Phytochem Rev
DOI 10.1007/s11101-016-9473-1
Endolichenic fungi: a new source of rich bioactive secondary
metabolites on the horizon
Joshua J. Kellogg
. Huzefa A. Raja
Received: 3 May 2016 / Accepted: 2 July 2016
Ó Springer Science+Business Media Dordrecht 2016
Abstract Endolichenic fungi are diverse groups of
predominantly filamentous fungi that reside asymptomatically in the interior of lichen thalli. Natural
products from endolichenic fungi, isolated from a
variety of different lichen species, have been attracting
increased attention for their potential to produce
bioactive metabolites possessing new structures and
representing different structural classes. This is evident from the steady increase of publications devoted
to endolichenic fungal metabolites over the past
decade, since the first report of endolichenic secondary
metabolites. The bioactive metabolites produced by
endolichenic fungi originate from multiple biosynthetic pathways and occupy different chemical structure classes, including steroids, quinones, terpenoids,
peptides, xanthones, sulfur-containing chromenones,
etc. Endolichenic fungal metabolites possess a diverse
array of bioactivities, such as anticancer, antiviral,
antibacterial, antifungal, and anti-Alzheimer’s disease. This review provides the first thorough assessment of endolichenic fungi, their biodiversity,
secondary metabolites, and associated bioactivity.
This review will highlight the bioactive metabolites
reported in recent years from endolichenic fungi, as
J. J. Kellogg (&) H. A. Raja
Department of Chemistry and Biochemistry, University of
North Carolina Greensboro, 435 Patricia A. Sullivan
Science Building, PO Box 26170, Greensboro,
NC 27402-6170, USA
e-mail: jjkellog@uncg.edu
well as discussing the potential of these symbiotic
fungi as sources of new, diverse natural products with
varying bioactivities.
Keywords Bioactivity Biodiversity Endolichenic
fungi Lichen Natural products
Abbreviations
AD
Alzheimer’s disease
DPPH
2,2-Diphenyl-1-picrylhydrazyl
FIC
Fractional inhibitory concentration
GPS
Global positioning system
IC50
50 % inhibitory concentration
ITS
Internal transcribed spacer
MEA
Malt extract agar
MIC
Minimum inhibitory concentration
OSMAC One-strain, many compounds
PDB
Potato dextrose broth
Endolichenic fungi
Fungal strains represent a rich source of biologically
active natural product metabolites with wide-ranging
biological activity. Although investigations into fungal metabolites date back to the 1870 s, the first
systematic survey of fungal metabolites wasn’t initiated until after World War I by Harold Raistrick
(1949). Since those initial forays into fungal secondary
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Phytochem Rev
metabolites, natural products from fungal sources
have been employed as pesticides, herbicides, antibiotics, immunosuppressants, anti-infectives, and anticancer agents (Hoffmeister and Keller 2007). And yet,
it is believed that only about 5 % of the global fungal
species have been identified (Young 1997). Fungi
occupy a wide diversity of environmental and ecological niches across the globe, including terrestrial, fresh
water, and marine environments where they function
as saprobes, symbionts, and pathogens. Groups of
highly diverse fungi reside within the internal tissue of
other organisms, living asymptomatically without any
obvious sign of infection. Endophytic fungi occur
within tissues of host plants and are dominated by
ascomycetous fungi. Endophytic fungi have received
increased attention as sources of natural products,
especially after the discovery of paclitaxel (taxol) in
the endophytic fungus Taxomyces andreanae, which
inhabits the original source of the important anticancer
drug, Taxus brevifolia (Stierle et al. 1993). Multiple
reviews have highlighted the metabolite diversity and
potential of endophytic fungi to produce pharmaceutically valuable natural products (Kaul et al. 2012;
Nisa et al. 2015; Proksch et al. 2010; Strobel et al.
2004; Tan and Zou 2001). An analogous group of
fungi inhabit the thalli of lichens in a similarly
asymptomatic manner: the endolichenic fungi.
Lichen thalli are an emergent property arising due to
symbiotic association between a fungal organism
(mycobiont) and at least one chlorophyll-containing
photosynthetic organism (photobiont) such as a micro
alga, a cyanobacterium, or both (Lutzoni and Miadlikowska 2009). In addition to the mycobiont of the
lichen, the thallus is usually home to numerous,
asymptomatic, cryptic microfungi that live in close
association with the photobiont (Arnold et al. 2009).
These diverse groups of fungi, which reside in the
interior of a lichen thallus, have been termed as
‘endolichenic fungi’ (Arnold et al. 2009; Miadlikowska et al. 2004). Endolichenic fungi were
discovered when attempts were being made to isolate
the lichen forming mycobiont into pure culture (Crittenden et al. 1995; McDonald et al. 2013; Petrini et al.
1990). These fungi are similar to the endophytic fungi
(sometimes also referred to as endophyte-like fungi)
(Arnold et al. 2009; U’Ren et al. 2016), which reside
within healthy tissues of plants and are a phylogenetically and ecologically diverse without causing any
disease symptoms (Arnold 2001, 2007; Petrini 1991).
123
The endolichenic fungi, however, are distinct from
mycobionts (Lutzoni and Miadlikowska 2009), which
make up the lichen thallus, and from lichenicolous
fungi, an ecological group of meiosporic and mitosporic fungi that can often be observed on living lichens
(Arnold et al. 2009). The endolichenic fungi consist of
mostly horizontally transmitted, functionally advantageous fungi, and include abundant taxa belonging to
diverse classes, orders and families within the
Ascomycota (Pezizomycotina) (Arnold et al. 2009;
Girlanda et al. 1997; Kannangara et al. 2009; Li et al.
2007; Petrini et al. 1990; Suryanarayanan et al. 2005;
Tripathi and Joshi 2015; U’Ren et al. 2010, 2012).
Endolichenic fungi have, of late, become a new avenue
for evaluation of bioactive secondary metabolite
chemistry in natural products research.
Cultures of endolichenic fungi over the last 10 years
have revealed potential new structures, and interest in
their production of bioactive natural products has
increased substantially. Since metabolites from endolichenic fungi were first reported 9 years ago, research
into endolichenic fungal natural products has steadily
increased, representing a small but growing body of
literature (Fig. 1). Thus, the focus of the current review
is on the progress made over the last decade by natural
product chemists and their mycology collaborators in
isolating new secondary metabolites from endolichenic fungi and their associated bioactivity. Containing
over 140 novel metabolites, this review is the first to
summarize the biodiversity, metabolites, and bioactivity of natural products derived from fungi that live in
symbiosis with lichens. This review covers the literature available in SCOPUS (http://www.scopus.com/)
up through December 2015; included articles were
found using the open text string ‘‘endolichen*’’. This
review is timely given that there has been a sudden
surge in the natural products literature on isolation of
bioactive chemical compounds from endolichenic
fungi and there is a critical need for synthesis of the
literature from the numerous studies that have been
published thus far.
Biological survey of endolichenic fungi
Distribution and biodiversity
Surveys to isolate endolichenic fungi are over a decade
old (Girlanda et al. 1997; Petrini et al. 1990;
Phytochem Rev
Fig. 1 Number of
published articles as well as
new isolated natural
products from endolichenic
fungi. Graph represents
articles and compounds
from the first reported
metabolites in 2007 through
December 2015
Suryanarayanan et al. 2005), although studies focused
on isolation of secondary metabolites are more recent
(see below). The first study to isolate an endolichenic
fungus was undertaken in 1990 by Petrini et al. (1990),
where filamentous fungi were isolated from sterilized
segments of fruticose lichens belonging to genera
Cladonia as well as Stereocaulon. The authors did not
use chemical sterilization of lichen thallus, due to the
spongy nature of the lichens, instead removing
superficial contaminants from the lichen thallus with
sterile tap water and sieve filters to achieve surface
sterilization. Subsequently, segments of the lichen
thallus were plated on 2 % malt extract, 0.4 % yeastextract, 2 % agar, amended with 50 mg L-1 chlortetracycline and 1 mg L-1 cyclosporin (Petrini et al.
1990). This study demonstrated that lichen thalli could
harbor a rich diversity of filamentous fungi belonging
to the Pezizomycotina, Ascomycota. A total of 506
fungal strain types were isolated; 166 of them were
isolated more than once. Girlanda et al. (1997) used
two foliose lichens (Parmelia taractica and Peltigera
praetexta) to study the range of fungal assemblages
present. The authors used four different surface
sterilization techniques to isolate fungi associated
with the lichens and obtained a total of 117 fungal
isolates along belonging to the Pezizomycotina,
Ascomycota (Girlanda et al. 1997). Suryanarayanan
et al. (2005) investigated five corticolous lichens (four
foliose, and one fruticose) for non-obligate microfungi
residing inside the lichen thalli in India, and also used
four different sterilization procedures. In addition to
isolating endolichenic fungi, Suryanarayana et al. also
sought to understand whether endolichenic fungi were
similar to those occurring as endophytes within the
bark (termed as phellophytes) and leaves of the trees;
hosts on which the selected lichens were investigated.
However, there was little observed overlap between
endolichenic fungi and fungal endophytes of the host
tissue (Suryanarayanan et al. 2005). Li et al. (2007)
surveyed endolichenic fungi from five families of
lichens in the Baihua mountain of Beijing, China. The
authors reported 32 taxa from 488 segments of lichen
thalli, with low similarity among the lichens studied;
most of the endolichenic fungi belonged to the phylum
Ascomycota. Tripathi and Joshi (2015)investigated
the endolichenic fungi from 14 lichen species collected in the Himalayan region of India. The authors
isolated 25 cultivable isolates using culture morphology; the isolates mostly belonged to Ascomycota, but
also to the Basidiomycota, and Mucoromycotina/
Zygomycetes (basal fungal lineages). More recently,
U’Ren et al. (2010) investigated communities of
endophytic fungi in mosses and endolichenic fungi in
lichens using ITS rDNA sequences obtained from
cultivable fungi. The authors sought to investigate
whether endolichenic fungi represent distinct ecological guilds or if they can be defined as a single group of
flexible symbiotrophs capable of colonizing plants or
lichens indiscriminately. Endolichenic fungal assemblages differed as a function of lichen taxonomy,
rather than substrate, growth form, or photobiont. The
authors found no evidence that endolichenic fungi are
saprobic fungi that have been inveigled by lichen
thalli; rather, their study revealed the distinctiveness
of endolichenic fungal communities relative to those
in living and dead plant tissues. With one notable exception, the endolichenic fungi were similar to endophytic fungi occurring in mosses (U’Ren et al.
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Phytochem Rev
2010, 2012). The aforementioned studies suggest that
like fungal endophytes of plants, endolichenic fungi
are present in virtually all lichen species that have
been examined to date, and represent a vital yet poorly
studied characteristic of lichenology.
Origins and evolution
Similar to endophytic fungi, the evolutionary origins
of endolichenic fungi are not well understood. Arnold
et al. (2009), in a recent study on phylogenetic
estimation of trophic transitions of Ascomycetes,
provided some interesting insights into the origins of
endophytism and the evolution of endolichenic fungi.
Using ancestral state reconstruction methods, which
took into account phylogenetic uncertainty; they
showed that endolichenic fungi or endolichenism
played a key role in evolution of endophytism within
the most species rich-phylum, Ascomycota. The
results of the Arnold et al. (2009) study suggest that
endolichenic fungi represent a rapid evolutionary rate
for fungal transitions to endophytic associations in
plants. This study was also the first to document the
localization of endolichenic fungi inside the lichen
thalli; the authors reported that endolichenic fungi
were rarely isolated from the mycobiont, but were
rather preferentially associated with the green algal
photobiont of the lichen thallus. The association of
endolichenic fungi with an algal photobiont underscores the ecological and evolutionary similarity of
endolichenic fungi with endophytic fungi, which
occur in every major lineage of land plants that have
been examined up to the present time (Arnold 2007;
Stone et al. 2000).
related to a recently described novel order of fungi,
Phaeomoniellales within the Eurotiomycetes (Chen
et al. 2015). U’Ren et al. utilized multigene phylogenetic analysis and reported that several isolates of
endolichenic fungi and fungal endophytes obtained
from the continental US might represent novel species
within the Xylariaceae, which require additional
study. The authors also concluded that both symbiotrophic and saprotrophic fungi reside within the
Xylariaceae, which is one of the largest and most
diverse families within the Pezizomycotina, Ascomycota (U’Ren et al. 2016). Results from studies that
have investigated endolichenic fungi suggests that the
taxonomic composition, incidence of occurrence, and
diversity are a consequence of the interplay of climatic
patterns, geographic separation, host type, and host
lineage (U’Ren et al. 2012).
A recent study by Chagnon et al. (2016) investigated the network construction that is responsible for
organization of community structure within symbiotic
fungi such as endophytic and endolichenic fungi. The
authors found that endophytic fungi were more
flexible, and less nested and connected compared to
the endolichenic fungi; meaning plant hosts were more
selective of their fungal partners (endophytes) than the
lichens that harbor endolichenic fungi. In addition, it
was noted that endolichenic fungi are host generalists
with respect to the lichens in which they occur, but
phylogenetically they are most closely related to the
endophytic fungi compared to the saprobic fungi
(Chagnon et al. 2016; U’Ren et al. 2010).
Taxonomic affiliations and community structure
Endolichenic fungi are taxonomically and ecologically distinct from both lichenicolous fungi as well as
the about 13,500 species of mycobiont fungi that form
the lichen thalli (Arnold et al. 2009; Lutzoni and
Miadlikowska 2009; Lutzoni et al. 2001). Most
species isolated, as endolichenic fungi, are representatives of the Pezizomycotina, with most taxa phylogenetically related to seven orders (Fig. 2) within the
subclass Eurotiomycetes, Dothideomycetes, Leotiomycetes, Pezizomycetes, and Sordariomycetes
(Arnold et al. 2009; U’Ren et al. 2010). A recent
paper found endolichenic fungi were phylogenetically
123
Fig. 2 Phylogenetic distribution (ordinal) of endolichenic
fungi, which have been screened for bioactive secondary
metabolites. Pleosporales was the dominant order with 34 %
followed by Xylariales, and Hypocreales with 14, and 12 %
respectively
Phytochem Rev
Isolation methods
The methods of isolating endolichenic fungi are very
similar to those of endophytic fungi. Briefly, according to U’Ren et al. (2012), lichen material is
transported to the laboratory and processed within
24–48 h of sampling. Samples are washed thoroughly
in running tap water for 30 s. Lichen thalli are cut into
small pieces, surface-sterilized, and then cut under
sterile conditions into 2 mm segments. Segments are
surface-sterilized by agitating sequentially in 95 %
ethanol for 30 s, 10 % bleach (0.5 % NaOCl) for
2 min, and 70 % ethanol for 2 min, and surface-dried
under sterile conditions (Arnold and Lutzoni 2007).
After surface sterilization, the segments are placed on
2 % malt extract agar (MEA) in Petri dishes with
Parafilm and incubated under ambient light/dark
condition at room temperature (ca. 21.5 °C) for up to
1 year (U’Ren et al. 2010, 2012). MEA needs to be
amended with antibiotics, such as Penicillin G and
Steptomycin sulphate (500 mg/l), to avoid isolation of
bacteria (see Stone et al. 2004 for a list of antibiotics).
Emergent fungi are then isolated into pure culture
(U’Ren et al. 2012). Arnold et al. (2009) utilized four
different types of surface sterilization procedures for
endolichenic fungi. In general, the longer lichen
segments were sterilized in 0.5 % NaOCl, the fewer
endolichenic fungi were recovered (Arnold et al.
2009). Additional methods of surface sterilization
methods employed for endolichenic fungi have been
outlined previously (Girlanda et al. 1997; Li et al.
2007; Petrini et al. 1990; Suryanarayanan et al. 2005).
Physiological and ecological roles
The biological roles of endolichenic fungi remain to be
explored, but it is hypothesized that endolichenic fungi
colonize the internal tissue of lichen thalli, specifically
the photobiont and get nourishment and shelter from
the host. In return, they may confer a multitude of
benefits to their lichen host by producing a suite of
biological active functional secondary metabolites.
Structural diversity and biological activities
During the past decade over 30 endolichenic microorganisms have been cultured and subjected to detailed
investigations leading to the chemical characterization
of over 140 new natural product structures, many of
which have been shown to have a variety of biological
activities (Table 1). These metabolites span a diverse
array of structural types, which are outlined below.
Alkaloids
Solid rice cultures of the endolichenic fungus Chaetomium
globosum (No. 64-5-8-2), originally isolated from the
lichen Everniastrum nepalense, yielded the novel cytochalasan alkaloid chaetoglobosin Y (1), which possessed a
macrocyclic ring with an isoindolone moiety (Zheng et al.
2014). Rice cultures of the endolichenic fungus Tolypocladium cylindrosporum, which inhabits the lichen Lethariella zahlbruckneri yielded a new pyridine-type alkaloid
tolypyridone A (2), as well as three novel tetramic acid
derivatives [tolypocladenols A1, A2, and B (3–5)] (Fig. 3)
(Li et al. 2015b). However, (1)–(5) did not evidence any
noticeable in vitro cytotoxicity against multiple cancer cell
lines (Li et al. 2015b; Zheng et al. 2014).
Quinones
Anthraquinones
Investigations into the endolichenic fungal strain
Aspergillus versicolor yielded multiple novel anthraquinone derivatives (Fig. 4). Featuring a di-furan
moiety similar to versicolorin B, 8-O-methylversicolorin A (6) and 8-O-methylversicolorin B (7) were
isolated, along with the alkylated anthraquinone 8-Omethylaverythin (8) (the methoxy artifact 10 -O-ethyl6,8-di-O-methylaverantin (9) was also isolated)
(Fig. 4) (Dou et al. 2014). The proliferation inhibition
of cancer cell lines PC-3 and H460 was evaluated
against (6)–(9). Moderate cytotoxic activity was
evidenced by (6) and (7), with IC50 values of 12.6
and 19.5 lM against PC-3 cells and 17.3 and 27.2 lM
against H460 cells, respectively (Dou et al. 2014).
The xanthoquinodins represent an unusual xanthone-anthraquinone heterdimeric skeleton that
derives from two polyketide metabolites. The first
polyketide forms an anthraquinone monomer via
decarboxylation of the terminal chain portion, and
the second a xanthone monomer by decarboxylation/
oxidization reactions, which is then fused to the
anthoquinone monomer in several different configurations (Tabata et al. 1993). Investigation into the
endolichenic fungus Chaetomium elatum (No. 63-10-
123
Phytochem Rev
Table 1 Bioactivity of isolated endolichenic fungal metabolites
Endolichenic
fungal strain
Lichen host
Natural product(s)
Biological
activity
Cell line/species strain
References
Aspergillus sp.
(No. 16-20-8-1)
Peltigera
elisabethae
var. mauritzii
Lobaria retigera
9-acetyldiorcinol B (90)
Ab42
aggregation
–
Zhao et al.
(2014)
8-O-methylversicolorin A
(6)
8-O-methylversicolorin B
(7)
Diorcinol G (87)
Cytotoxic
PC-3/H460
Dou et al.
(2014)
Cytotoxic
PC-3/H460
Cytotoxic
PC3/A549/A2780/MDA-MB-231/
HEPG2
Zhao et al.
(2014)
Xanthoquinodin A4 (10)
Cytotoxic
HL-60/SMMC-7721/A-549/MCF-7/
SW480
Chen et al.
(2013)
Xanthoquinodin A5 (11)
Cytotoxic
Xanthoquinodin A6 (12)
Cytotoxic
Xanthoquinodin B4 (13a)
Cytotoxic
Xanthoquinodin B5 (13b)
Cytotoxic
Conioxepinol B (76)
Cytotoxic
HL-60/SMMC-7721/A-549/MCF-7/
SW480
HL-60/SMMC-7721/A-549/MCF-7/
SW480
HL-60/SMMC-7721/A-549/MCF-7/
SW480
HL-60/SMMC-7721/A-549/MCF-7/
SW480
HeLa
Conioxepinol D (78)
Coniothiepinol A (80)
Cytotoxic
Antibacterial
Coniothienol A (82)
Antifungal
Antibacterial
Aspergillus
versicolor
Aspergillus
versicolor
(125a)
Chaetomium
elatum (No.
63-10-3- 1)
Lobaria
quercizans
Everniastrum
cirrhatum
Coniochaeta sp.
Xanthoria
mandschurica
Coniochaeta sp.
n/a
CR1546C
Sticta fuliginosa
Geopyxis aff.
Majalis
Pseudevernia
intensa
Myxotrichum sp.
Neurospora
terricola
Nodulisporium
sp. (No. 65-172-1)
Cetraria
islandica
Everniastrum
cirrhatum
Everniastrum
sp.
(R)-4,6,8-Trihydroxy-3,4dihydro-1(2H)naphthalenone (38)
Geopyxin A (111), acetate
and diester derivatives
Antifungal
Cytotoxic
NCI-H460/SF-268/MCF-7/PC-3M/
MDA-MB-231
Geopyxin B (112)
Cytotoxic
Geopyxin C (113), acetate
and diester derivatives
Myxodiol A (62)
Cytotoxic
Antifungal
NCI-H460/SF-268/MCF-7/PC-3M/
MDA-MB-231
NCI-H460/SF-268/MCF-7/PC-3M/
MDA-MB-231
Candida albicans (sc5314)
Myxotrichin A (64)
Myxotrichin D (67)
Terricollene A (93)
Cytotoxic
Cytotoxic
Cytotoxic
K562
K562
HeLa/MCF-7
Terricollene C (95)
1-O-methylterricolyne (97)
Nodulisporiviridin A (122)
Cytotoxic
Cytotoxic
Ab42
aggregation
HeLa/MCF-7
HeLa/MCF-7
–
Nodulisporiviridin B (123)
Ab42
aggregation
Ab42
aggregation
–
Nodulisporiviridin C (124)
123
A549/MDA-MB-231
Enterococcus faecium (CGMCC
1.2025)/E. faecalis (CGMCC 1.2535)
Fusarium oxysporum (CGMCC 3.2830)
Enterococcus faecium (CGMCC
1.2025)/E. faecalis (CGMCC 1.2535)
Candida albicans (ATCC 10231)
–
Wang et al.
(2010b)
Wang et al.
(2010a)
Kim et al.
(2014)
Wijeratne
et al.
(2012)
Yuan et al.
(2013)
Zhang et al.
(2009)
Zhao et al.
(2015a)
Phytochem Rev
Table 1 continued
Endolichenic
fungal strain
Lichen host
Natural product(s)
Biological
activity
Cell line/species strain
Nodulisporiviridin D (125)
Ab42
aggregation
Ab42
aggregation
Ab42
aggregation
Ab42
aggregation
Ab42
aggregation
Antioxidant
–
Antioxidant
DPPH radical scavenging
Antibacterial
Staphylococcus aureus (ATCC 6538)
Phaeosphaerin A (27)
Cytotoxic
PC3/DU145/LNCaP
Preussochrome C (69)
Cytotoxic
A549
Preussochrome A (79)
7-hydroxy-3, 5-dimethylisochromen-1-one (52)
Ophiobolin P (117)
Cytotoxic
Antifungal
A549/HCT116
Candida albicans (sc5314)
antibacterial
Ophiobolin T (121)
Cytotoxic
Antibacterial
cyclo(N-methyl-L-Phe-LVal-D-Ile-L-Leu-L-Pro)
(142)
Antifungal
synergist
Bacillus subtilis/methicillin-resistant
Staphylococcus aureus
HepG2
Bacillus subtilis/methicillin-resistant
Staphylococcus aureus/Bacille
Calmette–Guerin
Candida albicans (sc5314)
Nodulisporiviridin E (126)
Nodulisporiviridin F (127)
Nodulisporiviridin G (128)
Nodulisporiviridin H (129)
Penicillium
citrinum
Parmotrema sp.
Pestalotiopsis sp.
Clavaroids sp.
Phaeosphaeria
sp.
Preussia
africana
Heterodermia
obscurata
Ramalina
calicaris
Ulocladium sp.
Everniastrum
sp.
Xylaria sp.
Leptogium
saturninum
50 -acetyl-3,5,70 -trimethoxy30 H-spiro
[cyclohexa [2,4]diene-1,10 isobenzofuran]-30 ,6-dione
(58)
4-acetyl-20 hydroxy-30 ,50 ,6-trimethoxy
biphenyl-2-carboxylic
acid (85)
Ambuic acid derivative (20)
References
–
–
–
–
DPPH radical scavenging
Samanthi
et al.
(2015)
Ding et al.
(2009)
Li et al.
(2012)
Zhang et al.
(2012)
Wang et al.
(2012)
Wang et al.
(2013b)
Wu et al.
(2011)
Only those reported to have bioactivity during the period covered by this review are listed
3-1) revealed five novel xanthoquinodins, A4–A6
(10)–(12), B4 (13a) and B5 (13b) (Fig. 4) (Chen et al.
2013). All five compounds displayed cytotoxic activity against five cancer cell lines (HL-60, SMMC-7721,
A-549, MCF-7, and SW480), with (12) possessing
low-lM activities against all cell lines (IC50 ranging
from 2 to 6 lM) (Chen et al. 2013).
Quinones
From the culture of the endolichenic fungus Pleosporales sp., six new quinone metabolites were isolated.
The cyclohexenone (5R)-5-hydroxy-2,3-dimethylcyclohex-2-en-1-one (14) was identified, along with
three terphenyl derivatives, cucurbitarins A (15) and B
(16), as well as the glycosylated cucurbitarin C (17).
Two related cucurbitarins with a cyclopentenyl core
were also isolated, cucurbitarins D (18) and E (19)
(Fig. 4) (Jiao et al. 2015).
Ambuic acid is a highly functionalized cyclohexenone, initially isolated from rainforest endophytic
fungi Pestalotiopsis sp. and Monochaetia sp. (Li et al.
2001). Ambuic acid initially evidenced antifungal
activity (Li et al. 2001), but also has moderate
123
Phytochem Rev
Fig. 3 Structures of new alkaloid compounds isolated from endolichenic fungi
antibacterial activity and quorum-sensing inhibitory
activity (Nakayama et al. 2009). Six novel derivatives
of the highly bioactive ambuic acid were isolated from
the crude extract of the endolichenic fungus Pestalotiopsis sp. inhabiting the lichen Clavaroids sp. (Ding
et al. 2009). Compounds (20)–(25) displayed varying
levels of oxidation and stereochemistry around an
ambuic acid skeleton. The dimeric quinone (26),
similar to torreyanic acid, was isolated from the same
fungal strain (Fig. 4). Metabolites (20)–(26) were
screened for antibacterial activity against a panel of
Gram-positive and Gram-negative bacterial strains.
Only (20) exhibited moderate inhibition of Staphylococcus aureus (IC50 of 27.8 lM, compared to
43.9 lM for ambuic acid), and none of these compounds demonstrated antifungal activity against
Aspergillus fumigatus (Ding et al. 2009).
Few perylenequinonoid pigments have been discovered, and those originate mostly from Ascomycete
fungi (Zhou and Liu 2010). These pigments are
attractive cytotoxic metabolites, as they are transformed to excited triplet states by absorption of light
energy, which can react with oxygen to generate
reactive oxygen species that disrupt protein kinase C
activity in mammalian cells (Morgan et al. 2009).
From the endolichenic fungus Phaeosphaeria sp.,
occurring in the lichen Heterdermia obscurata, six
novel perylenequinones possessing an unusual a,bunsaturated ketone moiety were isolated, phaeosphaerins A–F (27–32) (Fig. 4) (Li et al. 2012).
123
Compounds (27)–(32) were evaluated for cytotoxicity
against PC3, DU145, and LNCaP cancer cell lines,
with (27) demonstrating growth inhibitions of PC3
(IC50 5.84 lM), DU145 (IC50 10.77 lM), and LNCaP
(IC50 10.76 lM). Further investigations revealed that
(27) accumulated in the lysosomes of tumor cells, and
its inhibitory activity was potentiated using light
irradiation (Li et al. 2012).
Three new herbarin-derived adducts—7-desmethylherbarin (33), 8-hydroxyherbarin (34), and 1-hydroxydehydroherbarin (35)—were isolated from the
endolichenic fungal strain Corynespora sp. BA-10763,
which occurs in the cavern beard lichen Usnea cavernosa (Fig. 4) (Paranagama et al. 2007; Wijeratne et al.
2010). The biosynthetically related compounds corynesporol (36) (Paranagama et al. 2007) and 9-Omethylscytalol A (37) (Wijeratne et al. 2010) were also
isolated. These pyranonapthoquinones were evaluated
for their migration inhibitory activities of PC-3M and
MDA-MD-231 cancer cell lines; none of the isolated
metabolites possessed significant inhibitory activity
(Paranagama et al. 2007; Wijeratne et al. 2010).
Other quinone derivatives
A new napthalone ((R)-4,6,8-trihydroxy-3,4-dihydro1(2H)-naphthalenone (38)) was obtained from a Costa
Rican endolichenic fungus Xylariaceae sp. CR1546C
from the lichen Sticta fuliginosa (Kim et al. 2014). The
napthalone demonstrated weak antimicrobial activity
Phytochem Rev
against Bacillus subtilis (MIC 150 lg mL-1) and
Candida albicans (MIC 100 lg mL-1) (Kim et al.
2014).
activity against B. subtilis, S. aureus, and C. albicans;
however, (39)–(44) did not show any detectable activity at the 20 lg mL-1 level (Zhang et al. 2014).
Oxygen heterocycles
Pyrones
Furanones
The new a-pyrone derivatives nodulisporipyrones A–D
(45)–(47) were isolated from a rice culture of the fungal
strain Nodulisporium sp. (65-12-7-1), symbiotic with
the lichen Everniastrum sp.(Zhao et al. 2015b), and the
novel derivatives necpyrone A, B, D, and E [(48)–(50),
respectively)] have been detected in the endolichenic
fungus Nectria sp., occurring in the lichen Pamelia sp.
(Figure 5) (Li et al. 2015a). A dehydrogenated structure,
the new metabolite necpyrone C (51), was also isolated
from Nectria sp. (Li et al. 2015a). The a-pyrones (45)–
(47) failed to demonstrate any activity in in vitro
Seven novel furanone metabolites were isolated from
the crude extract of the endolichenic fungus Peziza sp.
inhabiting the lichen Xanthoparmelia sp. (Zhang et al.
2014), the pezizolides A–G (39)–(44). Compounds
(39)–(41) contained a bis-furanone moiety, while
(42)–(44) possessed only a single furanone ring
(Fig. 5). The compounds were all tested for cytotoxicity against HeLa, A549, MCF-7, HCT116, and T24
cancer cell lines, and for potential antimicrobial
Fig. 4 Structures of new
quinone compounds isolated
from endolichenic fungi
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Phytochem Rev
Fig. 4 continued
antibacterial assays against S. aureus or E. coli
(MIC [ 1000 lg mL-1), and weak activity against
the fungi Aspergillus niger and C. albicans (MIC 31
and 250 lg mL-1, respectively) ((Zhao et al. 2015b).
And a study against six human cancer cell lines (K562,
MDA-MB-231, MCF-7, SW620, HT29, and HeLa)
showed no cytotoxicity (IC50 [ 120 lM) for compounds (48)–(51) (Li et al. 2015a).
Benzopyranoids
Endolichenic fungi have yielded a variety of benzypyranoid and coumarin derivatives, with varying bioactivity.
Two novel polyketides, 7-hydroxy-3, 5-dimethyl-isochromen-1-one (52) and 6-hydroxy-8-methoxy-3amethyl-3a,9b-dihydro-3H-furo[3,2-c]isochromene-2,5dione (53), were isolated from the endolichenic fungus
Ulocladium sp. and (53) possessed a completely novel
tricyclic skeleton as part of its structure (Fig. 5) (Wang
et al. 2012). The coumarin derivative 6,8-dihydroxy(3R)-(2-oxopropyl)-3,4-dihydroisocoumarin (54) was
123
obtained from the Costa Rican endolichenic fungus
coded CR1546C (Fig. 5) (Kim et al. 2014). The
polyketide 7-hydroxy-3, 5-dimethyl-isochromen-1-one
(52) evidenced mild antifungal activity against Candida
albicans SC 5314, possessing an IC50 of 97.9 ± 1.1 lM
(Wang et al. 2012).
The ethyl acetate extracts of the endolichenic fungi
Nigrospora sphaerica (No. 83-1-1-2, found in Parmelinella wallichiana), Alternaria alternata (No. 58-8-4-1,
from the lichen Usnea aciculifera) and Phialophora sp.
(No. 96-1-8-1, from Cetrelia braunsiana) yielded the
diastereomeric pair (?)-(2S,3S,4aS)-altenuene (55a)
and (-)-(2S,3S,4aR)-isoaltenuene (55b) (Fig. 5) (He
et al. 2012). From a suite of eight novel metabolites from
the fungus Pleosporales sp., two benzocoumarins were
isolated: 3,10-dihydroxy-4,8-dimethoxy-6-methylbenzocoumarin (56) and 3,8,10-trihydroxy-4-methoxy-6methylbenzocoumarin (57),(Jiao et al. 2015) and 50 acetyl-3,5,70 -trimethoxy-30 H-spiro [cyclohexa [2,4]diene-1,10 -isobenzofuran]-30 ,6-dione (58) was obtained
from Penicillium citrinum, an endolichenic fungal strain
Phytochem Rev
Fig. 4 continued
from a Sri Lankan Parmotrema species (Samanthi et al.
2015). The coumarin 3,8-dihydroxy-4-(4-hydroxyphenyl)-6-methylcoumarin (61) was obtained from
the endolichenic fungus Tolypocladium cylindrosporum, inhabiting the lichen Lethariella zahlbruckneri
(Fig. 5) (Li et al. 2015b). Of the benzocoumarins from
endolichenic fungi, (58) demonstrated moderate antioxidant activity, scavenging the 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical with an IC50 value of
159.7 ± 22.3 lg mL-1.
Altenusin derivatives originate from polyketide
biosynthesis pathways, generally containing seven
acetate units and forming either a bicyclic or tricyclic
ring skeleton, such as 6/6/6, found with altenunenes, or
6/6/5 common to the rubralactones. Two new
altenusins, phialophoriol (59) and xinshengin (60),
were isolated from a Phialophora spp. (No. 39-1-5-1)
obtained from the lichen Cladonia ochrochlora Flörke
(Fig. 5). Xinshengin (60) is composed of a unique
altenuene/tetrahydrofuran-fused tetracyclic skeleton,
with rings of 6/6/6/5 (Ye et al. 2013).
Myxidiol A (62), a novel austdiol analog, was
isolated from the endolichenic fungus Myxotrichum sp.
on the lichen Cetraria islandica (Fig. 5). This compound is remarkable in that it is the first endolichenic
fungal metabolite isolated containing a halogen, a
chlorine atom located at position five. Myxidiol A (62)
demonstrated showed minimal antifungal activity
against Candida albicans (sc5314) with a MIC of
128 lg mL-1 (Yuan et al. 2013).
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Phytochem Rev
Fig. 5 Structures of new oxygen-containing herterocyclic compounds isolated from endolichenic fungi
123
Phytochem Rev
Fig. 5 continued
123
Phytochem Rev
Xanthones
Sulfur-containing chromenones
Endolichenic fungi have demonstrated a great deal of
biosynthetic plasticity in the production of xanthones
and xanthone derivatives. The xanthone conioxanthone A (63) was isolated from a culture of Coniochaeta sp. originating on the lichen Xanthoria
mandschurica (Fig. 5) (Wang et al. 2010b). A Myxotrichum sp. living in the lichen Cetraria islandica
yielded three related fulvic acid derivatives myxotrichin A–C (64)–(66), and a citromycetin analog
myxotrichin D (67) (Fig. 5). Of the four xanthone
derivatives from Myxotrichum sp., (64) and (67)
demonstrated weak in vitro cytotoxic activity against
the K562 cell line, with IC50 values 32 and 20 lM,
respectively (Yuan et al. 2013). The xanthone derivative preussochromone B (68) was isolated from
Preussia africana (living in the lichen Ramalina
calicaris), which also yielded preussochromone C
(69), with a corymbiferone skeleton (Fig. 5). Compound (69) was highly cytotoxic against A549 cells,
with an IC50 of 5.8 lM, yet evidenced no activity
(IC50 [ 20 lM) against MCF-7, HeLa, and HCT116
cell lines (Zhang et al. 2012). Finally, oxisterigmatocystin D (70) was isolated from Aspergillus sp. (No.
16-20-8-1) associated with the lichen Peltigera elisabethae (Zhao et al. 2014).
Coniofurol A (71) was identified as a new
member of the furochromenone class of oxygen
heterocycles, possessing the representative ringcontracted xanthone structure with novel substituents on the aryl and furan rings (Fig. 5) (Wang
et al. 2010b). Preussochromes D–F (72)–(74) were
similarly ring-contracted xanthones from solid cultures of an endolichenic fungus Preussia africana
(Fig. 5) (Zhang et al. 2012). And novel ringexpanded xanthones were discovered from Coniochaeta sp. Conioxepinols A–D (75)–(78) possessed the base oxepinochromenone skeleton, with
differing configurations at C7 and C8 (for conioxepinol A–C) and C3 and C6 (for conioxepinol D)
and altered substitution patterns on the aryl and
oxepine rings (Fig. 5) (Wang et al. 2010b). Conioxepinol B (76) showed modest cytotoxicity activity
against HeLa cell line, with an IC50 value of 36 lM,
while conioxepinol D (78) demonstrated cytotoxcity
against A549 and MDA-MB-231 cells, possessing
IC50 values of 40 and 41 lM, respectively (Wang
et al. 2010b).
Several relatively rare sulfur-containing chromenone
structures have been isolated from endolichenic fungal
cultures. Preussochromone A (79), isolated from the
fungus Preussia africana, was found to possess a 3,4dihydrothiopyrano[2,3-b]chromen-5(2H)-one structure,
which had not previously been detected in a naturallyoccurring product, only as a synthetic derivative (Majumdar and Jana 2001; Palmisano et al. 2007; Zhang et al.
2012). Preussochromone A (79) demonstrated significant
cytotoxic activity against A549 and HCT116 cell lines,
with IC50 values of 8 and 11 lM, respectively (Zhang
et al. 2012). Three ring-altered, sulfur-contaning xanthone derivatives were observed in cultures of the
endolichenic fungus Coniochaeta sp. (Figure 5). Coniothiepinols A (80) and B (81) are the first recorded
naturally-occurring thiepinols, containing the unique 4,5dihydro-2H-thiepino[2,3-b]chromen-6(3H)-one skeleton. Coniothiepinol A (80) has a distinctive C5–C8 ether
linkage, resulting in a 8-oxa-2-thia-bicyclo[3.2.1]octane
partial structure. Coniothienol A (82) possessed a ringcontracted 2H-thieno[2,3-b]chromen-4(3H)-one base
structure (Wang et al. 2010a). When evaluated against
Enterococcus faecium (CGMCC 1.2025) and E. faecalis
(CGMCC 1.2535), (82) demonstrated significant activity
against the two Gram-positive bacterial strains (IC50
values of 2.00 and 4.89 lg mL-1, respectively), and (80)
showed modest inhibition against the Gram-positive
strains (3.93 and 11.51 lg mL-1, respectively) as well as
the plant pathogen Fusarium oxysporum (CGMCC
3.2830) with an IC50 of 13.12 lg mL-1 (Wang et al.
2010a).
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Simple aromatic compounds
Simple aromatic structures, or aromatic rings bound
together by carbon–carbon or ether linkages represent
a family of natural product skeletons observed in
endolichenic fungi. Discovery efforts involving the
endolichenic fungal strain Scopulariopsis sp. (occurring on Cladonia gracilis) led to the isolation of two
new naphthalene derivatives, 1-(40 -hydroxy-30 ,50 dimethoxy-phenyl)-1,8-dimethoxynaphthalen-2(1H)one (83) and 1,8-dimethoxynaphthalen-2-ol (84)
(Fig. 6) (Yang et al. 2012). The biphenyl compound
4-acetyl-20 -hydroxy-30 ,50 ,6-trimethoxy biphenyl-2carboxylic acid (85) was isolated from Penicillium
Phytochem Rev
Fig. 6 Structures of new
simple aromatic compounds
isolated from endolichenic
fungi
citrinum (Fig. 6), an endolichenic fungal strain from a
Sri Lankan lichen Parmotrema sp., and demonstrated
radical scavenging activity in a DPPH assay with an
IC50 value of 69.6 lg mL-1 (Samanthi et al. 2015).
Four biphenyl ether compounds, diorcinols F–H
(86)–(88) and 3-methoxyviolaceol-II (89), were found
in the endolichenic fungus Aspergillus versicolor
(125a) from the lichen Lobaria quercizans (Fig. 6)
(Li et al. 2015c), and another biphenyl, 9-acetyldiorcinol B (90), was isolated from Aspergillus sp. (No.
16-20-8-1), endolichenic with Peltigera elisabethae
var. mauritzii (Fig. 6) (Zhao et al. 2014). Aspergillus
versicolor (125a) also yielded two new tris(pyrogallol
ethers), sydowiols D (91) and E (92) (Fig. 6), which
featured a triphenyl structure joined by aryl-ether
bridges (Li et al. 2015c).
The simple phenyl ethers demonstrated a range of
bioactivities; (87) exhibited moderate cytotoxicity
against tested human cancer cell lines PC3, A549,
A2780, MDA-MB-231, and HEPG2, with IC50 values
ranging from 19.0 to 31.0 lM, yet was inactive against
Candida albicans (MIC [ 64 lg mL-1) (Li et al.
2015c). The metabolite 9-acetyldiorcinol B (90) inhibited
Ab42 aggregation at the 100 lM level (Zhao et al. 2014).
Neurospora terricola, isolated from the lichen
Everniastrum cirrhatum, has yielded several unique
allenyl and alkynyl phenyl ether structures. Terricollenes A–C (93)–(95) contained a p-(buta-2,3-dienyl
ether)phenyl moiety, similar to xyloallenolide A
(Fig. 6) (Lin et al. 2001) and the eucalyptenes (Arnone
et al. 1993), and (93) and (94) were both glycosylated
with glucose and mannose, respectively (Zhang et al.
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Phytochem Rev
2009). Three alkynyl phenyl ethers were also isolated,
terricolyne (96), 1-O-methylterricolyne (97), and 1-Oacetylterricolyne (98) (Fig. 6). Compounds (93), (95),
and (97) evidenced modest cytotoxic activity against
HeLa cells, with IC50 values ranging from 53.3 to
92.6 lM, and (93) also displayed activity against
MCF-7 cell line, with an IC50 value of 59.2 lM
(Zhang et al. 2009).
Terpenes
Sesquiterpenoids constitute a broad structural class of
natural products biosynthesized by a diverse range of
Fig. 7 Structures of new
terpenoid compounds
isolated from endolichenic
fungi
123
organisms. Eight new bisabolane sesquiterpenoids,
(-)-(R)-cyclohydroxysydonic acid (99), (-)-(7S,8R)8-hydroxysydowic acid (100), (-)-(7R,10S)-10-hydroxysydowic acid (101), (-)-(7R,10R)-iso-10-hydroxysydowic acid (102), (-)-12-acetoxy-1-deoxysydonic acid
(103), (-)-12-acetoxysydonic acid (104), (-)-12-hydroxysydonic acid (105), and (-)-(R)-11-dehydrosydonic acid (106), were isolated from the endolichenic
fungus Aspergillus versicolor (125a) living in the lichen
Lobaria quercizans (Fig. 7) (Li et al. 2015c). These
compounds are formed via a series of oxidation,
reduction, cyclization, and esterification reactions of the
bisabolane nucleus, arising from the mevalonic acid
Phytochem Rev
Fig. 7 continued
pathway (Li et al. 2015c). The fungal strain Periconia sp.
(No. 19-4-2-1), endolichenic with Parmelia sp., yielded
the novel cadinane-type sesquiterpenoid Pericoterpenoid
A (107), which demonstrated moderate antifungal
potential against Aspergillus niger (MIC 31 lg mL-1)
(Wu et al. 2015). From a Czapek’s culture of the
endolichenic fungus Ulocladium sp. (cultured from
Everniastrum sp.), novel mixed terpenoids possessing a
tricyclic core, the tricycloalternarenes F–H (108)–(110),
were identified (Fig. 7) (Wang et al. 2013a).
Ent-kaurane diterpenoids of fungal origin have
been rare and mainly reported from Gibberella
fujikuroi and Phaeosphaeria sp. L487 (Kawaide
2006), though this class of diterpenoids has frequently
been present in several plant families (Garcia et al.
2007). Obtained from the host Pseudevernia intensa,
cultures of two endolichenic fungi (Geopyxis aff.
majalis, and Geopyxis sp. AZ0066) led to the isolation
of new ent-kaurane diterpenes, geopyxins A–F (111)–
(116) (Fig. 7). Geopyxin B (112) was the only natural
geopyxin to demonstrate cytotoxicity activity in the
low micromolar range against the cancer cell lines
NCI-H460, SF-268, MCF-7, PC-3M, and MDA-MB231; however, the monoacetate and diacetate derivatives of (111) and the methyl esters of (111)–(113)
showed low or sub micromolar activities against the
cell lines, as well as activating the heat-shock response
(Wijeratne et al. 2012).
Ophiobolins are a family of naturally occurring
sesterterpenes characterized by a unique C5–C8–C5
tricyclic ring system. Via an OSMAC (one strain,
many compounds) method, wherein culture conditions
are altered to prompt production of a different
metabolite profile, cultures of Ulocladium sp. (endolichenic in Everniastrum sp.) grown on potato
dextrose broth (PDB) produced five novel ophiobolane sesterterpenes, the ophiobolins P–T (117)–(121)
(Fig. 7) (Wang et al. 2013b). Ophiobolin T (121)
exhibited strong cytotoxic activities against HepG2
with an IC50 value of 0.24 lM, and (117) and (121)
demonstrated moderate antibacterial activity against
Bacillus subtilis and methicillin-resistant Staphylococcus aureus. Ophiobolin T (121) also presented
moderate antibacterial activity against the Bacille
Calmette–Guerin strain. The heightened activity of
(121) compared to the other ophiobolins suggested
that the furan ring on the side-chain at C-15 significantly influenced the bioactivity of ophiobolin sesterterpenes (Wang et al. 2013b).
Steroids
Viridins represent a fairly unique class of natural
product sterol derivatives, featuring a furan ring fused
to a pregnane or androstane steroid nucleus at the C-4
and C-6 position. These steroid structures have
attracted interest for their potent antifungal, antibiotic,
phytotoxic, and anti-inflammatory activities (Hansen
1995; Wipf and Halter 2005). Eight novel viridins,
nodulisporiviridins A–H (122)–(129) (Fig. 8), were
isolated from the endolichenic fungus Nodulisporium
sp. (No. 65-17-2-1). The nodulisporiviridins have a
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Phytochem Rev
Fig. 8 Structures of new
steroid compounds isolated
from endolichenic fungi
unique skeleton, featuring a cleaved A ring at either
C-1 or C-10 in the 10R or 10S configuration (Zhao
et al. 2015a). All nodulisporiviridins possessed
inhibitory activity in an anti-Ab42 aggregation assay,
with nodulisporiviridin G (128) exhibiting the most
potent anti-aggregation activity (IC50 of 1.2 lM), and
all improved short-term memory in a human Ab42
transgenic AD fly model (Zhao et al. 2015a).
Progesteroids, C21 steroid skeletons possessing a
C-2 alkyl side chain at C-17, are fairly commonly
found in nature; however, the 4-methyl derivatives
are only rarely detected (De Rosa et al. 1999). From
the endolichenic fungus Nodulisporium sp. (No.
65-17-2-1), the first examples of 3,4-seco-4-methylpregnan steroids were isolated, nodulisporisteroid A
(130) and B (132) (Fig. 8) (Zheng et al. 2013). By
employing an OSMAC method, ten additional
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4-methyl-progesteroid derivatives were obtained
from the same endolichenic fungus, and were
termed nodulisporisteroids C (131) and D–L
(133)–(141) (Fig. 8). However, none of the compounds demonstrated cytotoxic activity against HL60, SMMC-7721, A-549, MCF-7, or SW480 human
cancer cell lines (Zhao et al. 2015c).
Peptides
At the time of this review, only two peptides have been
reported from endolichenic fungi. From the endolichenic fungus, Xylaria sp. (75-1-3-1), two prolinecontaining cyclopentapeptides. were isolated. Cyclo(-NMePhe-Pro-Leu-Ile-Val-) (142) and cyclo-(-LeuPro-Leu-Ile-Val-) (143) were tested for antifungal
activity against C. albicans (Fig. 9) (SC5314). While
Phytochem Rev
Fig. 9 Structures of new peptide compounds isolated from
endolichenic fungi
Fig. 10 Structures of the new allylic compound (11S,12S,13R)
11,13-dihydroxy-12-methyltetradecanoic acid, isolated from
endolichenic fungi
neither (142) or (143) evidenced antifungal activity at
the highest concentration tested (100 lg mL-1), (142)
showed synergistic activity at concentrations of
6.3 lg mL-1 in combination with 0.004 lg mL-1
ketoconazole, yielding an FIC of \0.3125 (Wu et al.
2011).
Allylic compounds
The endolichenic fungus Massarina sp. yielded a
single novel fatty acid, (11S,12S,13R) 11,13-dihydroxy-12-methyltetradecanoic acid (144) (Fig. 10)
(Yuan et al. 2015). There have been no reported
bioactivity studies or biosynthetic investigations for
this metabolite.
Conclusions
The 144 new endolichenic fungal metabolites highlighted in this review represent only a small subfraction
of endolichenic fungal chemistry. Multiple studies of
endolichenic fungi have evidenced bioactivity from
various fungal extracts, but have provided incomplete
structural identification of the bioactive constituents.
Cheon et al. (2013) examined 571 endolichenic fungi
for their antifungal properties, identifying four—
Stereocaulon sp. (1429), Stereocaulon sp. (1430),
Cryptosporiopsis sp. (0156), and Graphis sp. (1245)—
that possessed high levels of antifungal activity. While
several metabolites were identified in the active
fractions, none were isolated and confirmed for
bioactivity. Similarly, other studies have uncovered
endolichenic fungi with potent bioactivity, but complete identification of the metabolites has not yet been
reported (Hwang et al. 2011; Kannangara et al. 2009;
Kim et al. 2012; Padhi and Tayung 2015).
The new endolichenic metabolites reviewed here,
as well as previously described metabolites from these
organisms, share many similar carbon skeletons with
metabolites produced by endophytic fungi (Kharwar
et al. 2011; Kusari et al. 2012; Stierle and Stierle
2015). The overlap between endolichenic and endophytic metabolites is consistent with their biological
similarities; there exists considerable overlap in the
taxa represented in endolichenic and endophytic
fungal strains, and they are believed to perform similar
ecological roles for the host organism (Chagnon et al.
2016; U’Ren et al. 2010). However, endolichenic
fungal metabolites remain relatively distinct from the
natural products produced by lichens individually
(Boustie et al. 2011; Romagni and Dayan 2002;
Shukla et al. 2010). And despite any similarities, this
review has highlighted several instances of metabolites with novel skeletons, including the phaeosphaerins A–F (Li et al. 2012), nodulisporiviridins A–H
(Zhao et al. 2015a), Pericoterpenoid A (Wu et al.
2015), Conioxepinols A–D (Wang et al. 2010b), and
6-hydroxy-8-methoxy-3a-methyl-3a,9b-dihydro-3Hfuro[3,2-c]isochromene-2,5-dione (Wang et al. 2012),
and Coniothiepinols A and B (Wang et al. 2010a).
Thus, while endolichenic fungal metabolites do possess some overlap with endophytic fungal natural
products, they also possess novel biosynthetic pathways capable of producing novel products.
Endolichenic fungi and other microbial source of
natural products maintain a degree of biosynthetic
plasticity in producing natural product metabolites. By
applying systematic variations in the cultivation
parameters (media composition and phase, aeration,
pH, temperature, culture vessel, addition of enzyme
inhibitors, epigenetic modifiers etc.), it is possible to
increase the number of metabolites produced by a
fungal (or microbial) source. Altering the culturing
conditions increases the metabolomic diversity available to these organisms, and has been termed the ‘‘one
strain, many compounds’’ (OSMAC) approach (Bode
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Phytochem Rev
et al. 2002). Several of the endolichenic fungi have
been shown to be responsive to OSMAC approaches,
biosynthesizing new metabolites as a result of the
variations in culturing. The endolichenic fungal strain
Nodulisporium sp. (No. 65-12-7-1) was found to
produce additional 4-methyl progesteroid analogs
when grown in potato-dextrose-broth (PDB) (Zhao
et al. 2015c). Three new terpenoids, the tricycloalternarenes F–H were isolated from a Czapek’s culture
of Ulocladium sp. (CGMCC 5507) (Wang et al.
2013a), while PDB cultures of the same endolichenic
fungal strain yielded five novel ophiobolane sesterterpenes, the ophiobolins P–T. Neither of these groups
of metabolites were detected in the original rice
cultures (Wang et al. 2013b). Thus, OSMAC
approaches to probing chemical diversity in endolichenic fungi also have the potential to maximize and
further develop the natural products produced by these
microorganisms.
Furthermore, the 31 endolichenic fungi whose
metabolites have been reported here were collected
from a limited number of geographic locations
(Fig. 11). It is important to note that this data is only
presented for those references (33 of 39) that included
either GPS coordinates or a geographical descriptor,
and the inclusion of geographic data remains a key
metric across all natural product discovery efforts
(Leal et al. 2016; Oberlies et al. 2009). With estimates
for the global number of currently recognized lichens
near 20,000 species (Feuerer and Hawksworth 2007),
there remains a vast reservoir for prospective endolichenic fungi that have the potential to provide
bioactive natural products.
Further investigations at the genetic, molecular, and
population level in this field are needed for a more
thorough understanding of host–endolichenic fungi
interactions, as well as improved understanding of the
ecological role that endolichenic fungi, and their
secondary metabolites, play in the symbiosis with and
protection of the lichen’s photobiont. A recent study
on the evolution of fungal metabolic pathways
suggests that gene duplication and horizontal gene
transfer have acted together in imparting diversity to
metabolic gene clusters within the Pezizomycotina.
Fig. 11 Geographic locations of metabolite-producing endolichenic fungal strains identified in this review (Note this data is
only presented for the references that included geographic
descriptors) (Ding et al. 2009; Dou et al. 2014; He et al. 2012;
Jiao et al. 2015; Kim et al. 2014; Li et al. 2012, 2015a, b, c;
Paranagama et al. 2007; Samanthi et al. 2015; Wang et al.
2013a, b, 2012, 2010a, b; Wijeratne et al. 2010, 2012; Wu et al.
2011, 2015; Yang et al. 2012, 2015, 2013; Ye et al. 2013, Zhao
et al. 2014, 2015a, b, c; Zheng et al. 2013, 2014)
123
Phytochem Rev
These data acquired from 208 diverse fungal genomes
provides further impetus for studying endolichenic
fungi for secondary metabolites, since most fungi
isolated as endolichenic belong to the Pezizomycotina
(Wisecaver et al. 2014). More research will also aid in
creating a comprehensive understanding of the evolutionary origins of endolichenic fungi, as well as the
mechanisms and roles of their apparent genetic
plasticity in producing secondary metabolites. Understanding the ecological and genetic roles of endolichenic fungi, will aid in identifying highly active
metabolite-producing strains.
As a recently discovered reservoir of fungi ‘hidden’
within host lichens, endolichenic fungi are a potentially rich source of bioactive and chemically novel
compounds. While these discoveries are inspirational
in uncovering new areas of bioactive natural products,
challenges still exist for the future development of
endolichenic fungi discovery: (1) frequent rediscovery
of known natural products (El-Elimat et al. 2013) (2)
technical challenges associated with their purification
and structural identification; (3) traditional screening
strategies at for bioactive compounds (Kellogg et al.
2016); (4) uncultivable strains as yet another unexploited source of natural products (Nichols et al.
2010). A great deal of effort remains to unearth the
potential of endolichenic fungi as natural product
producers. However, if the current limitations of
methodologies and technologies could be overcame, a
new horizon could open up for natural products from
endolichenic fungi as novel compounds for the benefit
of human health.
Acknowledgments The authors would like to thank Drs.
Nicholas H. Oberlies and Nadja B. Cech for their insightful
comments and careful editing of the manuscript.
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