Hydrobiologia 467: 215–228, 2002.
J. Alcocer & S.S.S. Sarma (eds), Advances in Mexican Limnology: Basic and Applied Aspects.
© 2002 Kluwer Academic Publishers. Printed in the Netherlands.
215
Hydrogeochemical and biological characteristics of cenotes in the Yucatan
Peninsula (SE Mexico)
J.J. Schmitter-Soto1 , F.A. Comı́n2,3, E. Escobar-Briones4 , J. Herrera-Silveira2 , J. Alcocer5 ,
E. Suárez-Morales1 , M. Elı́as-Gutiérrez1 , V. Dı́az-Arce2 , L.E. Marı́n6 & B. Steinich7
1 ECOSUR.
Apdo. Postal 424. Chetumal. Quintana Roo. Mexico
E-mail: jschmit@ecosur-qroo.mx
2 Centro de Investigación y de Estudios Avanzados del IPN. Unidad Mérida. Apdo. Postal 73 Cordemex.
Mérida. Yucatán. Mexico
E-mail: jherrera@mda.cinvestav.mx
3 Departamento de Ecologı́a. Universidad de Barcelona. Spain
E-mail: comin@porthos.bio.ub.es
4 Instituto de Ciencias del Mar y Limnologı́a. Universidad Nacional Autónoma de México.
Apdo. Postal 70-305. MX-04510. México D.F.
E-mail: escobri@mar.icmyl.unam.mx
5 Escuela Nacional de Estudios Profesionales Iztacala, Laboratorio de Limnologı́a. Proyecto CyMA,
UIICSE. MX-54090 Tlalnepantla. Mexico
E-mail: jalcocer@servidor.unam.mx
6 Instituto de Geofı́sica, Universidad Nacional Autónoma de México. Ciudad Universitaria. MX-04510.
México D.F.
E-mail: Imarin@tonatiuh.igeofcu.unam.mx
7 Instituto de Geofı́sica. Unidad de Ciencias de la Tierra-UNAM. Campus Juriquilla. Querétaro. MX 76001. Mexico
E-mail: birgit@mail.unicit.unam.mx
Key words: karst, tropical limnology, sinkholes, nutrients, chlorophyll, biodiversity
Abstract
Cenotes (sinkholes) are the most peculiar aquatic ecosystem of the Yucatan Peninsula (SE Mexico). They are
formed by dissolution of the carbonate rock in the karstic platform of the Yucatan Peninsula. A wide morphological
variety is observed from caves filled with ground water to open cenotes. In some cenotes, particularly those close
to the sea, underneath the fresh water one finds saltwater, where meromixis can take place. This occurs because
in the Yucatan Peninsula there is a thin lens (10s of meters thick) that floats above denser saline water. In these
cenotes, a relative enrichment of sodium related to calcium is observed while conductivity increases. In contrast, a
higher increase of calcium associated to sulfate is observed in cenotes located in SE Yucatan Peninsula. A marked
vertical stratification of the water is established during the warm and rainy season of the year (May–October).
In cenotes with good hydraulic connection with the rest of the aquifer, the water remains clear during most of
the year. However, cenotes with poor hydraulic connection with the aquifer are characterized by turbid waters and
very low light transparency. In this group of cenotes, the water column contains a high concentration of chlorophyll
(mostly due to chlorophyceans, cyanobacteria, diatoms and dinoflagellates); the hypolimnion and the sediment are
rich in organic matter and anaerobic bacteria mediated biogeochemical processes are dominant. The upper part
of the cenotes walls is well illuminated and covered by a rich microbial mat. Floating macrophytes may also
occupy part of the water surface in oligotrophic cenotes. A great variety of food web paths are represented in the
habitats occurring in the cenotes, in which few trophic levels are involved. A few endemic species (crustaceans and
fishes) have been reported from cenotes found in the Yucatan Peninsula. Because of the high organic matter input
(alochthonous) and production (autochthonous) and the low water flow, cenotes can be considered heterotrophic
systems.
216
Introduction
General characteristics of the study area
Regional studies on the ecology of aquatic ecosystems
have been constant during the development of limnology in many countries (Margalef, 1983). There is
still a need to continue and to increase the scientific
knowledge about peculiar ecosystems and unexplored
limnological regions (Gopal & Wetzel, 1995; Wetzel
& Gopal, 1999). Classifying the observed characteristics and typifying the water masses in relation with
other already known aquatic ecosystems are major
objectives of this type of studies (Hutchinson, 1957).
The Yucatan Peninsula (SE Mexico) is subject
to rapid urban development, explosive in the coastal
zone, particularly along the Caribbean littoral; proper
management of this large ecosystem is imperative and
freshwater sustainability as well as coastal water quality are subjects of major concern. The development
of limnology in the Yucatan Peninsula is increasing.
Up to date, at least 100 papers have been published
on fresh and saline waters, but our knowledge is nonetheless sparse and fragmentary (Alcocer & Escobar,
1996; Comín et al. 1996; Herrera-Silveira et al., 1998).
Part of this limnological delay (in comparison with
other regions) is due to the isolation, size and difficult access to most Yucatan Peninsula inland aquatic
ecosystems.
Because of its karstic nature, there are no rivers
in the Yucatan Peninsula, and only 12 lakes with
water volume higher than 5·105 m3 exist, none of
which occurs in the northern half (Doehring & Butler, 1974; Alcocer & Escobar, 1996). Many solution
features form small ponds (sinkholes) (in Spanish cenotes, from the Maya word ts’onot), caves, and minor
cavities (named locally sartenejas), all of them caused
by the percolation of CO2 -laden water through limestone (Alcocer & Escobar, 1996; Steinich, 1996).
They all are solution lakes in the terms described by
Hutchinson (1957). More than 7000 solution features
have been mapped just in northwest Yucatan Peninsula
(Steinich, 1996).
This paper is an overview of the general limnological characteristics of cenotes in the Yucatan Peninsula. The aim is to present a classification, their
characteristics and an interpretation of their functional
ecology.
The Yucatan Peninsula is located between 19◦ 40′ and
21◦ 37′ N and 87◦ 30′ and 90◦ 26′ W, surrounded by
the Gulf of Mexico and the Caribbean Sea (Fig. 1). It
extends over an area of 39 340 km2 , representing 2%
of the surface of the Mexican Republic. The climate
has three characteristic seasons: (1) warm and dry
season (March–May), (2) winter storm season with
occasional short showers (November–February), and
(3) rainy season from June to October.
Winds are highly seasonal, being strongest from
November to February while calm condition lasts from
January to October. Mean annual air temperature is
26.1 ◦ C with a minimum of 5 ◦ C and a maximum
of 42.5 ◦ C. Annual rainfall varies from 760 mm.yr−1
to 1198 mm.yr−1 in the north portion and from 1138
mm.yr−1 to 1440 mm.yr−1 in the southern portion.
The highest precipitation occurs in September, with
an average of 232 mm.
The Yucatan Peninsula is a calcareous platform
which originated in the Cenozoic that averages ten
meters above sea level with just one small prominent
Sierra in the center of the Peninsula, where a maximum altitude of 150 m is reached (Stringfield & LeGrand, 1974). The Peninsula attained its present shape
in the late Pliocene (López Ramos, 1975); however,
large eolianites were deposited on the coast during the
Holocene, and reefs are still developing in the north
and east (Ward et al., 1985). There are Pleistocene
marine deposits in the east, north and northeast coasts
of the Peninsula, in Laguna de Términos (SW) and
some interior paleolakes. In Campeche, the Eocenic
terrain reaches the coast (López Ramos, 1975). The
maximum interglacial sea level was at the time 30 m
higher than today (Back, 1985). Present sea level was
attained only 5500 years ago (Ward et al., 1985); in the
early Holocene sea level was some 100 m lower than
today (Buskirk, 1985).
Wilson (1980) classified the Peninsula in 14
physiographic districts. Eight of them are represented in the northern half (Fig. 1), where cenotes are
more abundant: (1) the coastal zone, geologically the
youngest, where most of the anchialine cenotes appear; (2) the district of Mérida, within the Ring of
Cenotes (Marín, 1990); (3) the district of Chichén Itzá,
with more cenotes and a coarser relief than Mérida;
(4) the Puuc district, on the Sierrita de Ticul; (5) the
Bolonchén district, with a less developed karst landscape; (6) the district of Cobá, with geologic faults,
some of them filled with water; (7) the district of Río
217
Figure 1. Map of the Yucatan Peninsula, with the physiographic districts within the study area (modified from Wilson, 1980).1, coastal zone.
2, Mérida. 3, Chichén Itzá. 4, Puuc. 5, Bolonchén. 6, Cobá. 7, Rı́o Bec. 8, Rı́o Hondo.
Bec, partly outside the study area, and differing from
it by a higher altitude and the presence of rivers; and
(8) the Hondo river district (basin), partly outside the
study area.
The Yucatan Peninsula receives on the average
172 158 ×106 m3 of rainwater per year. Average annual rainfall increases from the northwest (500 mm)
towards the southeast (2000 mm). About 85% of the
precipitation is evapotranspired. The aquifer of the Yucatan Peninsula is a karstic aquifer characterized by its
high permeability. Karst features such as underground
channels and caverns (cenotes) are widely present
throughout the Peninsula (Steinich et al., 1996). The
aquifer is unconfined, except for a narrow band parallel to the coast, where it is confined (Perry et al., 1989).
Ground water flows through a dual-porosity medium:
flow occurs through the rock matrix and through frac-
tures, joints and dissolution features. Discharge of
the aquifer occurs both as diffuse flow throughout
the coast and as springs (found both inshore and offshore). Many cenotes in the North of the Peninsula
are located along a semicircle, known as the Ring of
Cenotes, which is centered in Chicxulub (a village in
the north coast, on the east of Progreso) (Marín et al.,
1990). It has been proposed that this distribution of
cenotes is associated with the Chicxulub Impact Crater
(Sharpton et al., 1992, 1993). The density of cenotes
along the ring varies between one and a few cenotes
per kilometer (Marín et al., 1990). This zone has been
shown to act as an underground river or groundwater
trough (Marín, 1990; Velázquez, 1995; Perry et al.,
1995; Steinich & Marín, 1996; Steinich et al., 1996).
The two intersections of the ring with the coast
give rise to a high density of submarine springs (Marín
218
et al., 1990). The water table throughout the Yucatan
Peninsula is less than two meters above mean sea level
(Marín, 1990; Steinich & Marín, 1996). The hydraulic
gradient is very low, on the order of 7–10 mm per kilometer (Marín, 1990). As a result, the aquifer is a thin
freshwater lens that floats above denser, saline water.
Steinich & Marín (1996) have shown that salt water
is found more than 110 km from the coast. This salt
water has a dual origin: salt water intrusion and dissolution of evaporites (Perry et al., 1995; Velázquez,
1995).
Parallel to the coast, in the ‘ciénagas’ or wetlands,
another type of cenote – locally known as ‘petén’ – is
found where ground water dissolves the limestone as
it travels along the flow lines. When it approaches the
coast, CO2 escapes, and as a result the groundwater
precipitates calcium carbonate sealing the intergranular space in the rocks. This is the process that is
confining the aquifer parallel to the coast (Perry et
al., 1989). However, within this area, there are large
cenotes that formed when sea level was lower than
today. Since these cenotes range between 5 and 15 m
in diameter, the precipitation of calcium carbonate can
not seal these large cavities. Thus, they act as artesian
springs (Marín et al., 1988). As brackish water is discharged into the ciénaga, it mixes with the waters from
the swamp, creating radial patterns in salinity which
in turn are colonized by different mangrove species
that can tolerate different salinity concentrations. The
‘petenes’, when observed from the distance, show up
as islands in the middle of the ‘ciénaga’.
There are 16 kinds of vegetation characterizing the
Peninsula, the most widely distributed are: the low caducifolium forest, medium subcaducifolium forest and
medium subperennifolium forest, the two first covering the north and central regions of the Yucatan State
and the other covering mostly Campeche and Quintana
Roo. Redzine and litosol are among the dominant soils
than cover the Peninsula (Flores & Espejel, 1994).
Origin and types of cenotes
The main process in the formation of cenotes is the
dissolution of the limestone by carbonic acid. In areas
where there is a significant soil cover, the CO2 concentration may increase by orders of magnitude (in
the Yucatan Peninsula it takes place towards the southeast), resulting in waters that are more aggressive (i.e.
with a higher capacity to dissolve the rocks). The CO2
involved in the process may not be alochthonous, but
organically generated in situ (Gaona-Vizcayno et al.,
1980). A second process that can contribute to the
dissolution of the carbonate rocks is the mixture of
fresh and salt water, which enhances the reactivity on
aragonite and calcite (Stoessel et al., 1989). The third
process is local and of larger importance. A high concentration of H2 S has been observed in the water of
several cenotes as a consequence of the reduction of
the accumulated organic matter. The H2 S may, then,
dissolve the rock within these horizons (Stoessel et al.,
1993). Microbial activity associated to all these processes contributes to the formation of cenotes (Martin
& Brigmon, 1994).
We propose here that in younger (lotic) cenotes,
the water is well interconnected with the ground water through fractures, and dissolution features, and its
residence time is short. Older cenotes have a lentic
condition with slow flow and turnover through sedimentation and blocking of the water source and the
siphon. Although we may recognize that groundwater continues to flow through the cenote, many of the
pathways are blocked, and the exchange of ground and
free-overlying water in the cenote is restricted. Two
processes may restrict groundwater flow to and from
the cenote: roof or wall collapse and sedimentation.
This idea is proposed on the marked geochemical changes observed. Thus, it is suggested that
the lentic cenotes are fed primarily by diffuse flow
(low groundwater velocities, thermal stratification and
other processes) and that the lotic cenotes are primarily fed by ground water flowing through fracture and
dissolution cavities. Lotic cenotes have clear waters,
clean, sandy or rocky bottoms, and a homogeneous,
well-oxygenated water column. Lentic or near-lentic
cenotes are turbid, thermally stratified; the surface water layer is alkaline, oversaturated with oxygen, while
water near the bottom is acid, devoid of O2 , and with
H2 S.
The cenotes have been classified according to the
stages in the process described above (Hall, 1936)
as: caves, jug-shaped, cylindrical, and plate-shaped
cenotes. Navarro-Mendoza (1988) and Marín et al.
(1990) have suggested differences between coastal and
inland cenotes. The former are shallower, 3–35 m
deep; their walls are rocky, often with compacted organic matter among mangrove roots. The latter with
depths greater than 100 m, and walls with up to 20 m
high. In both cases the diameter may go from a few
meters to more than 100 m.
The ‘petenes’, and deep inland cenotes, whose
walls penetrate below the salt/freshwater interface,
have water that is stratified based on density. This sa-
219
line stratification produces a meromixis, that is, the
partial mixing of the water column, in contrast to the
holomixis, a thorough mixture of the water mass, usually the case in lotic cenotes. Between the freshwater
layer in the surface, the mixolimnion, and the saline,
denser, bottom layer, the monimolimnion, an abrupt
transition zone occurs, the halocline. There could be
also thermal stratification (i.e. thermocline). HerreraSilveira & Comín (2000) showed that in both, lotic
and lentic, types of cenotes a thermal stratification
can be established during the dry and rainy seasons
(March–October), while the water column remains
mixed during the winter storms season (November–
February). The length of the thermal stratification in
lotic cenotes could vary from hours up to several days
according to the sheer velocity, the water column
depth, and other factors. Differences between cenotes
related to the thermocline depth may be related to the
transmission of convective heat between atmosphere
and water.
Under chemical stratification, the monimolimnion
may be stagnant and in anoxic conditions, or it may
slowly flow according to groundwater input, tides
and storms through tunnels and crevices. Most of the
cenotes found throughout the Peninsula will usually
occur in an intermediate position between these two
extreme types described (Van der Kamp, 1995).
Physical and chemical characteristics of the water in
the cenotes
The temperature is stable in lotic cenotes and it is controlled by the geometry of the flow system. Thermal
stability reflects the constancy of water temperature
below depths of 10 m (Van der Kamp, 1995). In lentic cenotes there are horizontal and vertical variations
along the year. Mean water temperature in cenotes,
24–29 ◦ C, is similar to the mean air temperature
(Alcocer et al., 1998).
The pH is also homogeneous and stable in lotic
cenotes, generally with acid values (<7). In lentic cenotes, there is a pH-gradient along the water column.
The epilimnion is usually basic. The hypolimnion is
acid, because respiration predominates, as well as the
formation of H2 S under anoxic conditions. Thus, the
range of pH goes from 6.7 to 8.0 in coastal cenotes,
and up to 8.6 in inland cenotes (Hall, 1936).
Alkalinity fluctuates widely in cenotes, because of
the variable input of meteoric water, rich in carbonates and bicarbonates (up to 696 mg l−1 CaCO3 ), and
of rainwater, which lowers the concentration of these
ions by dilution and by neutralization with humic acids
and tannins from the mangrove (Navarro-Mendoza,
1988; Alcocer et al., 1998).
When water enters the water table, it acquires CO2
from the soil and from the oxidation of dissolved and
particulate organic matter. These processes decrease
the concentration of O2 and increase acidity, which
in turn is neutralized by solution of the limestone.
The total dissolved solids in rainwater are concentrated by evapotranspiration and, combined with the
dissolution of minerals found in the soils, they contribute to raise the amount of total dissolved solids
(TDS) in the cenote water (Van der Kamp, 1995). TDS
in cenotes have a uniform concentration, typical of
freshwaters (<3 g l−1 ), except in those cenotes with
marine influence. Conductivity measured in a number
of cenotes (Fig. 2) ranged between 42.5 and 7390 µS
cm−1 . Salinity of ground water in the Yucatan Peninsula lies within 0.4 and 2.9 g l−1 (Velázquez, 1995). In
meromictic cenotes, water may go from fresh in the
mixolimnion to marine in the monimolimnion. The
thickness of the halocline increases in cenotes closer
to the coast, because of the mixture produced by the
friction between the freshwater mass going to the sea
and the marine water advancing inland.
A study of 71 inland water-bodies distributed
throughout the Yucatan Peninsula showed the strong
influence of the process of rock dissolution on the
major ionic composition of the water in the Yucatan
Peninsula (Comín et al., 1996). However, the two processes of salt enrichment can be important (Fig. 3).
One process, observed in localities with a higher enrichment of sodium compared to calcium, is associated
with the direct influence of seawater – via groundwater
– in localities close to the coast. The second process
occurs in places located in the southeastern zone of the
Peninsula, which includes increasing values of TDS
associated with the dissolution of sulfate-rich deposits. In this case, the enrichment in calcium relative to
sodium takes place as the total amount of dissolved
salts increases (Herrera-Silveira et al., 1998). In some
cenotes, the sulfate concentration is high (up to 2400
mg l−1 ) due to gypsum beds, but in others it lies close
to 170 mg l−1 ; precipitation may lower it to 30 mg l−1 .
Chloride increases from 70 mg l−1 in distance from
the sea (Hall, 1936) to 16 200 mg l−1 in cenotes with
marine influence.
The presence of organic matter defines the geochemical equilibrium, as shown by the recristalization
observed in cenotes with low organic activity, but
absent from those with high organic activity (Gaona-
220
Figure 2. Localization of the Yucatan Peninsula and some of the cenotes sampled.
Vizcayno et al., 1980). Its concentration depends on
the lentic or lotic character of the cenote as well as
on the size of the opening, because it determines how
much alochthonous matter can enter the cenote transported by rainwater. In situ photosynthetic production
depends on exposure to light, and thus varies according to the type of cenote. Lentic cenotes easily increase
their trophic state, favoring the production of large
amounts of organic matter (e.g. as phytoplankton).
The process brings along an increase in pH, turbidity, dissolved oxygen concentration at the surface and
anoxic, acid conditions at the bottom of the cenote.
Nutrient concentration in lotic cenotes is expected
to be lower than in lentic ones, because of the difference in turnover rate. On the other hand, vertical stratification concentrates nutrients in the hypolimnion,
where remineralization occurs, and impoverishes the
epilimnion, where primary producers consume the nutrients; in lotic cenotes, the nutrient-rich waters at the
bottom are carried to the surface, where they are once
again available to primary producers.
Phosphorus is scarce in cenotes, because the calcareous rocks favor its co-precipitation with calcium,
abundant in the karstic environment. High concentra-
Table 1. Averages (AVG), standard error (SE), minims (MIN) and
maxims (MAX) of limnological variables analyzed in 30 cenotes
(Fig. 2) once during each of the seasons of the year (‘nortes’, dry
and rainy) (from Herrera-Silveira et al., 1998)
Avg
Temperature (◦ C)
Suspended. Solids (mg l−1 )
DO (mg l−1 )
Conductivity (µS cm−1 )
pH
Alkalinity (meq l−1 )
Cl− (meq l−1 )
SO4 − (meq l−1 )
Ca++ (meq l−1 )
Mg++ (meq l−1 )
Na+ (meq l−1 )
K+ (meq l−1 )
N–NO3 − (µM)
N–NO2 − (µM)
N–NH4 + (µM)
SRP (µM)
SRSi (µM)
Chlorophyll-a (mg m−3 )
26.4
59.6
4.46
1645
7.5
4.33
2.47
2.12
6.93
3.97
5.96
0.27
63.3
0.97
6.57
1.59
227.3
11.47
SE
Min
Max
0.3
9
0.3
150
0.08
0.2
0.5
0.8
0.8
0.5
1.2
0.06
8.3
0.2
1.4
0.4
19.7
2.6
22
0.3
0.82
42.5
6.31
0.8
0.11
0.06
0.99
0.29
0.20
0.03
0.52
0.02
0.09
0.02
1.48
0.11
33.5
590.7
10.6
7390
10.36
8.51
33.33
42.2
36.5
23.05
75.52
3.48
500
15
84.9
20
550
97.4
221
tion of nutrients is frequent near urban areas. Concentrations of soluble reactive P range from 0.02 to 20 µg
l−1 , with a mean of 1.59 µg l−1 (Herrera-Silveira et
al., 1998). Localities can be divided in two types based
on nitrate concentration (Pacheco & Cabrera, 1997).
Close to urban developments, farms, and agriculture,
high nitrate concentrations have been observed. In
areas with little human activity, nitrates have been observed to be more abundant affecting coastal cenotes
than in inland ones. The nitrates of the latter environments come mostly from the surrounding vegetation.
In contrast, nitrites and ammonia are scarce (Sánchez
et al., 1998). Minimum and maximum concentrations
of micronutrients observed in a number of cenotes are
summarized in Table 1 (Fig. 2).
Biota of the cenotes
Bacterioplankton, phytoplankton and primary
production
Our knowledge of the bacterioplankton in cenotes is
sparse (Edler & Dodds, 1992; Brigmon et al., 1994),
however available information from cenotes and anchialine caves of Quintana Roo shows extremely low
bacterioplankton densities even for oligotrophic environments (Alcocer et al., 1999). Chemoautotrophic
bacteria are associated to the bottom, walls, and the
halocline. Their appearance is a white-grayish mat or
floating filament (Brigmon et al., 1994; Martin et al.,
1995).
Cenotes of the Yucatan Peninsula can be considered as islands of aquatic life. A dense and tall
vegetation made of big trees (e.g. Ficus cotinifolia) is frequently found in inland cenotes (Reddell,
1981), while ‘petenes’, near the coast, may be surrounded by mangrove, especially Rhizophora mangle.
The small mangroves tree Conocarpus erecta and
the emergent macrophytes Cladium jamaicense and
Phragmites australis may also border ‘petenes’. Other
aquatic macrophytes observed in cenotes are Typha
domingensis, Acrostichum danaefolium, Nymphaea
ampla, Sagittaria lancifolia, Cabomba palaeformis,
Sesbania emerus, Rhabdadenia biflora, Thrinax radiata and Bravaisia tubiflora. In shallow cenotes, the
algae Chara is common (Esquivel, 1991; Sánchez et
al., 1991; Cabrera-Cano & Sánchez-Vázquez, 1994).
The phytoplanktic flora of cenotes is largely unknown (Hernández & Pérez, 1991) compared to other
aquatic ecosystems of the world. However, a relatively long list of species has been compiled during the
last decade (Table 2). Almost 150 species have been
Figure 3. Total dissolved solids vs. the Na(Na + Ca) ratio (from
weight data) for the localities studied in the Yucatan Peninsula.
recorded in sinkholes, where chlorophyceans, cyanophyceans and diatoms were dominant (López-Adrián
& Herrera-Silveira, 1994; Díaz-Arce, 1999; Sánchez
et al., 2002). The species composition is quite similar to the one found in other tropical and temperate
lakes (Sánchez-Molina, 1985; Esquivel, 1991; LópezAdrián et al., 1993; López-Adrián & Herrera-Silveira,
1994; Herrera-Silveira et al., 1998). Among the green
algae, the genus Monoraphidium (M. caribeum and
M. tortile) is the most common, while Aphanocapsa
(A. pulchra), Chroococcus (C. dispersus) and Microcystis (M. aeruginosa) were common cyanophyceans.
The genus Microcystis, found in eutrophic temperate
lakes during summer, is also common in freshwater
inland waters from Yucatan (Díaz-Arce, 1999). The
most frequently found diatom species are Achnanthes
gibberula, Amphora ventricosa, Cocconeis placentula
and Gomphonema lanceolatum.
The highest number of cyanobacteria and chlorophycean species are found in the winter storm and
rainy seasons in the lentic cenotes. Euglenophyceans
are poorly represented; a few species of dinophyceans
can be found in those sinkholes enriched with allocthonous organic matter.
222
Table 2. List of representative species recorded in cenotes of the Yucatan Peninsula
Cyanobacteria
Chroococcidiopsis indica
Aphanocapsa montana
Aphanocapsa pulchra
Chroococcus dispersus
Gloeocapsa polydermatica
Gloeocapsa rupestris
Gomphosphaeria aponina
Merismopedia tenuissima
Microcystis aeruginosa
Microcystis inserta
Synechocystis pevalekii
Anabaena fertilissima
Nostoc commune
Oscillatoria nigra
Trichodesmium thiebautii
Cryptophyta
Cryptomonas acuta
Cryptomonas erosa
Rhodomonas pusilla
Chlorophyta
Dictosphaerium botrytella
Coelastrum microporum
Ankyra ancora
Chlorella vulgaris
Monoraphidium caribeum
Monoraphidium circinale
Selenastrum capricornutum
Ceraterias staurastroides
Scenedesmus circumfusus
Scenedesmus opoliensis
Tetrachlorella alternans
Cosmarium portianum
Cosmarium punctulatum
Staurastrum muticum
Staurastrum pentasterias
Chlamydomonas paraserbinowi
Sphaerella lacustris
Pandorina morum
Micromonas pusilla
Chrysophyta
Chrysococcus minutus
Chrysococcus vulneratus
Dinobyron sertularia
Salpingoeca ringens
Mallomonas pulchella
Euglenophyta
Euglena agilis
Euglena sanguinea
Phacus onyx
Trachelomonas volvocinopsis
Pyrrophyta
Gonyaulax scrippsae
Amphidinium crassum
Gymnodinium grammaticum
Sphaerodinium polonicum
Peridinium simplex
Peridinium umbonatum
Scrippsiella tochoidea
Procentrum lima
Xanthophyta
Characiopsis callosa
Chloropedia plana
Merismogloea polychloris
Chlorogibba trochisciaeformis
Rhizochloris stigmatica
Neonema quadratum
Tribonema ambiguum
Bacillariophyta
Achnanthes gibberula
Cocconeis disculus
Cocconeis placentula
Cylindrotheca closterium
Denticula kuetzingii
Hantzschia amphioxys
Nitzschia closterium
Nitzschia longissima
Nitzschia scalaris
Cymbella amphicephala
Cymbella turgida
Eunotia maior
Eunotia monodon
Eunotia praerupta
Mastogloia smithii
Melosira granulata
Diploneis elliptica
Diploneis puella
Gomphonema acuminatum
Gomphonema angustatum
Gomphonema lanceolatum
Amphiprora paludosa
Anomoeneis vitrea
Frustalia vulgaris
Gyrosigma exilis
Navicula cryptocephala
Navicula recens
Pinnularia intermedia
Stauroneis undulata
Amphora copulata
Amphora ovalis
Amphora ventricosa
Chaetoceros gracilis
Chaetoceros muelleri
Rhizosolenia setigera
Cyclotella meghiniana
Stephanodiscus niagarae
Fragilaria capucina
Synedra tenera
Synedra ulna
Terpsinoe musica
Higher plants
Acrostichum danaefolium
Cladium jamaicense
Conocarpus erecta
Acoelorrhaphe wrightii
Bravaisia tubiflora
Cabomba palaeformis
Ficus cotinifolia
Nymphaea ampla
Phragmites australis
Rhabdadenia biflora
Rhizophora mangle
Sagittaria lancifolia
Sesbania emerus
Thrinax radiata
Typha domingensis
Continued on p. 223
Using the guidelines of Carlson (1977) and based
on the phytoplankton chlorophyll a concentration
measured in 30 open cenotes, the trophic index of
these cenotes can be classified into three major groups:
oligotrophic (<3 mg Ch. a m−3 ), mesotrophic (3–
20 mg Ch. a m−3 ) and eutrophic (20–150 mg Ch.
a m−3 ) (Fig. 4). Most of these cenotes remained in
the oligo-mesotrophic range, and 15% of them were
eutrophic.
Primary production studied in cenote Noc Ac in
1995 was low due to poor biomass and chlorophyll a
concentrations (Ávila et al., 1995). The limited data
existing on primary production prevent generalizations and comparisons with other tropical or temperate
waters.
Invertebrates
The knowledge of protozoan, hydrozoans, gastrotrichs, tardigrads, free-living nematodes, and annelids
is scarce (Suárez-Morales & Rivera-Arriaga, 1998).
Reports of other invertebrates (e.g. sponge: Spongilla
223
Table 2. contd.
Rotifera
Brachionus spp.
Keratella americana
Lecane aculeata
Lecane furcata
Lecane luna
Lepadella spp.
Polyarthra vulgaris
Branchiopoda
Alona spp.
Dunhevedia spp.
Euryalona spp.
Macrothrix spp.
Moina spp.
Moinadaphnia spp.
Scapholeberis spp.
Simocephalus spp.
Anguilla rostrata
Copepoda
Arctodiaptomus dorsalis
Leptodiaptomus novamexicanus
Mastigodiaptomus spp.
Mesocyclops spp.
Pseudodiaptomus marshi
Amphipoda
Hyalella azteca
Mayaweckelia cenoticola
Quadriviso lutzi
Isopoda
Bahalana mayana
Creaseriella anops
Mysidacea
Antromysis cenotensis
Decapoda
Agostocaris bozanci
Calliasmata nohochi
Creaseria morleyi
Janicea antiguensis
Parahippolyte sterreri
Procaris nov. sp.
Somersiella sterreri
Typhlatya campechae
Typhlatya mitchelli
Typhlatya pearsei
Yagerocaris cozumel
Remipedia
Speleonectes tulumensis
Thermosbaenacea
Tulumella unidens
Strongylura notata
Thorichthys meeki
Tetrapods
Bufo marinus
Crocodylus moreleti
Ctenosaura similis
Chrysemys scripta
Dermatemys mawii
Kinosternon creaseri
Kinosternon leucostomum
Kinosternon scorpoides
Leptodactylus labialis
Rhinoclemys areolata
Lophogobius cyprinoides
Ophisternon aenigmaticum
Fishes
Archocentrus octofasciatus
Astyanax aeneus
Astyanax altior
Belonesox belizanus
‘Cichlasoma’ synspilum
‘Cichlasoma’ urophthalmus
Eleotris pisonis
Floridichthys polyommus
Gambusia yucatana
Gerres cinereus
Gobiomorus dormitor
Lutjanus griseus
Megalops atlanticus
Ogilbia pearsei
Ophisternon infernale
Petenia splendida
Poecilia mexicana
Poecilia orri
Poecilia velifera
Rhamdia guatemalensis
cenota by Poirrier, 1976) were published in the seventies. Most studies have dealt with macrocrustaceans
and zooplankton.
Rotifers are one of the most diversified group,
with 102 species in only 12 sampled localities of
the Peninsula (Sarma & Elías-Gutiérrez, 1999). Eutrophic systems are characterized by the dominance
of brachionids, such as Brachionus and Keratella. In
oligotrophic cenotes, the number of species is higher,
including species of the groups Lecane, Lepadella and
bdelloids.
Up to 30 species of branchiopods have been recorded (Elías-Gutiérrez et al., 1999) in the Yucatan
Peninsula; the species are smaller in size, a fact
attributed to a more intense predation.
Ostracods were initially studied by Furtos (1936),
who described seven species, three of them within the
cave connected to the cenotes: Cypridopsis inaudita,
C. mexicana and C. yucatanensis. Danielopolina mexicana was recently described by Kornicker & Iliffe
(1989); it is the most primitive species in the genus
(Danielopol, 1990).
224
Figure 4. Trophic classification of 30 cenotes based on the phytoplankton chlorophyll a concentration.
Thirty-five copepod species have been recorded
in the Yucatan Peninsula (Suárez-Morales & Reid,
1998). The biogeography of Arctodiaptomus and Mastigodiaptomus suggests an affinity of the calanoids
of the Yucatan Peninsula with those from the insular
Caribbean (Suárez-Morales et al., 1996). Endemism is
characteristic to the region, not one copepod species is
distributed all over the Peninsula (Reid, 1990; SuárezMorales et al., 1996; Suárez-Morales & Reid, 1998).
Most cyclopoids are benthic, two Mesocyclops species
from cenotes in the Yucatan Peninsula are adapted to
planktic life (Fiers et al., 1996). Marine forms occur
in coastal cenotes.
Most amphipods occurring in cenotes derive from
marine ancestors. Some of them are cosmopolitan species, such as Hyalella azteca and Quadriviso lutzi;
others have restricted distributions, indicating a strong
isolation among cenotes (Fiers et al., 1996). The same
is true for cirolanid isopods, such as Bahalana mayana
and Creaseriella anops (Wilkens, 1982), and mysids,
among them Antromysis cenotensis (Iliffe, 1992).
In the case of decapods, diverse species, among
which Creaseria morleyi, Typhlatya mitchelli, T. pearsei and T. campechae, seem to derive from Caribbean
marine ancestors (Hobbs & Hobbs, 1976; Reddell,
1977; Wilkens, 1982). Somersiella sterreri is considered a Tethyan relict (Iliffe et al., 1983), as is the
thermosbaenacean Tulumella unidens (Cals & Monod,
1988).
Other macrocrustaceans from the Peninsula include Agostocaris bozanci, Yagerocaris cozumel,
Janicea antiguensis, Calliasmata nohochi (EscobarBriones et al., 1997) and an undescribed Procaris
(Iliffe, 1992). The remipedian Speleonectes tulumensis, one of the most primitive crustaceans, is endemic
to some localities in the region (Yager, 1987); a new
remipedian is to be described this year in caves near
Mérida (Álvarez, pers. com).
Hubbs (1936) was the first to explore systematically the ichthyofauna of the Yucatan Peninsula; he
described most of the endemic species. Fish diversity
increases southwards and in more coastal cenotes
(Wilkens, 1982; Schmitter-Soto, 1998a). The most
isolated sites are located in the geologically oldest
areas, that remained dry during the Quaternary transgressions, which have been colonized only by two
species: Rhamdia guatemalensis and Gambusia yucatana. R. guatemalensis, a fish with nocturnal habits,
could have reached this cenote through underground
tunnels (Wilkens, 1982), while G. yucatana, a small
livebearer, tolerant to environmental extreme conditions, could have arrived as hurricane-transported
gravid females.
In coastal cenotes cichlids are dominant. Other frequent and abundant species are Astyanax aeneus and
R. guatemalensis, together with poeciliids. In systems
close to the sea associated with sea inlets diverse marine invaders occur, mostly as juveniles of gerreids,
lutjanids, gobiids, eleotrids, belonids and even the
tarpon, Megalops atlanticus, and the eel, Anguilla
rostrata (Navarro-Mendoza, 1988; Schmitter-Soto,
1998a). In between these coastal cenotes and those
in more ancient zones, the fish fauna is dominated by
Astyanax altior, ‘Cichlasoma’ urophthalmus, Poecilia
mexicana and P. velifera (Wilkens, 1982), as well as
the ubiquitous Rhamdia and Gambusia.
Many fish populations in cenotes have peculiar
morphological features, and they have been described
as subspecies. The status of some of these taxa has
been questioned, but some have been included among
the vulnerable, given their reduced, isolated habitats
(Williams et al., 1989). Some subspecies include R.
225
guatemalensis decolor, R. g. depressa, R. g. sacrificii,
R. g. stygaea, ‘C.’ urophthalmus conchitae (extinct
by disappearance of its only known locality, a cenote
within the city of Mérida), ‘C.’ u. ericymba, ‘C.’ u.
mayorum and ‘C.’ u. zebra (Hubbs, 1936, 1938). The
anchialine cenotes of Tulum (northeast Yucatan Peninsula) share four endemic species with localities in
northwestern Yucatan: A. altior, P. velifera (SchmitterSoto, 1998a, b), Ophisternon infernale and Ogilbia
pearsei (Navarro-Mendoza & Valdés-Casillas, 1990).
In addition to fishes, vertebrates observed in the
waters of cenotes include crocodiles, iguanas, turtles
and anurans (Navarro-Mendoza, 1988; Pozo et al.,
1991). Many birds and bat species live temporarily in
the walls and trees of the cenotes.
Energy flow
The organic matter (OM) in cenotes has both autochthonous and alochthonous origins. The former enters
the cenotes through solar radiation and is incorporated into organic matter via aquatic primary producers
(mostly phytoplankton, rooted and floating macrophytes) and vegetation in the shores of the cenotes.
The latter enters the cenotes during the rainy season by soil lixiviation, the weathering of logs, leaves
and transport of animal carcasses, and anthropogenic
sewage. This OM is not incorporated immediately into
the trophic web by the cenote fauna. Its main components, chitin and cellulose, are slowly degraded by
fungi and bacteria. Eventually this OM dissolves and
is utilized by bacteria found on the walls of the cenote,
in the halocline and throughout the water column. Larger particulate matter is fragmented by the biological
activity and enters the detritus pathway. The larger input of external organic (and inorganic) matter and the
higher sedimentation rate in the cenotes autochthonous OM is photoautotrophic and chemoautotrophic
in origin. Sulfate-reducer bacteria in the bottom of
the cenote supports chemoautotrophy in the watersediment interface.
Most lotic cenotes have a continuous water flow
(1–3 cm s−1 ) and their photosynthetic production is
low, due to the limited availability of nitrogen and
phosphorus; it is based on the phytobenthos and the
epiphyton in the border of the cenote. Their waters are
transparent. In contrast lentic cenotes contain nutrient and phytoplankton rich waters which give brilliant
colors to the waters when they are observed from the
shores.
In lentic cenotes, cyanobacteria dwell in the photic
layer. Some insect larvae, filtering bivalves and occasionally some fishes eat these bacteria, which give a
greenish tint to the cenote waters. This production is
not fully utilized. Cyanobacteria are replaced near the
bottom or at the halocline (chemocline) by purple bacteria, which may form a turbid layer, often mistaken
as a false bottom. At the true bottom, a marine, transparent, anoxic layer is found, where non-described
associations of bacteria and fungi occur, forming large
mats. Stable isotope data confirm the origins of the two
organic carbon sources in cenotes (Pohlman, 1995).
Suspended particulate OM remaining in the cenotes is transported by the slow flow into the tunnels,
where the concentrations of organic carbon nitrogen decrease because of its use by bacteria. Some
crustaceans and fish, which specialize in particulate OM (ostracods, mysids and carideans), bacterial
film (carideans), and corpses and detritus (amphipods, isopods, thermosbaenaceans, carideans, benthic
fishes) are the final recipients of these pathways. This
fauna supports predators (carideans, remipedians, and
fishes). There is a clear-cut niche separation in the cenote (e.g. between walls and bottom), which continues
into the submerged tunnels. Potential prey and flow
velocity are the two main factors in faunal distribution
in cenotes (Culver, 1985).
Food webs in cenotes are relatively simple; few
trophic levels and an efficient energy transfer characterize them. Bacteria, fungi, algae, and protozoa
are the first levels, and non-specialized micro and
macroinvertebrates consume them. Most species are
polyphagous, and some are top consumers; as a
response to oligotrophy, all of them are starvationresistant and efficient in food processing (Culver,
1985). These food webs are fragile and easily altered
in higher trophic levels.
Epiphyte algae and macrophytes support the herbivorous food web in lotic cenotes, where crustaceans
and insect larvae are primary consumers. Isotopic
records confirm that this web is complemented by particulate matter from outside the cenote, enriched by
bacteria and assimilated by copepods, which in turn
are predated by Astyanax and other fishes. Astyanax is
a prey of top predators, notably the eel and Rhamdia,
which in other habitats tends to be an omnivore rather
than a predator (Navarro-Mendoza, 1988).
The accumulation of OM in the sediment, as well
as the anoxic or near-anoxic conditions at the bottom,
leads to the generation of H2 S or HS− (Stoessel et
al., 1993). This is transformed to S0 and subsequently
226
to sulfide by bacteria (Beggiatoa, Thiobacillus, Thiothrix) (Jorgensen, 1983). In cenotes of Quintana Roo
there are mollusks associated to bacterial patches,
probably consuming them.
Acknowledgements
The works referred to in this paper were partly supported by UNAM-DGAPA-PAPIIT (Project IN203894),
CONABIO-Mexico (Project M011) and AECI-Spain
(Programa CCIB). L. Capurro, CINVESTAV and P.
Beddows, Bristol are recognized for their helpful comments to the manuscript. The authors thank E. C. Perry
and J. Pacheco for reviewing this manuscript. We
thank H. V. Grey for her valuable linguistic revision.
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