Betula, calcareous
Fagus, Quercus, park
Fagus, Quercus, calcareous
Fagus, Quercus, calcareous
Betula, Salix
Quercus, Tilia, park
Betula, Alnus, calcareous
Salix
Salix, wet forest
Salix
Picea, Betula, calcareous
Betula, garden
Quercus, Carpinus
Corylus, calcareous
Quercus
Fagus, Quercus, park
Tilia
Fagus
Salix, alpine meadow
Salix herbacea, alpine
Betula, Pinus
Populus, calcareous
Populus, calcareous
Populus, Picea, park
Pinus, Populus, Salix
Pinus, calcareous
Helianthemum, calcareous
Fagus, Quercus, calcareous
Quercus ilex
GenBank
ITS / LSU
mtSSU
FJ904148
FJ904149
FJ904156
FJ904124
AM882781
AM882769
AM882770
AM882772
AM882771
FJ936169
AM882974
AM882961
FJ936168
AM882960
FJ904174
FJ904176
FJ904175
FJ904147
FJ904146
AM882761
FJ904145
AM882844
FJ904144
AM882762
AM882763
FJ904143
FJ904150
FJ904151
FJ904136
AM882780
AM882778
FJ904132
FJ904165
FJ904166
FJ904164
FJ904163
FJ904162
FJ904211
FJ904217
FJ904191
FJ904204
FJ904205
FJ904238
FJ904237
FJ904236
FJ904235
FJ904210
FJ904209
FJ904208
FJ904207
FJ904206
FJ904212
FJ904213
FJ904201
FJ904200
FJ904228
FJ904229
FJ904227
FJ904226
FJ904225
to cover at least two taxa. Thirty-three sequences cluster to a
strongly supported clade that corresponds to I. rimosa s.l. Within
such a broadly defined I. rimosa five subclades corresponding
to species were recovered. One is the alpine species I. bulbosissima, a second is I. rimosa s.s., a third is I. umbrinella, and
the remaining two are tentatively identified as I. cfr sororia and
I. melliolens. The specimens originating from deciduous forests
in Australia form a strongly supported clade within Rimosae
and represent two unidentified species. In addition several
taxa on single branches and minor less supported clades were
recovered (Fig. 1). These terminals may represent new species, either undescribed or described from other regions but
not yet identified.
In the Maculata clade six terminal taxa were recovered as
strongly supported (Fig. 1). They are identified as Inocybe
adaequata, I. rhodiola, I. erubescens, I. quietiodor, I. cookei,
and I. maculata, including I. maculata forma fulva.
For the separate regions, MrModelTest suggested GTR+I+G
(ITS), K80+I (5.8S), GTR+I+G (LSU), and GTR+I+G (mtSSU)
as optimal models; this information was employed in MrBayes.
The Tracer and AWTY analysis indicated that 5 million generations would be an appropriate burn in time as a stationary state
was reached for all chains well before that. This was also supported by the fact that the standard deviation of split frequencies
calculated in MrBayes was below 0.01 well before this point.
The last 5 000 trees of each run (20 000 trees in total) were
therefore summarized into a 50 % majority-rule consensus
phylogram (Fig. 1).
No conflict was found between the nuclear and mitochondrial regions according to the criteria defined in Materials and
Methods.
90
Persoonia – Volume 23, 2009
I. rimosa PAM03110904
I. rimosa EL 102/04
I. rimosa EL 211/06
I. rimosa SJ04/007
I. rimosa
I. rimosa EL 75/05
I. rimosa PAM06112703
1/−
I. rimosa AO2008/0250
I. rimosa EL 118/08
0.98 / 72
I. rimosa TK97/156
1
1 / 93
I. melliolens PAM05052302
I. melliolens
99
I. melliolens EL224/06
1
0.98 / −
I. cfr sororia Kuoljok0512
I. cfr sororia
100
I. cfr sororia JV15200
1
I. cfr rimosa JV8125
81
I. cfr rimosa PC080925
I. bulbosissima EL30/06
I. bulbosissima EL88/06
I. bulbosissima EL37/06
I. bulbosissima
1
0.97 / −
I. bulbosissima EL66/05
86
I. bulbosissima EL75/07
I. bulbosissima EL51/05
I. cfr rimosa JV26578
I. cfr rimosa PAM05061101
1/−
I. cfr rimosa TAA185135
1 / 100
I. cfr rimosa JV22619
I. cfr microfastigiata EL113/06
0.97 / −
I. cfr rimosa EL127/04
I. umbrinella PC081010
1/−
I. umbrinella JV17954
1 / 97
0.97 / −
I. umbrinella PAM01102912
I. umbrinella
I. umbrinella JV13699
I. umbrinella PC080816
1 / 96
I. obsoleta BJ890915
I. obsoleta
1 / 88
I. obsoleta EL17/04
1 / 100
I. perlata EL74/04
I. perlata
I. perlata BJ940922
I. cfr rimosa GGI113/05
1 / 99
I. cfr rimosa GGI116/06
I. cfr rimosa GGI93/04
I. cfr flavella EL118/05
1 / 88
I. cfr flavella PAM05062502
I. cfr flavella
I. cfr flavella JK240908
I. cfr flavella EL90/04
1
89
I. cfr flavella BJ920829
I. squamata PAM05052301
1 / 98
I. squamata SJ85/048
1/− 1
I. squamata
78
I. squamata SJ08/003
0.99 / −
I. squamata TK96/109
0.99 / 84
I. flavella LAS89/030
1 / 72
I. flavella EL137/05
I. flavella
1
I. flavella EL56/08
91
I. xanthocephala PAM00100606
1 / 75
I. hygrophorus EL97/06
I. hygrophorus
I. sp. SJ92/010
I. sp. JV2607
1 / 100
0.95
I. sp. Stordal18318
I. sp.
I. sp. SJ92/017
I. sp. SM92/013
I. dulcamaroides EL112/06
1 / 100
I. dulcamaroides
I. dulcamaroides EL29/08
1
−
1 / 100
I. mimica TK2004/114
I. mimica
0.99
I. mimica EBJ961997
88
1 / 85
I. cfr rimosa EL81/06
I. arenicola EL238/06
1
1
I. arenicola
100
I. arenicola RC GB99/014
79
1
I. cfr rimosa JD2008/0241
−
I. cfr rimosa EL71/04
Auritella geoaustralis AY380395
Auritella aureoplumosa AY635766
AURITELLA
Auritella dolichocystis AY380371
B
C
RIMOSAE sensu stricto
A
D
E
F
1 / 100
Fig. 1 Bayesian 50 % majority-rule consensus phylogram. Bayesian posterior probabilities and bootstrap values above 70 % from the maximum parsimony
analysis are indicated on branches. Recovered major clades are named and marked with a scale bar and minor supported clades discussed in the text have
been numbered A–F. Conocybe siliginea was used to root the tree.
91
E. Larsson et al.: Relationships among species of section Rimosae
MACULATA
I. maculata f. fulva PAM 01100120
I. maculata f. fulva EL 78/03
I. maculata f. fulva EL166/08
1 / 97
I. maculata f. fulva
I. maculata f. fulva EL247/06
I. maculata f. fulva SJ05/029
1 / 100
I. maculata f. fulva SJ06/007
I. maculata f. fulva EL 114/06
I. maculata EL121/04
I. maculata MR00020
1 / 83
1 / 91
0.98 / −
I. maculata EL74/05
I. maculata
I. maculata EL58/03
1 / 100
I. maculata EL126/04
I. maculata EL182/08
I. cookei EL191/06
I. cookei MR00035
0.96 / 73
I. cookei
I. cookei EL70A/03
1 / 100
I. cookei EL73/05
1/−
I. cookei EL109/04
I. cfr cookei EL104/04
1 / 72
I. quietiodor LAS97/067
I. quietiodor RPI19980718
I. quietiodor PAM01091310
I. quietiodor
1 / 100
I. quietiodor JV20202
I. quietiodor LAS94/023
I. quietiodor EL115/04
1 / 100
I. rhodiola EL223/06
1 / 92
1 / 98
I. rhodiola PAM00090117 I. rhodiola
I. adaequata MR00022
1 / 100
I. adaequata
1 / 94
I. adaequata 2008/0014
I. erubescens BH910707
1 / 100
I. erubescens TAA185164
I. erubescens
I. erubescens KGN980714
I. subhirsuta EL43/05
1 / 88
0.98 / −
I. cfr calamistrata KHL13071
CERVICOLORES
1 / 98
I. cervicolor SJ04/024
I. bongardii EL123/04
I. fulvipes EL37/05
1 / 95
0.98 / −
I. agardhii EL88/04
MALLOCYBE
1 / 100
I. terrigena EL117/04
I. dulcamara EL89/06
1 / 100
Crepidotus mollis EL45/04
Crepidotus calolepis EL14/04
1 / 80
1 / 81
Simocybe serrulata DQ494696/AY745706
Simocybe centunculus AF205707
0.99 / −
Pleuroflammula flammea DQ494685/AF367962
1 / 99
Naucoria bohemica EL71B/03
Naucoria salicis EL71A/03
Naucoria submelinoides TAA185174
Conocybe siliginea LÖ9304
INOSPERMA
Fig. 1 (cont.)
0.1
Also in this analysis Inocybe, including Auritella, is recovered as
monophyletic with a BPP value of 1.00. The four major clades
recovered in the maximum parsimony analysis, are present
also in the Bayesian tree, all of them with BPP values 1.00. The
Cervicolores (BPP 1.00) and Maculata clades (BPP 1.00) are
also strongly supported. All 21 species clades from the maximum parsimony analysis of sect. Rimosae are also supported
in the Bayesian analysis (Fig. 1). The Bayesian tree topology
is more or less identical to the MP bootstrap tree. However,
some additional clades were recovered with strong support,
e.g. Crepidotaceae (BPP 0.99).
The realigned dataset of 33 taxa in the Rimosae s.s. subclade
A included 2 819 characters. After exclusion of regions with
incomplete data, mainly from the mtSSU, 2 362 characters
remained for the analysis. Of these 2 126 were constant, 83
were variable and parsimony uninformative, and 153 were
parsimony informative. The heuristic searches recovered 4 290
equally most parsimonious trees (length = 340, CI = 0.7853,
RI = 0.8933). Fig. 2 illustrates one of these as a mid-point rooted
phylogram. The bootstrap analysis recovered the same strongly
supported terminal clades as in the complete parsimony analy-
sis but also generated moderate support (78 %) for I. rimosa
s.s. Support for the remaining species level clades were: I.
melliolens (99 %), I. cfr sororia (98 %), I. bulbosissima (98 %),
and I. umbrinella (100 %). The North American sequences representing I. sororia clustered with North European sequences
with 100 % support.
The realigned dataset of 18 taxa in the Rimosae s.s. subclade
D included 2 812 characters. After exclusion of regions with
incomplete data, mainly from the mtSSU, 2 421 characters
remained for the analysis. Of these 2 266 were constant, 57
were variable and parsimony uninformative, and 98 were parsimony informative. The heuristic search recovered 675 most
parsimonious trees (length = 190, CI = 0.8526, RI = 0.9111).
Fig. 3 illustrates one of these as a mid-point rooted phylogram.
The bootstrap analysis recovered five strongly supported
(above 90 %) clades of which four have the same topology as
in the complete analyses, viz. I. squamata (100 %), Inocybe
sp. (100 %), I. flavella (100 %), and I. cfr flavella A (99 %) while
I. cfr flavella B is supported only together with I. hygrophorus
(100 %). Inocybe flavella + I. xanthocephala (91 % in the large
parsimony analysis) is not supported.
92
Persoonia – Volume 23, 2009
found that the terminal clades we have been able to correlate
to morphological species, in general show a low within clade
sequence divergence. Notable exceptions to this observation
are I. rimosa and related species (Fig. 2 subclade A), and I. flavella and related species (Fig. 3 subclade D).
DISCUSSION
The present study aimed at elucidating the phylogenetic structure of Inocybe subg. Inosperma sect. Rimosae as defined
by Kuyper (1986) but included also representatives from the
subg. Mallocybe and the recently erected genus Auritella
(Matheny & Bougher 2006a, b). The ingroup was recovered
as monophyletic and strongly supported. However, our results
indicate that recognizing Auritella on the genus level renders
Inocybe paraphyletic. The solution is either to sink Auritella as
a subgenus within Inocybe, or to split Inocybe into a number of
smaller genera. However, our study was not designed to take
a decision on that matter.
The Maculata clade is here represented by seven species
with thin-walled, often clavate to pyriform cheilocystidia and
phaseoliform spores. They usually have specific odours that
differ from the spermatic smell typical of most species in the
Rimosae s.s. clade. Inocybe maculata smells like raw potatoes
or Tuber, I. cookei like honey, I. erubescens like perfumed soap,
I adaequata and I. rhodiola like beetroot, and I. quietiodor like
Lactarius quietus, that is, both sourish and sweetish. Having
specific odours is a character they share with the species
in sect. Cervicolores. However, odour is a very difficult and
subjective character to use and although a spermatic smell
characterizes most species in the Rimosae s.s. clade some
species have other characteristics, e.g. I. melliolens Kühner
(1988), which smells of honey when drying.
We found that the species traditionally placed in sect. Rimosae
did not form a monophyletic clade. Instead they are distributed
over two strongly supported clades: Maculata and Rimosae
s.s. (Fig 1). The Maculata group clusters with sect. Cervicolores and the two combined represent subg. Inosperma in
a new stricter sense. A more narrowly defined sect. Rimosae
emerges as an independent supported clade well separated
from Inosperma s.s.
There is a trend in the Maculata clade for the stipe base to be
distinctly bulbous. This characteristic is present in I. cookie,
I. maculata, I. maculata forma fulva, and I. quietiodor, while in
I. adaequata, I. erubescens, and I. rhodiola the bulbous base
is not as pronounced. Several species are characterized by a
reddening of the flesh (I. adaequata, I. erubescens, I. rhodiola)
and this trait occurs also among species in Cervicolores.
In the study by Matheny (2006) a division of sect. Rimosae was
indicated although only one representative of the Rimosae s.s.
clade was included. In a recent biogeographic study of Inocybaceae more representatives of the Rimosae s.s. clade were
included and the split topology again supported (Matheny et
al. 2009). Matheny uses Pseudosperma as the clade name for
what is here called Rimosae s.s.
Inocybe maculata is known as a variable species with considerable differences in cap colour and presence of velar remnants.
These observations correspond to a high divergence among
the sequences generated from specimens initially identified as
I. maculata in a wide sense. The specimens we have sequenced
can be divided in two morphotypes which also seem to correlate
with ecological preferences. One type has a chocolate brown
cap, often covered with conspicuous, white velar remnants.
It grows associated with Carpinus, Corylus, Fagus, Quercus,
and Tilia on rich soils, usually on calcareous ground. This type
fits with the original description of I. maculata but unfortunately
the specimens representing this morphotype do not form a
monophyletic clade and the sequence divergence indicates
that more than one species are involved (Fig.1, 4a). The other
morphotype is more yellow to reddish brown and has less or no
Through our morphological investigations we were able to correlate 21 terminal groups within clades Maculata and Rimosae
s.s. with morphologically distinct species (Fig. 1). The molecular
support is based on data from nLSU, mtSSU, 5.8S and a few
conservative regions of ITS, leaving out the variable regions of
ITS because of aligning problems. The ITS region is the locus
that has been most commonly used for species delimitation of
fungi (Kõljalg et al. 2005, Kõljalg & Larsson 1998, Larsson &
Örstadius 2008, Nilsson et al. 2008). In general Inocybe species
show a high sequence divergence in the ITS region. Closely
related species often deviate in several substitutions and insertion/deletion events and are therefore easy to identify using
simple sequence comparison (Altschul et al. 1997). We also
Fig. 2 One of the equally most parsimonious trees obtained from the maximum parsimony analysis
of the Rimosae s.s. subclade A, presented as a mid-point rooted phylogram. Bootstrap values are
indicated on branches.
88
5 changes
I. rimosa TK97/156
I. rimosa SJ04/007
I. rimosa PAM06112703
I. rimosa EL75/05
I. rimosa PAM03110904
78
I. rimosa EL211/06
I. rimosa AO2008/0250
90
I. rimosa EL118/08
I. rimosa EL 102/04
99
I. melliolens PAM05052303
99
I. melliolens EL 224/06
I. cfr sororia Kuoljok0512
98
100
I. cfr sororia JV15200
I. sororia DQ917657/EU600863
I. cfr rimosa JV8125
98
I. cfr rimosa PC080925
I. cfr rimosa JV26578
I. cfr rimosa PAM05061101
I. bulbosissima EL88/06
I. bulbosissima EL66/05
I. bulbosissima EL51/05
98
I. bulbosissima EL30/06
I. bulbosissima EL37/06
I. bulbosissima EL75/07
I. cfr rimosa EL127/04
I. cfr microfastigiata EL113/06
I. cfr rimosa TAA185135
100
I. cfr rimosa JV22619
I. umbrinella PAM01102912
I. umbrinella PC081010
100
I. umbrinella JV17954
I. umbrinella PC080816
I. umbrinella JV13699
E. Larsson et al.: Relationships among species of section Rimosae
99
100
5 changes
93
I. cfr flavella EL 90/04
I. cfr flavella BJ920829
I. cfr flavella PAM05062502
I. cfr flavella JK240908
I. cfr flavella EL 118/05
I. hygrophorus EL97/06
I. flavella LAS89/030
100
I. flavella EL137/05
81
I. flavella 56/08
I. xanthocephala PAM00100606
I. sp. SJ92/010
I. sp. Stordal18318
100
I. sp. SM92/013
I. sp. SJ92/017
I. sp. JV2607
I. squamata PAM05052301
73
Fig. 3 One of the equally most parsimonious trees obtained from the maximum
I. squamata SJ08/003
100
parsimony analysis of the Rimosae s.s. subclade D, presented as a mid-point rooted
I. squamata SJ85/048
I. squamata TK96/109
phylogram. Bootstrap values are indicated on branches.
velar remnants on the cap. This type seems to be associated
with Betula, Picea, Pinus, Populus, and Salix, but also with
Dryas and Polygonum in alpine environments. It fits the concept
of I. maculata forma fulva Bon (1991, Fig. 4b) described from
a coastal dune area with Populus in northern France. Of the
seven specimens sequenced two originate from France, one of
them from the same region and ecological setting as the type
of forma fulva. Sequence data are uniform for this taxon and
clade support is strong (97 %, BPP 1.0).
The LSU sequences deposited in GenBank as I. sororia originate from a Northwest American conifer stand (Matheny et al.
2009). They are almost identical to our sequences from two
specimens from herb-rich locations and dwarf Salix in the alpine
zone of Sweden (Fig. 2). Inocybe sororia is described by Kauffman (1924) from North American frondose forests. Since we
have only studied the Swedish material and they deviate from
the descriptions given by Kauffman (1924) and Stuntz (1947)
we feel uncertain about the identity of our collections.
The Rimosae s.s. clade includes six strongly supported subclades (Fig. 1A –F) and altogether 15 terminal clades that we
could correlate to morphologically distinguishable species. In
addition Rimosae s.s. also includes several unidentified minor
terminal clades and sequences that occur on single branches
(Fig. 1). In general the species in this clade have ellipsoid to
indistinctly phaseoliform spores and the cheilocystidia tend to be
more cylindrical to clavate than in the Maculata clade. However,
the shape of the cheilocystidia is very variable even within the
same species. In this clade we also more often find that the
apex of the stipe is distinctly white pruinose to flocculose. The
spermatic odour and the presence of yellow to olive-yellow
pigments in the lamellae are characteristic for many species
in Rimosae s.s. The occurrence of oily refracting contents in
hyphae is notable and may be connected to the spermatic
odour. Kuyper (1986) found a correlation between the intensity
of the olive-yellow tone of the lamellae and the strength of the
spermatic odour.
Inocybe bulbosissima includes specimens associated with
dwarf Salix and Dryas in the alpine zone. The species is usually
regarded as a variety of I. rimosa and then named I. fastigiata
var. alpina. Another alpine species with similar characteristics
is I. microfastigiata which is said to differ by smaller spores
and a darker brown cap (Kühner 1988). A specimen with such
morphology was included in this study and did not cluster with
I. bulbosissima (Fig. 2, 4d). More specimens and sequences
are required before the circumscription of I. microfastigiata
can be clarified.
Rimosae subclade A. This clade corresponds to I. rimosa in a
wide sense and includes 33 specimens (Fig. 2) originating from
England, Estonia, France, and Scandinavia. They represent
most of the large variation in macro-morphological characters
and ecology demonstrated by the many varieties described
(Heim 1931, Favre 1955, Kühner 1988, Bon 1997). Five terminal
clades with moderately strong to strong support were recovered
and are further discussed below. Still other sequences form
unsupported groups or occur on single branches (Fig. 1, 2).
Inocybe rimosa s.s. includes nine specimens that show a great
variation in cap colours from pale to ochraceous yellow brown
to dark brown. In micro-morphology they are all very similar.
The specimens originate from different habitats ranging from
nemoral deciduous forests to boreal Picea forest. There is a
nine base pair insertion in the beginning of the ITS region in
five of the specimens but this difference could not be correlated
to differences in morphology or ecology.
The specimens named I. melliolens originate from France. In
morphology this species looks like a typical I. rimosa s.s. but
has a strong smell of honey. We have not seen any specimens
with this character from Northern Europe and the species may
have a more southern distribution, even if it is described from
Dryas vegetation in the French Alps (Bon 1997).
Inocybe umbrinella includes specimens with warm yellowish to
reddish brown caps with a dark centre and contrasting strongly
rimose and lighter periphery. The micro-morphology is almost
identical to I. rimosa. In Bresadola´s description (Bresadola
1905) it is said to grow in gravely places with Populus nigra.
Three of our specimens were collected in rather dry, sandy
environments with Helianthemum, Pinus, and Quercus ilex. In
our opinion these specimens fit the descriptions by Bresadola
(1905) and Enderle & Stangl (1981).
Some other specimens with a dark brown cap clustering with
or close to I. rimosa were first determined as I. umbrinella (Table 1). These specimens have fruit-bodies that in general are
somewhat smaller than typical I. umbrinella. Inocybe umbrinella
may also be confused with I. perlata but I. perlata usually has a
dull dark brown cap and a flattened, less pronounced umbo.
Rimosae subclade B. Inocybe obsoleta and I. perlata were
recovered as independent species. Both have rather large and
robust fruit-bodies and occur in mixed deciduous forests and
parks, often on somewhat calcareous and nutrient rich soils.
In micro-morphology they are hard to separate from I. rimosa.
The best characters for identification are the robust fruit-bodies and the dark greyish brown colour without any yellow flush
on the cap in I. perlata and the pale clay yellowish brown cap
with distinct, white velum remnants in young specimens of I.
obsoleta. Our interpretation of the name I. obsoleta is here
based on specimens from North Europe only.
Rimosae subclade C includes three specimens that originate
from Australia. We were not able to correlate them to known
species and they are provisionally named I. cfr squamata and
I. cfr rimosa. They represent two species closely related to
I. rimosa but may not occur in North Europe.
94
Rimosae subclade D includes species that are often encountered in mixed forests with Salix and Populus. We identified
I. flavella s.l., I. hygrophorus, I. squamata, and one undescribed
species (Inocybe sp.). Inocybe hygrophorus is represented by
only one specimen. It was collected in a subalpine meadow in
forest with Salix and Betula and fits the original morphological description. Sequence data confirm that it is distinct from
I. flavella. It seems to be rare or maybe overlooked as it may
be mistaken for I. flavella or I. rimosa.
The two species I. squamata and Inocybe sp. are very similar
in macro-morphology, with scattered appressed scales on the
cap. The spores are distinctly phaseoliform and narrow in Inocybe sp. while in typical I. squamata they are broadly ellipsoid
and only occasionally slightly phaseoliform. We observed that
the lamellae were more yellow and the fruit-bodies on average
larger in Inocybe sp. This possibly undescribed species also
seems to have a boreal distribution judging from the known
records from Sweden, Finland, and Norway. Inocybe squamata is, in the Nordic countries, only known from nemoral and
hemiboreal regions.
The specimens determined as I. flavella split into three supported subclades. We have included specimens that originate
from Sweden, Finland, England, and France. We identified
two morpho-types, here named I. flavella and I. cfr flavella.
The specimens are all rather similar in macro-morphology,
but show a variation in the presence of yellow pigments on
lamellae and stipe and in the colour and structure of the cap.
No special odour was detected. In micro-morphology a variation in the length and shape of the spores can be observed.
In I. flavella s.s. the spores are 10–12 × 5–6 µm and usually
not phaseoliform. In the clade named I. cfr flavella the spores
are shorter 9–10.5 × 5–6 µm and often more or less phaseoliform. The analysis including the ITS region confirm the high
sequence divergence within I. flavella s.l. (Fig. 3). There are
several species and forms described as close to I. flavella (Heim
1931, Orton 1960, Kuyper 1986, Kühner 1988, Bon 1997) and
additional sequence data is needed to disentangle the entities
involved within this clade.
Rimosae subclade E. Inocybe dulcamaroides is an arcticalpine species associated with Dryas and Salix reticulata. The
two sequences representing this species are 100 % identical
throughout the ITS region despite originating from Sweden and
USA (Montana), respectively. It is reminiscent of I. dulcamara in
that it has a short stipe in comparison to its cap diameter. This
makes it a morphologically characteristic species but it is little
collected and seemingly rare or overlooked (Fig. 4c).
Rimosae subclade F includes the two species, I. arenicola and
I. mimica, which are characterized by rather large spores. They
cluster together with sequences of three specimens which could
not be matched with any species descriptions. The only uniting
factor we found in this clade was a preference for calcareous
soil conditions. Other morphological and ecological traits show
a large variation.
Most of the species discussed in this paper are typified with
material that turned out to be less suitable for DNA extraction.
Some collections are simply old, others, e.g. those of Marcel
Bon, are apparently dried under conditions that did not preserve
DNA well. Still others are very scanty, e.g. most of Kühner’s
type specimens. This situation is not at all unusual within fungal
taxonomy. If we shall be able to take full advantage of the higher
precision of species definitions made possible by molecular
data, we must make extensive use of the epitypification tool offered by ICBN. Like all typification measures, also the selection
of an epitype must be done with utmost care in order to preserve
the intentions of the original author. Our preferred method is
to first seek a profound understanding of the regional species
Persoonia – Volume 23, 2009
diversity through intense field work, then match our collections
with existing names, compare them to authoritative material,
and finally, if necessary, select epitypes from rich, molecularly
characterized collections.
This study had a focus on the species that occur in European
arctic and alpine environments and in temperate regions of
North Europe. Many of the species belonging in sect. Rimosae
which are described from North America and from the Mediterranean have yet to be sampled before a more complete
understanding of the phylogenetic diversity of the Maculata
and Rimosae s.s. clades can be achieved. Only then will it be
appropriate to fix names through epitypification.
TAXONOMY
Species of the Maculata clade identified in
Northwest Europe
Inocybe adaequata (Britzelm.) Sacc., Syll. Fung. (Abellini)
5: 767. 1887
Specimens examined. GREAT BRITAIN, England, Bucks, Kings Wood Tylers
Green, 19 Aug. 2008, P. Cullington 2008/0014. – SWEDEN, Bohuslän, Valla,
Sundsby, 1 Sept. 1979, SJ79154; Bohuslän, Tanum, Lammö, 29 Sept. 2004,
MR00022; Västergötland, Kinnekulle, Medelplana, Råbäcks munkängar,
6 Aug. 1977, SJ77120:
Inocybe cookei Bres., Fungi Trident. 2, 8–10: 17. 1892
Specimens examined. GREAT BRITAIN, Scotland, Ledmore oakwood,
14 Sept. 2006, EL191-06. – NORWAY, Buskerud, Hönefoss, Grunntjern, 28
Aug. 2003, J. Vauras 20202 (TUR-A). – SWEDEN, Västergötland, Alingsås,
Nolhagaparken, 30 Aug. 2003, EL70A-03; Alingsås, Nolhagaparken, 21
Aug. 2005, EL73-05; Alingsås, Nolhagaparken, 2 Sept. 2006, EL150-06;
Östad, Österäng, 26 Sept. 2004, EL109-04; Östad, Ekedalen, 26 Sept.
2004, EL104-04; Östad, Östad säteri, Djurgården, 4 Sept. 2008, EL67-08;
Göteborg, Botaniska Trädgården, 19 Sept. 1975, SJ386; V. Tunhem, Hunneberg, 4 Oct. 2004, MR00035; Töreboda, Älgarås, Velen, 6 Sept. 2003,
EL50-03; Grimmered, Björräsakulle, 17 Aug. 1989, SJ89002.
Inocybe erubescens A. Blytt, Videnskabs-Selskabets Skrifter.
I Math.-Naturv. Kl., 6: 54. 1905 (‘1904’)
Specimens examined. ESTONIA, Saaremaa, Tagamösa, 29 July 2004,
TAA185164. – Sweden, Närke, Askersund, Stjärnsund, 14 July 1998, K-G
Nilsson; Skåne, Genarp, Häckeberga, 7 July 1991, Bernt Hägg.
Inocybe maculata Boud., Bull. Soc. Bot. France 32: 283.
1885
Specimens examined. DENMARK, Falster, Nykøbing, Fuglsang Storskov,
3 Oct. 2007, EL136-07. – SLOVAKIA, Rimavská Sobota, Drña, 3 Oct. 2008,
EL182-08. – SWEDEN, Bohuslän, Tanum, Lammö, 29 Sept. 2004, MR00020;
Halland, Fjärås, Tjolöholm, 20 Sept. 1975, SJ389; Västergötland, Karlsborg,
Undenäs, Bölet, 5 Sept. 2003, EL45-03; Västergötland, Berg, Högsböla
ängar, Melldalaskogen, 7 Sept. 2003, EL58-03; Västergötland, Medelplana,
Råbäcks Munkängar, 5 Sept. 2003, EL41-03; Västergötland, Kinnekulle,
Medelplana, Råbäcks Munkängar, 27 Sept. 2004, EL121-04; Västergötland,
Kinnekulle, Medelplana, Råbäcks Munkängar, 27 Sept. 2004, EL126-04;
Västergötland, Alingsås, Nolhagaparken, 30 Aug. 2003, EL68-03; Västergötland, Alingsås, Nolhagaparken, 21 Aug. 2005, EL74-05.
Inocybe maculata forma fulva Bon, Doc, Mycol. 21 (no. 81):
47. 1991
Specimens examined. FRANCE, Merlimont, Pas de Calais, 3 Nov. 2006,
EL247-06; Isére, Chireas, 1 Oct. 2001, PAM01100120 (LIP). – SWEDEN, Härjedalen, Hamra, Hamrafjället, 18 Aug. 2006, EL114-08; Dalarna, Rättvik, Ö.
om Gärdsjöns sydände, 23 Aug. 1982, R. Morander 4320; Dalarna, Rättvik,
Rättviksheden, 29 Aug. 2005, SJ05-029; Närke, Lerbäck, Udden, 13 Aug.
1997, K-G Nilsson; Närke, Lekhyttan, Lunnasjön, 13 Sept. 2008, EL166-08;
Närke, Lerbäck, Runsala ravin, 11 Sept. 2008, EL134-08; Närke, Kvistbro,
Sixtorp, Gammelhyttan, 9 Sept. 2008, EL82-08; Skåne, Hässleholm, Igna-
95
E. Larsson et al.: Relationships among species of section Rimosae
a
b
c
d
Fig. 4 a. Inocybe maculata (EL182/08); b. Inocybe maculata forma fulva (EL82/08); c. Inocybe dulcamaroides (EL112/06); d. Inocybe bulbosissima
(EL75/07).
berga, 15 Sept. 2003, EL78-03; Värmland, Övre Ullerud, Torsberget SSO,
17 Aug. 1991, Bo Jansson; Lule Lappmark, Jokkmokk, SSO Messaure, 23
Aug. 2003, S. Kuoljok 0337.
Inocybe quietiodor Bon, Doc. Mycol. 6 (no. 24): 46. 1976
Specimens examined. DENMARK, Lolland, Flintinge byskov, 4 Oct. 2007,
EL142-07. – FRANCE, Isére, Claix, Le Penil, 13 Sept. 2001, PAM01091310
(LIP); Namps-au-Val, Fremoutiers, 14 Sept. 1994, RC/F94064 (LIP).
– SWEDEN, Västergötland, Alingsås, 18 July 1998, RP98/048; Västergötland,
Götene, Medelplana, 28 Sept. 1997, LAS97/067; Västergötland, Kinnekulle,
Medelplana, Råbäck, 10 Sept. 1994, LAS 94/023; Västergötland, Kinnekulle,
Österplana, 27 Sept. 2004, EL115-04; Västergötland, Kinnekulle, Medelplana,
Råbäcks Munkängar, 8 Sept. 2008, EL73-08.
Inocybe rhodiola Bres., Fungi Trident. 1: 80. 1884
Specimens examined. FRANCE, Saint-Amand, Dréve des Prés Charniers, 31 Oct. 2006, EL223-06; Isére, Saint Laurent du Pont, 1 Sept.
2000, PAM00090117 (LIP). – ITALY, Cuneo, Ceva, Alessio, 12 Sept. 1980,
Bon80091207 (LIP).
Species of the Rimosae s.s. clade identified in
Northwest Europe
Inocybe arenicola (R. Heim) Bon, Doc. Mycol. 12 (no. 48): 44.
1983 (‘1982’)
Specimens examined. ESTONIA, Saaremaa: Kaarma, Mändjala, 19 Sept.
2008, J. Vauras 26578 (TUR-A). – FRANCE, Merlimont, Pas de Calais, 2 Nov.
2006, EL238-06; Quend-les-Pines, 18 May 1983, Bon83047 (LIP). – GREAT
BRITAIN, Sandscale, Haws-Nears, Barrow on Furness, 31 Aug. 1999, RC/
GB99.014.
Inocybe bulbosissima (Kühner) Bon, Bull. Mycol. Bot.
Dauphiné-Savoie 32 (no. 126): 19. 1992
Specimens examined. FRANCE, Les Arcs 2000 (73), Lac Marloup, 24 Aug.
2000, Bon (LIP). – NORWAY, Hordaland, Ulvik, Finse, Sandalsnut, 12 Aug.
2005, EL51-05; Hordaland, Ulvik, Finse, Sandalsnut, 12 Aug. 2005, EL4705; Hordaland, Ulvik, Finse, Sandalsnut, 14 Aug. 2005, EL66-05. – SWEDEN,
Härjedalen, Tännäs, Hamra, Hamrafjället, 15 Aug. 2006, EL88-06; Torne
Lappmark, Jukkasjärvi, Latnjajaure, 3 Aug. 2006, EL30-06; Torne Lappmark,
Jukkasjärvi, Latnjajaure, 4 Aug. 2006, EL37-06; Torne Lappmark, Jukkasjärvi,
Latnjajaure, 11 Aug. 2007, EL75-07.
Inocybe dulcamaroides Kühner, Doc. Mycol. 19 (no. 74): 18.
1988
Specimens examined. SWEDEN, Härjedalen, Tännäs, Hamra, Hamrafjället,
18 Aug. 2006, EL112-06. – USA, Montana, Carbon County, Quad Creek, 8
Aug. 2008, EL29-08.
Inocybe flavella P. Karst., Meddel. Soc. Fauna Fl. Fenn. 16:
100. 1890
Specimens examined. FINLAND, Etelä-Hämä, Juupajoki, Korkeakoski,
9 Sept. 2005, EL118-05. – FRANCE, Abscon, Carriere des Peupliers, 25
Apr. 2005, PAM05042502 (LIP); Isère, Saint Laurent du Pont, 6 Oct. 2000,
PAM00100606 (LIP). – GREAT BRITAIN, England, Haycop, Shropshire, 24
Sept. 2008, G. Kibby. – SWEDEN, Bohuslän, Torslanda, Sillvik, 3 July 2004,
SJ04-005; Bohuslän, Tanum, Kalvö, 16 Sept. 2004, EL90-04; Bohuslän,
Munkedal, Foss, 9 Sept. 1989, LAS89/030; Skåne, Fågeltofta, Kronovalls
sumpskog, 21 Aug. 2005, EL137-05; Skåne, Fågeltofta, Kulladal, 21 Sept.
2005, EL137-05; Västergötland, Östad, Djurgården, 3 Sept. 2008, EL56-08;
Värmland, Övre Ullerud, Torberget, 30 Aug. 1990, B. Jansson; Värmland,
Fryksände, Fensbol, 29 Aug. 1992, B. Jansson.
96
Inocybe hygrophorus Kühner, Bull. Trimestriel Soc. Mycol.
France 71: 169. 1956 (‘1955’)
Specimens examined. FRANCE, Beaufort, Savoie, Col des Pris, 28 Aug.
2008, PAM08082801 (LIP).– SWEDEN, Härjedalen, Tännäs, Sandåsvallen,
16 Aug. 2006, EL97-06.
Inocybe mimica Massee, Ann. Bot., Lond. 18: 492. 1904
Specimens examined. SWEDEN, Öland, Penåsa, 8 Sept. 2004, TK2004114; Gotland, Tjaukle, 7 Oct. 1996, Elsa Bohus-Jensen.
Inocybe obsoleta Romagn., Bull. Trimestriel Soc. Mycol.
France 74: 145. 1958
Specimens examined. ESTONIA, Saaremaa, Torgu, Viieristi Nature Reserve, 20 Sept. 2008, J. Vauras 26619 (TUR-A). – SWEDEN, Bohuslän, Valla,
Sundsby, 12 Sept. 1982, SJ82068; Bohuslän, Torslanda, Röds skalgrusbank, 28 Aug. 2008, SJ08-006; Bohuslän, Resteröd, Ulvesund, 25 July
2004, EL17-04; Bohuslän, Resteröd, Ulvesund, 18 Sept. 2004, EL10004; Västergötland, Trollhättan, Åkerströms naturreservat, 10 Aug. 1986,
LAS86/024; Västergötland, Fors, nära Slumpån, 5 Aug. 1977, Leif Stridvall;
Värmland, Karlstad, Trangård, 15 Sept. 1989, Bo Jansson.
Inocybe perlata (Cooke) Sacc., Syll. Fung. (Abellini) 5: 774.
1887
Specimens examined. FINLAND, Varsinais-Soumi, Lohja rural commune,
Vitkkala, 7 Aug. 1988, J. Vauras 3091. – SWEDEN, Bohuslän, Uddevalla,
Kuröds skalbankar, 15 Sept. 2004, EL74-04; Värmland, Visnum, Värmlands
Säby, 22 Sept. 1994, Bo Jansson.
Inocybe rimosa (Bull.: Fr.) P. Kumm., Führer Pilzk. (Zwickau):
78. 1871
Specimens examined. ESTONIA, Hiiumaa, Käina, Kassari, Sääre, 17 Sept.
2001, J. Vauras 17954 (TUR-A). – FINLAND, Varsinais-Soumi, Lohja, Virkkala
Kyrkstad, 16 July 1998, J. Vauras 13699 (TUR-A); Varsinais-Soumi, Lohja,
Virkkala, Pähkinäniemi, 10 Aug. 1993, J. Vauras 8125 (TUR-A). – FRANCE,
Lille, Faculté du Pharmacie, 23 May 2005, PAM05052303 (LIP); Lille (Nord),
11 June 2005, PAM05061101 (LIP); Pyrénées Atlantiques, Odres, 9 Nov.
2003, PAM03110906 (LIP); Corsica, Bonifacio, La Tonnare, 27 Nov. 2006,
PAM06112703 (LIP). – GREAT BRITAIN, England, Cambs, Fowlmere RSPB
reserve, 2008, A. Outen 2008/0250; England, Nesscliffe, Shropshire, 25
Sept. 2008, P. Cullington 08.09.25; England, Essex, Hales Wood, 25 Sept.
2008, J. Darby 2008 / 0241. – SWEDEN, Bohuslän, Tanum, Kville Hjärterön,
14 Sept. 2004, EL54-04; Bohuslän, Sotenäs, Hogsäms bokskog, 15 Sept.
2004, EL71-04; Bohuslän, Tanum, Lur, Galtö, 15 Sept. 2004, EL80-04; Torne
Lappmark, Jukkasjärvi, Abisko, Björkliden, 17 Aug. 1999, J. Vauras 15200;
Västergötland, Göteborg, Sahlgrenska, 13 July 2004, SJ04-007; Västergötland, Alingsås, Kullingsberg, 19 Sept. 2004, EL102-04; Västergötland, Alingsås, Nolhagaparken, 21 Aug. 2005, EL75-05; Västergötland, Meldelplana,
Råbäcks Munkängar, 27 Sept. 2004, EL127-04; Öland, Torslunda, S. om
Tvetabäcken, 12 Oct. 1997, TK97-156.
Inocybe squamata J.E. Lange, Dansk Bot. Ark. 2 (no. 7): 39.
1917
Specimens examined. FINLAND, Varsinais-Soumi, Turku, Ilpoinen, 14 July
1987, J. Vauras 2607 (TUR-A). – FRANCE, Monbéqui, Tarn et Garonne, 11
Nov. 2003, PAM03111204 (LIP); Lille, Faculté du Pharmacie, 23 May 2005,
PAM05052301 (LIP). – NORWAY, Oppland, Östra Toten, 5 July 1977, J.Stordal
18318 (O); Oppland, Lunner, 30 July 2004, T.E. Brandrud 102-04 (O); Oslo,
Hovedöya, 19 Aug. 1985, SJ85048. – SWEDEN, Bohuslän, Torslanda, Röds
skalgrusbank, 10 Aug. 2008, SJ08-003; Bohuslän, Torslanda, Röds skalgrusbank, 28 Aug. 2008, SJ08-007; Jämtland, Lit, Niklasbodarna, 10 Aug. 1992,
SJ 92010; Jämtland, Östersund, Lövbergaparken, 11 Aug. 1992, SJ92-017;
Medelpad, Tuna, Uvberget, 19 Aug. 1992, S.Muskos 92-013; Öland, Gräsgård, Löt, SSV Solberga, 27 Aug. 1997, TK96-109.
Persoonia – Volume 23, 2009
Porquerolles, 29 Oct. 2001, PAM01102912 (LIP). – GREAT BRITAIN, England,
Oxon, Watlington Hill, 10 Oct. 2008, P. Cullington 10.10.08; England, Bucks,
Kings Wood, 16 Aug. 2008, P. Cullington 16.08.08. – ITALY, Alto Adige, Trento,
Desert, 3 June 1899, Bresadola (holotype S).
KEY TO THE SpECIES OF THE MACulATA AND
RIMosAE S.S. CLADES OCCURRINg IN NORTHwEST
EUROpE
1. Basidiocarp ± reddening with age or handling . . . . . . . 2
1. Basidiocarp not reddening . . . . . . . . . . . . . . . . . . . . . . 4
2. Pileus robust, whitish, slowly turning brick red with age or
from damage . . . . . . . . . . . . . . . . . . . . . . . I. erubescens
2. Frb red brown with a ± vinaceous tinge . . . . . . . . . . . . 3
3. Pileus robust, fibrillose, sometimes breaking up into scales,
stipe slowly staining somewhat vinaceous. Smell rather
strong, reminding of beetroot . . . . . . . . . . . I. adaequata
3. Pileus more slender, fibrillose–squamose. Stipe becoming
distinctly vinaceous red towards the base. Smell weak .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . I. rhodiola
4. With evident, distinct smell of various compounds but not
spermatic. Spores generally phaseoliform. Cheilocystidia
broadly clavate to pyriform . . . . . . . . . . . . . . . . . . . . . . 5
4. Smell, if present, spermatic. Spores variable, mostly ellipsoid. Cheilocystidia generally slenderly clavate or cylindrical . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8
5. Pileus predominantly yellow. Stipe with a distinct bulb . 6
5. Pileus brown or brownish. Stipe equal or subbulbous . 7
6. Smell of honey. Spores 7–9 × 4–5 µm, distinctly phaseoliform. Cheilocystidia pyriform . . . . . . . . . . . . . . I. cookei
6. Smell recalling Lactarius quietus, spores 8–11 × 5.5 –6.5
µm, less distinctly phaseoliform . . . . . . . . . I. quietiodor
7. Pileus hazel brown to dark brown, often with white, conspicuous velar patches at centre. Growing in nutrient-rich
Fagus or Quercus forests . . . . . . . . . . . . . . . I. maculata
7. Pileus brownish, generally with a ± fulvous tinge, white
velar patches often less evident. Growing with various
broad-leaved or coniferous trees I. maculata forma fulva
8. Pileus with scales (may sometimes disappear) . . . . . . 9
8. Pileus fibrillose-rimose, without scales . . . . . . . . . . . . 11
9. Spores 12 –15 × 6 – 8 µm, ellipsoid. Pileus > 65 mm,
reminding of I. rimosa, gills with a faint olivaceous tinge.
Stipe initially whitish, then reddish brown. Under deciduous
trees on calcareous soils. Very rare and poorly known .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . I. mimica
9. Spores smaller . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10
10. Spores 8–10 × 5.5–6.5 µm, broadly ellipsoid (Q = 1.4–1.6).
Pileus 20–50 mm, yellowish brown; lamellae initially without or with only weak yellow tinge. With deciduous trees
on calcareous soils. In temperate or hemiboreal areas .
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . I. squamata
10. Spores 8.5 –11 × 4.5 –6 µm, often somewhat phaseoliform
(Q = 1.6 – 2.0). Pileus 30 – 90 mm, yellowish to reddish
brown, outwards more yellow. Lamellae initially pale yellow.
With deciduous and coniferous trees, boreal Inocybe sp.
Inocybe umbrinella Bres., Ann. Mycol. 3 (2): 161. 1905
11. Growing with Salix repens or Pinus in dune sand along
coasts in western Europe. Pileus 25 –70 mm, initially
whitish due to thick velipellis, beneath this straw yellow or
ochraceous; gills initially white. Stipe solid, often deeply
buried in sand. Spores 12 –16 × 6–8.5 µm . . I. arenicola
11. In other habitats. Pileus generally yellow to brown . . . 12
Specimens examined. ESTONIA, Hiiumaa district, Käina commune, Kassari, 17 Sept. 2001, J. Vauras 17954 (TUR). – FINLAND, Varsinais-Suomi,
Lohja, Virkala, 16 July 1998, J. Vauras 13699 (TUR-A). – FRANCE, Ile de
12. Pileus flocculose from a thick universal veil, ochraceous
brown, 10 – 25 mm (reminding of I. dulcamara). Cheilocystidia with internal drops of brown pigments, broadly
E. Larsson et al.: Relationships among species of section Rimosae
clavate to utriform. Spores 11–14 × 7–8.5 µm. With dwarf
Salix in arctic/alpine zones . . . . . . . . . . I. dulcamaroides
12. Pileus fibrillose-rimose. Cheilocystidia without drops . 13
13. Arctic/alpine species with a distinct, white bulb at the
base and large spores, 12–15 × 6–8 µm. Pileus 10–35
mm, pale yellow, then ochraceous to reddish brown. Smell
spermatic . . . . . . . . . . . . . . . . . . . . . . . . I. bulbosissima
13. Not so . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14
14. Pileus only finely fibrillose (almost smooth in centre), pale
brownish with a yellow tinge, lamellae with a yellowish olive
tinge. Stipe almost equal, 50–80 × 8–12 mm. Spores 9–11
× 4.5–5.5 µm, phaseoliform. In mountainous areas, mixed
forest with Salix . . . . . . . . . . . . . . . . . . . . I. hygrophorus
14. Pileus distinctly fibrillose/rimose . . . . . . . . . . . . . . . . . 15
15. Pileus brown without yellow tinges . . . . . . . . . . . . . . . 16
15. Pileus not brown, with ± yellow pigments . . . . . . . . . . 17
16. Large species with acute umbo, reminding of I. rimosa.
Pileus 35–100 mm. Stipe 80–120 × 8–13 mm, becoming brownish with age. Spores 10–13 × 6–8 µm. Under
deciduous trees in forests and parks . . . . . . . . I. perlata
16. Smaller species. Pileus 20–45 mm, hazel to cinnamon
brown, usually with blunt umbo. Spores 10–13 × 5.5 –6.5
µm . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . I. umbrinella
17. Pileus with a distinct white velipellis. Lamellae without olivaceous tinge. Odour absent. Microscopically as I. rimosa.
Under deciduous trees on calcareous ground I. obsoleta
17. Pileus without distinct white velipellis . . . . . . . . . . . . . 18
18. Pileus typically distinctly umbonate and strongly rimose.
Lamellae with an olivaceous yellow tinge. Smell spermatic.
Spores 9.5 –12.5 × 6–7 µm, generally ellipsoid and only
exceptionally somewhat phaseoliform . . . . . . . I. rimosa
18. Pileus fibrillose-rimulose, not strongly rimose. Lamellae
initially clay-coloured lacking or with only a weak yellow
tinge. Smell absent. Spores 9–12 × 5–6 µm, often phaseoliform. Cheilocystidia narrow. Pileus more yellow and
less rimose . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19
19. Spores 10–12 × 5–6.5 µm, not phaseoliform. Pileus 20–60
mm, fibrillose, yellowish brown, predominantly yellow towards the margin . . . . . . . . . . . . . . . . . . . . . . . I. flavella
19. Spores 9–10.5 × 5–6 µm, ± phaseoliform . I. cfr flavella
Acknowledgements We are grateful to Penny Cullington, Alan Outen, Leif
and Anita Stridvall, Tommy Knutsson, Elsa Bohus-Jensen, Sonja Kuoljok,
Genevieve Gates, and Jukka Vauras for sharing interesting collections. We
also thank the herbaria C, GB, LIP, O, S, TAA, TUR, TUR-A, UPS for sending loans and Abisko Scientific Research Station and the Royal Swedish
Academy of Sciences for providing lodging and working space at Latnjajaure
Field Station. This work was financed by the Research Council for Environment, Agricultural Sciences, and Spatial Planning (FORMAS grant to EL), the
Swedish species initiative, Artdatabanken, SLU, Uppsala (grant dha146 /05
to EL), Kapten Carl Stenholm’s foundation, and by grants from The Royal
Society of Arts and Science in Göteborg.
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