Received: 25 August 2019
Revised: 3 January 2020
Accepted: 8 January 2020
DOI: 10.1111/1541-4337.12541
COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY
Phytopathogenic organisms and mycotoxigenic fungi: Why do we
control one and neglect the other? A biological control perspective
in Malaysia
Siti Nur Ezzati Yazid1
Selamat Jinap1,2
Siti Izera Ismail3,4
Naresh Magan5
Nik Iskandar Putra Samsudin1,2
1 Laboratory
of Food Safety and Food
Integrity, Institute of Tropical Agriculture and
Food Security, Universiti Putra Malaysia,
Serdang, Malaysia
2 Department
Abstract
In this review, we present the current information on development and applications of
biological control against phytopathogenic organisms as well as mycotoxigenic fungi
of Food Science, Faculty of
Food Science and Technology, Universiti
Putra Malaysia, Serdang, Malaysia
in Malaysia as part of the integrated pest management (IPM) programs in a collective
effort to achieve food security. Although the biological control of phytopathogenic
3 Laboratory
organisms of economically important crops is well established and widely practiced
in Malaysia with considerable success, the same cannot be said for mycotoxigenic
of Climate-Smart Food Crop
Production, Institute of Tropical Agriculture
and Food Security, Universiti Putra Malaysia,
Serdang, Malaysia
4 Department
of Plant Protection, Faculty of
Agriculture, Universiti Putra Malaysia,
Serdang, Malaysia
5 Applied
Mycology Group, Cranfield Soil
and AgriFood Institute, Cranfield University,
Cranfield, UK
Correspondence
Nik Iskandar Putra Samsudin, Laboratory of
Food Safety and Food Integrity, Institute of
Tropical Agriculture and Food Security, Universiti Putra Malaysia, 43400 UPM Serdang,
Selangor, Malaysia.
Email: nikiskandar@upm.edu.my
Funding information
Malaysian Ministry of Education (MOE)
under the High Impact Centre of Excellence
(HICoE) grant scheme, Grant/Award Number:
HICoE/ITAFoS/2017/FS9
fungi. This is surprising because the year round hot and humid Malaysian tropical
climate is very conducive for the colonization of mycotoxigenic fungi and the potential contamination with mycotoxins. This suggests that less focus has been made on
the control of mycotoxigenic species in the genera Aspergillus, Fusarium, and Penicillium in Malaysia, despite the food security and health implications of exposure
to the mycotoxins produced by these species. At present, there is limited research
in Malaysia related to biological control of the key mycotoxins, especially aflatoxins, Fusarium-related mycotoxins, and ochratoxin A, in key food and feed chains. The
expected threats of climate change, its impacts on both plant physiology and the proliferation of mycotoxigenic fungi, and the contamination of food and feed commodities
with mycotoxins, including the discovery of masked mycotoxins, will pose significant
new global challenges that will impact on mycotoxin management strategies in food
and feed crops worldwide. Future research, especially in Malaysia, should urgently
focus on these challenges to develop IPM strategies that include biological control
for minimizing mycotoxins in economically important food and feed chains for the
benefit of ensuring food safety and food security under climate change scenarios.
KEYWORDS
Aspergillus, biocontrol, climate change, Fusarium, mycotoxin, Penicillium
1 BIOLOGICA L CONTROL AND
FOOD SECUR I T Y
Feeding the global population of nearly eight billion people
is indeed the most daunting challenge facing mankind in the
Compr Rev Food Sci Food Saf. 2020;19:643–669.
modern world. Food security, which is defined as “…when
all people, at all times, have physical, social, and economic
access to sufficient, safe, and nutritious food that meets their
dietary needs and food preferences to support an active and
healthy life…,” is the primary concern in addressing this
wileyonlinelibrary.com/journal/crf3
© 2020 Institute of Food Technologists®
643
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BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
challenge (FAO, 2009). Since time immemorial, agriculture
and aquaculture have been, and still are, the primary nutritional support to mankind, and act as the first pillar of food
security, which is “food availability” (that is, supply of food
through production, distribution, and exchange). The other
three pillars according to Gregory, Ingram, and Brklacich
(2005) are “food accessibility” (that is, affordability and allocation of food, as well as the preferences of individuals and
households), “food utilization” (that is, consumption of safe,
quality, and sufficient food for human health and metabolism),
and “food stability” (that is, ability to obtain food over time).
However, the continual growth in the human population and
competition for land, water, and energy will eventually and
inevitably impair our agricultural ability and capacity to produce sufficient food to feed this increasing global demand
(Godfray et al., 2010). What is more, the global agricultural
sector is also constantly left at the mercy of its old arch
enemy—pests and pathogens! It was recently estimated that
40% to 50% of crop yields in developing countries are wastefully lost to pests and crop diseases pre- and postharvest.
For developed countries such as the United States, the estimate stands at 20% to 25% (NIFA, 2015). Apart from pests
and crop diseases, weeds can also thrive in monoculture systems, thus significantly impacting on the agricultural yields
(Poggio, 2005).
Pest is a broad term frequently used and defined as any
species or strain of living organism (for example, animals,
plants, and microorganisms), usually occurring in high density in a specific niche, which results in detrimental and injurious effects on humans, animals, or plants. In agriculture, pests
are regarded as the key biotic component that can adversely
impact on agricultural yields and productivity along the supply chain, with the major abiotic component being the climate. To mitigate this, the management or eradication of crop
pests of economic importance has been practiced worldwide
by using various control measures. There are even documents
citing that pest control is as old as agriculture itself because it
has always been necessary to keep the crops pest and disease
free (Oerke, 2006). The various control measures of pests are
generally divided into three—physical/mechanical, chemical,
and biological, and have been employed either individually
or collectively before, during, or after crop cultivation as part
of an Integrated Pest Management (IPM) strategy and Good
Agricultural Practice (GAP).
Physical or mechanical pest control involves the use of simple equipment and devices as well as hands-on techniques
that form a protective barrier between the crops and the pests
(Khan & Ram, 2014; Sorensen, Mohankumar, & Thangaraj,
2016; Vincent, Hallman, Panneton, & Fleurat-Lessard, 2003).
These include controlled irrigation to minimize stresses on the
crops, crop rotation, crop monitoring, growing pest-resistant
crop varieties/cultivars through selective breeding, intercropping, seed selection, soil ploughing, the use of physical bar-
riers, nettings or trappings, timely harvesting, and trap cropping (that is, companion crops planted nearby the main crops
[companion planting] to divert pests away from infesting
the main crops; Holden, Ellner, Lee, Nyrop, & Sanderson,
2012).
Chemical pest control, on the other hand, involves the use
of chemically synthesized pesticides, which can be employed
either as solid (for example, by luring the pests to eat chemically poisoned baits), liquid (for example, by spraying formulated pesticide suspensions onto the crops or soil), or
gaseous (for example, by suffocating pests with chemically
poisoned fumigants). Apart from chemicals, there are also
plant-derived or plant-based control agents known as phytochemicals that pose lesser threat to the environments and
human health as compared to their more recalcitrant chemically synthesized counterparts. As critically reviewed by
Koul (2008), these phytochemicals, which include alkaloids,
chromenes, cucurbitacins, cyclopropanoid acids, phenolics,
polyacetylenes, quassinoids, saponins, terpenes, and their various derivatives, are usually applied as antifeedants and/or
deterrents. Additionally, there are also semiochemicals (for
example, pheromones and allelochemicals) that are defined as
substances used in plant–insect or insect–insect interactions
as complementary components to insecticide approaches in
IPM. Semiochemicals are used to effectively modify insect
pests’ behavior by affecting their survival and/or reproduction
in the effort to control their infestations on crops (El-Ghany,
2019).
Another alternative is biological control, or simply biocontrol, which is a technique to significantly reduce or permanently suppress the population density of pests to a level that
has no significant effect on the crop yield by interfering with
the pests’ ecophysiology using living organisms (Wyckhuys
et al., 2013). If properly applied, biological control could be a
long-term and self-sustaining treatment method for managing
pests (Sahayaraj, 2014) that will consequently contribute to
lower agro-operational costs. At present, there are four widely
accepted fundamental strategies in biological control (van
Lenteren, Bolckmans, Köhl, Ravensberg, & Urbaneja, 2018):
(a) natural, in which natural enemies of the pests are not
frequently noticed and consciously manipulated by humans
but their presence actually helps to regulate the population
density of their host or prey; (b) importation (classical), in
which foreign/exotic natural enemies of the pests are intentionally reared and released into new habitats or ecosystems
to regulate the population density of their host or prey; (c)
augmentation, in which natural enemies of the pests, which
are unable to survive and/or persist in the new habitats or
ecosystems, are reared in large population and mass-released
(inundative augmentation) or periodically released in smaller
numbers (inoculative augmentation) to regulate the population density of their host or prey; and (d) conservation, in
which natural enemies of the pests are aided (for example,
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
645
FIGURE 1
The principles and approaches of Integrated Plant Protection (IPP) otherwise known as Integrated Pest Management (IPM)
Note. Adapted from Frische et al. (2018)
providing them with shelters and reducing the use of chemicals that might kill them) to maintain and optimize their survival and/or effectiveness in regulating the population density of their host or prey. Figure 1 summarizes the principles
and approaches of Integrated Plant Protection (IPP) otherwise
also frequently referred to as IPM (Frische, Egerer, Matezki,
Pickl, & Wogram, 2018). The IPP or IPM pyramid in Figure 1
ideally works from the bottom up, in which preventive measures (for example, the use of tolerant/resistant crop cultivars;
crop care such as farm irrigation and crop rotation; promoting natural antagonists against crop pests) always take priority and precedent before the use of chemicals. Only when
the economic threshold is exceeded, as assessed by the risk
analysis and monitoring, would the plant protection approach
shift to biotechnological measures (for example, biological,
physical, and chemical controls). An “economic threshold” is
the pest’s population level infesting the farm or the extent of
crop damage inflicted by the pests at which the value of the
crop destroyed exceeds the cost of controlling the pest (Zalom,
2010).
Of course as climate is in a state of flux and the pests rapidly
evolve, these control measures will often have flaws and drawbacks and have to be appropriately modified. For example,
the physical control on a much larger scale requires enormous
time and manpower, which will most likely contribute to
higher operational costs, whereas the chemical control has
long been associated with high production and application
costs, human health hazards, restriction by domestic and
international regulatory limits, trade bans, residual effects,
environmental pollution, resistance development in pests,
and potential elimination of beneficial natural enemies of the
targeted pests (Bommarco, Miranda, Bylund, & Björkman,
2011). Also, as illustrated in Figure 1, a good and sustainable
IPM strategy always uses chemicals as the last resort. As for
biological control, several drawbacks have also been highlighted such as they do not function as rapidly as chemical
pesticides, their application requires special skills/knowledge,
or even worse, they prey on beneficial organism thus disrupting the natural food chain. To mitigate the latter, care and
consideration should be taken into account when developing
an efficient and successful biological control system. Simberloff in 2012 outlined four potential risks when introducing
a biological control agent: (a) direct attack on nontargets; (b)
indirect effects on nontargets (for example, competition); (c)
dispersal of the introduced biological control agent to other
area; and (d) changed relationships between the introduced
biological control agent and the native species (for example, when the introduced biological control agent multiply
uncontrollably and becomes invasive) (Simberloff, 2012). Of
course the risk of nontarget is always there (also known as the
“nontarget effect”; Louda, Pemberton, Johnson, & Follett,
2003) and has been heavily debated; that is why risk analysis
and assessment (for example, host specificity test; Kaufman
& Wright, 2017) must be critically performed before a biological control agent is introduced in the crop agro-ecosystem.
Köhl, Postma, Nicot, Ruocco, and Blum (2011) proposed
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
Production (metric tonne)
646
73.8%
20,000,000
15,000,000
10,000,000
5,000,000
10.2%
5.5%
0.8%
0.2%
0.1%
3.7% 0.1%
2.7%
2.9%
0
Crop commodities
FIGURE 2
Malaysian agricultural production for the year 2017
Note. Adapted from DOA (2019).
a 2015 data.
b
“Major industrial crops,” as managed by the Malaysian Ministry of Primary Industries. Data for other “major industrial crops” such as timber, kenaf
(Hibiscus cannabinus), and tobacco (Nicotiana tabacum) are not publicly available. “Other industrial crops” and other crop commodities are
managed by the Malaysian Ministry of Agriculture and Agro-based Industry. “Cash crops” include cassava (Manihot esculenta), groundnut (Arachis
hypogaea), maize (Zea mays), sugar cane (Saccharum officinarum), sweet potato (Ipomoea batatas), taro (Colocasia esculenta), and yam bean
(Pachyrhizus erosus). “Other industrial crops” include areca nut (Areca catechu), coconut (Cocos nucifera), coffee (Coffea arabica), mushroom
(various species), nipa palm (Nypa fruticans), roselle (Hibiscus sabdariffa), sago (Metroxylon sagu), and tea (Camellia sinensis)
nine sequential steps in selecting, developing, and introducing
a biological control agent of plant pathogens: (a) assessment
of targeted crop, disease, and markets, (b) isolation of
candidate antagonists, (c) rapid-throughput screening in
terms of production, safety, and ecology, (d) database mining
in terms of intellectual property protection, safety, ecology,
environmental risks, and marketing, (e) efficacy testing in
bioassays, (f) preliminary assessment of mass production,
(g) pilot formulation, (h) upscaling mass production and full
field testing, and (i) integration into cropping systems with
constant monitoring of its efficacy and environmental risks.
These are critically performed to prevent the disadvantages
of introducing a biological control agent outweighing its
advantages. Furthermore, as previously mentioned, biological control is never applied individually but collectively with
other measures as part of IPM or GAP programs.
In Malaysia, agriculture is the third engine that drives and
sustains the economic growth after services and manufacturing in terms of gross domestic product (GDP), with oil palm
(Elaeis guineensis) and rice (Oryza sativa) dominating the
production scene (Fahmi, Abu-Samah, & Abdullah, 2013).
Although the industrial commodity subsector (for example,
cocoa, palm oil, rubber, and timber) serves as the primary contributor to the sector’s GDP, the growth rate of the food commodity subsector (for example, fruits, rice, and vegetables)
is gradually increasing, which indicates a positive improve-
ment of the domestic food production while reducing import
dependency (Ahmad & Suntharaligam, 2009). Moreover, the
approach recently undertaken by the government to further
increase the domestic food production to feed the 32 million
population has shifted from the expansion of land for animal
rearing and crop cultivation to sustainable agricultural intensification in which farmers are encouraged to use fewer inputs
(for example, energy, water, nutrients, and pesticides) and
achieve higher productivity within similar acreage of land.
Figure 2 illustrates the agricultural production in Malaysia in
2017. Like many other countries, Malaysian agricultural productivity is also impacted by pest infestation, against which
the country has launched numerous measures in a collective
effort to combat further deterioration. Among such measures
is biological control.
Biological control has a long history in Malaysia. The
earliest available online resource dates back to 40 years ago
in 1978 on the use of the beetle Metrogaleruca obscura and
the wasp Eurytoma attiva to control the invasive weed Cordia
curassavica (tropical black sage) through defoliation and
seed destruction, respectively (Simmonds, 1980). Since then,
Malaysian agricultural authorities, particularly the Department of Agriculture (DOA) and Malaysian Agricultural
Research and Development Institute (MARDI), both under
the jurisdiction of the Ministry of Agriculture and Agro-based
Industry, have been conducting numerous research initiatives
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
to combat pest infestation on economically important crops
such as oil palm and rice paddy. Although it is understandable
why the focus has always been, and still is, on the control of
phytopathogenic organisms, it must not be forgotten that pests
come in different forms. Since the discovery of T-2 toxin
that caused alimentary toxic aleukia in Russia in the 1940s
(Joffe, 1971; Williams, 1989), and aflatoxins that killed
nearly 100,000 turkey poults in England in the 1960s (Blount,
1961; Wannop, 1961), the global scientific community has
been alarmed by the disease- and death-causing capability
of fungal secondary metabolites, which can affect both
humans and animals (Pitt & Miller, 2017). These secondary
metabolites were henceforth termed mycotoxins (from the
Greek mykes, which is fungus, and toxikon, which is poison),
and their fungal producers are known as mycotoxigenic fungi.
Being produced by several genera of microfungi, mycotoxin
contamination is in fact the secondary outcome of fungal
infestation of crop commodities, with the primary ones being
the damages and diseases such as blights, rusts, rots, and
wilts. Although just a secondary outcome, the clinical effects
of mycotoxins on humans and animals are certain with
several types of mycotoxins being classified as carcinogens
(International Agency for Research on Cancer [IARC]:
https://www.iarc.fr/; Ostry, Malir, Toman, & Grosse, 2017).
The ecophysiological conditions influencing mycotoxigenic
fungal growth and mycotoxin production as well as major
mycotoxins and their associated health risks on humans and
animals have been extensively reviewed elsewhere (Bhat, Rai,
& Karim, 2010). Nevertheless, despite Malaysian climatic
conditions (that is, tropical; warm and humid all year round)
being highly favorable for fungal proliferation, including
that of mycotoxigenic fungi, on staple crop commodities
pre- and postharvest, to the best of our knowledge thus far,
there has been very little, if any, research related to the use
of biological control agents to control mycotoxigenic fungi
and their associated mycotoxin contamination in Malaysia.
The present review therefore discusses (a) the application
of biological control agents in regulating the infestation of
phytopathogenic organisms in Malaysia, (b) the current status
of biological control against mycotoxigenic fungi in Malaysia
and the potential reasons for their lack of use, and (c) the
future directions of biological control research in Malaysia,
with a focus on mycotoxigenic fungi and mycotoxin control.
2 BIOLOGICA L CONTROL
AGAINST PH Y TOPAT H O G E N I C
ORGANISMS
Although regarded as a newly industrialized country (that is,
transitional phase between developing and developed countries), Malaysia still relies on the agriculture sector, which
647
is the nation’s third economic engine. The First (1984 to
1991), Second (1992 to 1997), and Third National Agricultural (1998 to 2010) Policies helped to shape the sector to be
productive, sustainable, and competitive in the face of agricultural challenges in a rapidly changing world. Under the various long-term and far-sighted initiatives undertaken by the
Ministry of Agriculture and Agro-based Industry, crops are
being cultivated on a larger scale and are usually well managed. Approaches such as IPM and GAP—which among others include regular monitoring, timely harvesting, supplementation and utilization of natural control agents, and the prudent use of chemicals—are being put into practice in order to
improve yield, safety, and quality of the agricultural products.
As part of a good IPM, biological control of phytopathogenic organisms has been widely applied in Malaysia
with all the four main biological control strategies (that is, natural, importation, augmentation, and conservation) have been
documented. The role of natural enemies in controlling native
pests has been recognized in economically important crops
especially oil palm, cocoa, coconut, and rice. The introduction
of parasitoid wasps Diadegma semiclausum and Diadromus
collaris in the 1970s to control Plutella xylostella (diamondback moth whose larvae destructively infest cruciferous vegetables especially cabbages) had suppressed the drawbacks of
the reduction in chemical pesticide usage (Ooi, 1992; Ooi &
Lim, 1989). The introduction of beneficial plants such as Cassia cobanensis (cassia), Turnera subulata (white buttercup),
and Antigonon leptopus (Mexican creeper) has provided shelter and supplementary food such as nectar, and encouraged the
proliferation of predators and parasites (Jamian, 2017). The
conservation of natural or introduced enemies has also been
important in insect pest management in Malaysia.
Table 1 summarizes almost 40 years of research on the biological control agents, their targeted pests/pathogens/diseases,
and their potential mechanisms of action against phytopathogenic organisms in Malaysia. Figure 3 further illustrates the distribution of the targeted crop commodities on
which research on potential biological control agents against
phytopathogenic organisms has been focused. From Figure 3,
it is apparent that oil palm—being the country’s foremost
crop in the agriculture sector—evidently receives appreciable attention and emphasis in terms of protection and prevention against diseases. The major pests of oil palm in Malaysia
include bagworm moths (Metisa plana and Pteroma pendula), bunch moths (Tirathaba rufivena), rats, rhinoceros beetles (Oryctes rhinoceros), and termites (Coptotermes curvignathus), whereas the most important diseases are Ganoderma basal stem rot (caused by Ganoderma boninense) and
Marasmius bunch rot (caused by Marasmius palmivorus)
(SALCRA, 2019). To mitigate the Ganoderma basal stem
rot, the Malaysian Palm Oil Board (MPOB), a government
agency responsible for the research and development of
palm oil industry in Malaysia, has introduced the Integrated
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
648
TABLE 1
Available publications on the use of biological control agents against phytopathogenic organisms in Malaysia (1980–2019)
Targeted pest/pathogen/disease
Application/potential mechanism
of action
Beauveria bassiana
Atteva sciodoxa (tiger moth) whose larvae
infest long jack
Spraying of conidial suspension
targeting larvae
Abood et al., 2010
Beauveria bassiana and
Paecilomyces
fumosoroseus
Plutella xylostella (diamondback moth)
whose larvae infest cabbages
Spraying of conidial suspension
Ibrahim & Low, 1993
Exserohilum longirostratum
Echinochloa crus-galli (barnyard grass),
weed infesting rice paddy fields
Spraying of conidial suspension
Ng et al., 2012
Exserohilum monoceras
Echinochloa crus-galli (barnyard grass),
weed infesting rice paddy fields
Spraying of conidial suspension
Kadir et al., 2008
Exserohilum prolatum
Rottboellia cochinchinensis (itch grass), a
noxious weed impacting crops
Soil treatment (spraying) with
conidial suspension
Alloub et al., 2009
Exserohilum rostratum
Cyperus iria (flat sedge), weed infesting
rice paddy fields
Spraying of conidial suspension
Kundat et al., 2010
Fusarium oxysporum
(non-pathogenic)
Fusarium oxysporum f. sp. cubense
(ascomycete) causing Fusarium wilt in
bananas
As an endophyte
Ting et al., 2009
Isaria fumosorosea
Coptotermes curvignathus and Coptotermes
gestroi (termites) infesting trees
Conidia germinate and penetrate
into the termite cuticle
Jessica et al., 2019
Isaria fumosorosea and
Metarhizium anisopliae
Atteva sciodoxa (tiger moth) whose larvae
infest long jack
Spraying of conidial suspension
Sajap et al., 2014
Metarhizium anisopliae var.
anisopliae
Coptotermes curvignathus (termite)
infesting oil palms
Conidia germinate and penetrate
into the termite cuticle
Hoe et al., 2009
Metarhizium anisopliae var.
major
Oryctes rhinoceros (rhinoceros beetle)
attacking oil palm fronds
Granules of mycelia and spores
attacking beetle larvae
Moslim, Kamarudin,
Wahid, 2011; Moslim
et al., 2009
Paecilomyces carneus and
Paecilomyces farinosus
Pteroma pendula (bagworm moth) whose
larvae infest oil palms
Spraying of conidial suspension
targeting larvae
Bakeri et al., 2009
Paecilomyces lilacinus
Meloidogyne incognita (nematode) causing
root-knot in black peppers
Spraying of conidial suspension
Pau et al., 2012
Trichoderma harzianum
Fusarium proliferatum and F. verticillioides
(ascomycete) causing Fusarium ear rot in
maize
Production of volatile and
nonvolatile inhibitory
compounds
Suhaida & NurAinIzzati,
2013
Trichoderma harzianum
Ganoderma boninense (basidiomycete)
causing basal stem rot in oil palms
Production of volatile and
nonvolatile inhibitory
compounds
Siddiquee et al., 2009; Nur
Ain Izzati & Abdullah,
2008; Sundram et al.,
2008
Trichoderma harzianum
Macrophomina phaseolina (ascomycete)
causing charcoal rot disease in soybeans
Production of volatile and
nonvolatile inhibitory
compounds
Khalili et al., 2016
Trichoderma virens
Ganoderma boninense (basidiomycete)
causing basal stem rot in oil palms
Production of volatile and
nonvolatile inhibitory
compounds
Angel et al., 2016
Trichoderma sp.
Botryodiplodia theobromae (ascomycete)
causing stem-end rot in mangos
Fruit treatment (spraying) with
conidial suspension
Suhanna et al., 2013
Trichoderma spp.
Fusarium fujikuroi (ascomycete) causing
bakanae disease in rice
Production of volatile and
nonvolatile inhibitory
compounds
Ng et al., 2015
Zoophthora radicans
Plutella xylostella (diamondback moth)
whose larvae infest cabbages
Spraying of conidial suspension
Furlong et al., 1995
Biological control agent
Reference
(a) Ascomycete
(Continues)
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
TABLE 1
649
(Continued)
Targeted pest/pathogen/disease
Application/potential mechanism
of action
Clitopilus prunulus,
Grammothele fuligo,
Lentinus tigrinus,
Pycnoporus sanguineus,
and Trametes lactinea
Ganoderma boninense (basidiomycete)
causing basal stem rot in oil palms
Root treatment of oil palm
seedlings
Naidu et al., 2018
Ganoderma orbiforme,
Neonothopanus nambi, and
Schizophyllum commune
Ganoderma boninense (basidiomycete)
causing basal stem rot in oil palms
Competition for substrate and
space, and production of
nonvolatile inhibitory
compounds
Naidu et al., 2016
Schizophyllum commune
Wood-degrading fungi on rubber wood
Production of inhibitory
compounds
Teoh et al., 2017; Peng &
Don, 2013; Teoh et al.,
2012
Colletotrichum gloeosporioides
(ascomycete) causing anthracnose in
papayas
Production of hydrolytic enzymes
and antimicrobial compounds
Hamizah et al., 2013
Actinomycetes
Ganoderma boninense (basidiomycete)
causing basal stem rot in oil palms
Production of inhibitory
compounds
Shariffah-Muzaimah et al.,
2018; Nur Azura et al.,
2016; ShariffahMuzaimah et al., 2015;
Tan et al., 2002
Bacillus amyloliquefaciens
and Pseudomonas
pachastrellae
Phytophthora capsici (oomycete) and
Fusarium solani (ascomycete) infesting
black peppers
Production of extracellular
hydrolytic enzymes
Kota et al., 2015
Bacillus thuringiensis subsp.
Kurstaki
Metisa plana (bagworm moth) whose
larvae infest oil palms
Soil treatment (spraying) with
bacterial suspension
Salim et al., 2015
Bacillus spp. and
Enterobacter spp.
Fusarium solani f. sp. piperis and F.
oxysporum f. sp. piperis (ascomycetes)
causing foot rot and stem blight in black
peppers
Production of volatile and
diffusible bioactive antifungal
compounds
Edward et al., 2013
Bacillus spp., Burkholderia
spp., and Pseudomonas
spp.
Ganoderma boninense (basidiomycete)
causing basal stem rot in oil palms
As an endophyte
Ramli et al., 2016; Seung
et al., 2015
Burkholderia cepacia
Ganoderma boninense (basidiomycete)
causing basal stem rot in oil palms
Production of proteolytic enzymes
Azadeh et al., 2010
Burkholderia cepacia and
Pseudomonas aeruginosa
Colletotrichum gloeosporioides
(ascomycete) causing anthracnose in
papayas
Production of volatile and
nonvolatile inhibitory
compounds
Rahman et al., 2007
Burkholderia sp.
Phytophthora capsici (oomycete) causing
foot rot and stem blight in black peppers
Production of hydrolytic enzymes
and antimicrobial compounds
Ahmad & Ahmadu, 2017
Burkholderia sp. and
Pseudomonas sp.
Fusarium oxysporum f. sp. cubense
(ascomycete) causing Fusarium wilt in
bananas
As an endophytes which induces
host defense enzymes
Mohd Fishal et al., 2010
Enterobacter asburiae,
Enterobacter
cancerogenus, and
Enterobacter cloacae
Phytophthora capsici (oomycete) causing
foot rot and stem blight in black peppers
Production of volatile inhibitory
compounds
Toh et al., 2016
Biological control agent
Reference
(b) Basidiomycete
(c) Yeast
110 species were screened, of
which 29 species showed
antagonism
(d) Bacterium
(Continues)
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
650
TABLE 1
(Continued)
Application/potential mechanism
of action
Reference
Colletotrichum capsici (ascomycete)
causing anthracnose in chili
Seed treatment of chili
El-Mabrok et al., 2012
Pseudomonas aeruginosa
Ganoderma boninense (basidiomycete)
causing basal stem rot in oil palms
As an endophyte
Sathyapriya et al., 2012;
Bivi et al., 2010
Pseudomonas fluorescens
Fusarium oxysporum f. sp. cubense
(ascomycete) causing Fusarium wilt in
bananas
Production of inhibitory
compounds
Mohammed et al., 2011
Pseudomonas spp.
Rhizoctonia solani (basidiomycete) causing
sheath blight of rice
Soil treatment (spraying) with
bacterial suspension
Akter et al., 2016, 2014
Serratia marcescens
Fusarium oxysporum f. sp. cubense
(ascomycete) causing Fusarium wilt in
bananas
Soil treatment with inoculum
which induces host defense
enzymes
Ting et al., 2010
Streptomyces glauciniger
Phytopathogenic fungi
Production of chitinase
Awad et al., 2014
Streptomyces griseus
Fusarium oxysporum f. sp. cubense
(ascomycete) causing Fusarium wilt in
bananas
Soil treatment (spraying) with
bacterial suspension
Zacky & Ting, 2015, 2013
Streptomyces violaceusniger
Fusarium oxysporum f. sp. cubense
(ascomycete) causing Fusarium wilt in
bananas
Production of inhibitory
compounds
Getha & Vikineswary, 2002
Streptomyces spp.
Colletotrichum capsici, Colletotrichum
acutatum, and Colletotrichum
gloeosporioides (ascomycete) causing
anthracnose in chili
Soil treatment (spraying) with
bacterial suspension
Shahbazi et al., 2014, 2013
Streptomyces spp.
Pyricularia oryzae (rice blast fungus)
infesting rice
Production of inhibitory
compounds
Awla et al., 2017; Law
et al., 2017
Acerophagus papayae (wasp)
Paracoccus marginatus (papaya mealybug)
infesting papayas
As an endoparasitoid
Mastoi et al., 2018
Apanteles metesae (wasp)
Metisa plana (bagworm moth) whose
larvae infest oil palms
As a parasitoid
Salmah et al., 2012
Calycomyza lantanae and
Ophiomyia lantanae (flies)
Lantana camara (big sage), invasive weed
Larvae of flies are leaf-eaters
Ooi, 1987
Cotesia vestalis (wasp)
Plutella xylostella (diamondback moth)
whose larvae infest cabbages
As a parasitoid
Kermani et al., 2014
Cosmolestes picticeps and
Sycanus dichotomus (bugs)
Metisa plana (bagworm moth) whose
larvae infest oil palms
As predatory natural enemies
Jamian et al., 2017
Diachasmimorpha
longicaudata, Fopius
arisanus, Fopius
vandenboschi, Psyttalia
fletcheri, and Psyttalia
incisi (wasps)
Bactrocera carambolae, Bactrocera
papayae, and Bactrocera cucurbitae
(fruit flies) infesting fruits
As a parasitoid
Yaakop et al., 2015; Shariff
et al., 2014; Ibrahim
et al., 2013;
Chinajariyawong et al.,
2000
Dolichoderus thoracicus (ant)
Conopomorpha cramerella (cocoa pod
borer moth) whose larvae infest cocoa
Active and dispersive predatory
behavior of ants
Adnan et al., 2018
Dolichoderus thoracicus and
Oecophylla smaragdina
(ants)
Helopeltis theobromae (mosquito bug)
causing leaf tattering and fruit blemishes
in cocoa
Active and dispersive predatory
behavior of ants
Way & Khoo, 1991
Menochilus sexmaculatus
(ladybird beetle)
Rhopalosiphum maidis (aphid) infesting
maize
Predatory behavior of beetles
Ibrahim & Kueh, 2013
Micromus tasmaniae
(lacewings)
Aphids infesting potatoes
Plant treatment (spraying) with egg
suspension
Hussein, 1984
Biological control agent
Targeted pest/pathogen/disease
Lactic acid bacteria
(e) Insect
(Continues)
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
TABLE 1
651
(Continued)
Biological control agent
Targeted pest/pathogen/disease
Application/potential mechanism
of action
Oecophylla smaragdina
(weaver ant)
Hypsipyla robusta (moth) whose larvae
feed on timber shoots, flowers, and barks
Active and dispersive predatory
behavior of ants
Lim et al., 2008
Oecophylla smaragdina
(weaver ant)
Pteroma pendula (bagworm moth) whose
larvae infest oil palms
Active and dispersive predatory
behavior of ants
Pierre & Idris, 2013
Tamarixia radiata (wasp)
Diaphorina citri (Asian citrus psyllid)
infesting citrus fruits
As a parasitoid
Sule et al., 2014
Plutella xylostella (diamondback moth),
Spodoptera exigua (beet armyworm
moth), and Spodoptera litura (tobacco
cutworm moth or cotton leafworm moth)
whose larvae infest fruits and vegetables
Spraying of spore suspension
targeting larvae
Ghani et al., 2013; Kermani
et al., 2013; Ramli et al.,
2011
Echinochloa crus-galli (barnyard grass),
weed infesting rice paddy fields
Production of volatile inhibitory
compounds
Aslani et al., 2015
Limnocharis flava (yellow velvetleaf), weed
infesting rice paddy fields
As herbivore
Gilal et al., 2016
Baculovirus
Spodoptera litura (tobacco cutworm moth
or cotton leafworm moth) whose larvae
infest star fruits and vegetables
Spraying of viral occlusion bodies
Zabedah et al., 2010
Baculovirus
Plutella xylostella (diamondback moth)
whose larvae infest cabbages
Spraying of viral occlusion bodies
Abdul Kadir et al., 1999
Cucumber Mosaic Virus
Bemisia tabaci (silverleaf whitefly)
infesting chili
Induction of host resistance
through artificial viral
inoculation onto the plant
Saad et al., 2019
Nudivirus
Oryctes rhinoceros (rhinoceros beetle)
infesting oil palm fronds
Spraying of viral occlusion bodies
Moslim, Kamarudin,
Ghani, et al., 2011;
Ramle et al., 2005
A consortium of functional
microbiota in
microbial-enriched
compost tea
Golovinomyces cichoracearum
(ascomycete) causing powdery mildew
on melons
Spraying of melon seedlings with
the compost tea
Naidu et al., 2012
Bacillus thuringiensis
(bacteria) and Metarhizium
anisopliae (ascomycete)
Tirathaba rufivena (bunch moth) whose
larvae infest oil palms
Spraying with fungal and bacterial
suspension
Mohamad et al., 2017
Bacillus spp. (bacteria) and
Trichoderma spp.
(ascomycetes)
Ganoderma boninense (basidiomycete)
causing basal stem rot in oil palms
Production of volatile and
nonvolatile inhibitory
compounds
Angel et al., 2018;
Alexander et al., 2017
Bacillus subtilis (bacterium)
and Trichoderma spp.
(ascomycetes)
Rhizoctonia solani (basidiomycete) causing
various commercially significant plant
diseases
Soil treatment (spraying) with
fungal and bacterial suspension
Ali & Nadarajah, 2013
Cataenococcus hispidus
(mealybug) and
Dolichoderus thoracicus
(ant)
Helopeltis theobromae (mosquito bug)
causing leaf tattering and fruit blemishes
in cocoa
Active and dispersive predatory
behavior of ant and bug
Ho & Khoo, 1997
Reference
(f) Microsporidia
Nosema bombycis
(g) Shrub
Tinospora tuberculate
(h) Snail
Pomacea canaliculata and
Pomacea maculata
(i) Virus
(j) Combination
(Continues)
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
652
TABLE 1
(Continued)
Biological control agent
Targeted pest/pathogen/disease
Application/potential mechanism
of action
Eurytoma attiva (wasp) and
Metrogaleruca obscura
(beetle)
Cordia curassavica (tropical black sage or
wild sage), invasive weed
Defoliation by beetle and
seed-destruction by wasp
Simmonds, 1980
Pseudomonas aeruginosa
(bacterium)
Trichoderma harzianum
and Trichoderma virens
(ascomycetes)
Colletotrichum truncatum (ascomycete)
causing damping-off in soybeans
Seed treatment with conidial
suspension
Begum et al., 2010
Reference
Number of available publications (n)
Note. Publications were obtained based on a literature search on SCOPUS® . Search keywords: biological control, Malaysia. Biological control agents are sorted according
to types of organisms.
FIGURE 3
Distribution of targeted crop
commodities on which scientific investigations on
potential biological control agents against
phytopathogenic organisms have been conducted in
Malaysia (1980–2019)
Note. Publications were obtained based on a literature
search on SCOPUS® , as similarly listed in Table 1.
Search keywords: biological control, Malaysia
40
32
30
28
20
11
10
10
8
3
0
Cocoa
Deciduous Fruits &
trees
vegetables
Herbs &
spices
Oil palm
Rice paddy
Targeted crop commodities
Ganoderma Management (IGM), which incorporates several
elements including sanitation, biological control, chemical
control, and the use of fertilizers with beneficial trace elements. The integration of biological control in the system is
based on the understanding that low incidence of disease has
been achieved in the presence of natural competitors/predators
that keep the parasitic fungi under control (Bivi, Farhana,
& Khairulmazmi, 2010). In an effort to further strengthen
this approach, MPOB has also developed and commercialized
their biological control formulations, namely, GanoEF biofertilizer (contains endophytic Hendersonia GanoEF1 fungus;
mechanism of action: production of inhibitory bioactive compounds; Nurrashyeda et al., 2015) and EmbioTM actinoPLUS
(contains Streptomyces sp.; mechanism of action: production of inhibitory bioactive compounds; Shariffah-Muzaimah
et al., 2015).
For rice paddy, the rice blast disease caused by Pyricularia
oryzae is considered a major endemic in rice paddy planting
areas in Malaysia and across the world. Currently, the cultivation of resistant varieties and the application of fungicides
are the most commonly used methods in controlling the disease in rice paddy planting areas in Malaysia (Abed-Ashtiani
et al., 2018). However, due to the fact that both practices fail
to provide a long-term solutions for the disease control, growing amounts of research have been conducted to incorporate
biological control approach as an alternative. Recently, an
endophytic actinomycete, Streptomyces sp. strain UPMRS4,
isolated from the rhizosphere of irrigated rice paddy fields
in Malaysia, has been shown to successfully suppress the
rice blast disease through the production of inhibitory bioactive compounds, thus inducing the systemic resistance of rice
paddy against P. oryzae (Awla et al., 2017).
Figure 4 depicts the types of potential biological control
agents against phytopathogenic organisms in Malaysia, which
are dominated by bacteria, ascomycetes, and insects. The use
of bacteria as biological control agents, especially Bacillus
spp., Burkholderia spp., and Pseudomonas spp., has shown
considerable success in Malaysia (Table 1). Ubiquitous in
nature, these bacteria exist as both nonparasitic and parasitic pathogenic species; the latter as potent producers of various enzymes and antimicrobial substances that inhibit important phytopathogens while at the same time promote plant
growth by the production of volatile substances (Beneduzi,
Ambrosini, & Passaglia, 2012).
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
Number of available publications on
potential biological control agents against
phytopathogenic organisms from Malaysia (1980–2019)
Note. Publications were obtained based on a literature
search on SCOPUS® , as similarly listed in Table 1.
Search keywords: biological control, Malaysia
Number of available publications (n)
FIGURE 4
653
40
35
30
29
18
20
10
5
5
1
1
1
1
0
Types of biological control agents
Furthermore, considering that the majority of crop pests
are insects, the use of entomopathogenic fungi, especially
from the Division Ascomycota, has proven efficient on many
crop species (Strasser, Vey, & Butt, 2010). Species such
as Beauveria bassiana, Isaria fumosorosea, Metarhizium
anisopliae, Paecilomyces spp., and Trichoderma spp. have
been efficacious against beetles, moths, and termites infesting
a multitude of crop commodities in Malaysia (Table 1). The
tropical climate of Malaysia enhances the propagation and
proliferation of these entomopathogenic fungi. In lethally
parasitizing the target insect pests, or severely disabling
them, entomopathogenic ascomycetes usually initiate the
infection in the form of airborne conidia that naturally or
artificially (that is, through human intervention) land onto
the insects’ exoskeleton. Under suitable ecophysiological
conditions, these spores germinate and grow into hyphae,
thereby colonizing the insect’s cuticle. These hyphae are
capable of producing hydrolyzing enzymes, which bore a
tunnel through which the hyphae could penetrate into the
insects’ body cavity, and there proliferate further, thus killing
the host (Fernandes, Valério, Feltrin, & Van Der Sand, 2012).
Entomopathogenic fungi can grow over a wide range of
temperatures, and some strains have the appropriate ecophysiological growth parameters for use in climates such as
Malaysia (Borisade & Magan, 2015). Being environmentally
safe, the use of entomopathogenic ascomycetes draws worldwide interest for biological control of insect pests including in
Malaysia. Apart from insects, these entomopathogenic fungi
have also been shown to parasitize other phytopathogenic
ascomycetes as well as nematodes (Table 1).
For insect species that are used to control insect pests,
the biological control agents come either as insectivorous
predators or insect parasitoids. Insectivorous predators are
mainly free-living species that aggressively prey on a large
number of insects during their lifetime, thus controlling the
pest density (Eggleton & Belshaw, 1992). Given that many
major crop pests are insects, majority of the biological control agents used are insectivorous species (Table 1). The ladybird beetles (Menochilus sexmaculatus) are voracious predators of the aphids (Rhopalosiphum maidis) infesting maize.
Various predatory ant species such as Dolichoderus thoracicus have been successful in controlling the cocoa pod
borer moths (Conopomorpha cramerella) whose larvae infest
cocoa; mosquito bugs (Helopeltis theobromae) that cause leaf
tattering and fruit blemishes in cocoa; Oecophylla smaragdina that prey on bagworm moths (Pteroma pendula) whose
larvae infest oil palms; and Hypsipyla robusta whose larvae
feed on timber shoots, flowers, and barks.
For insect parasitoids, their mechanism of action is generally by laying their eggs (oviposition) on (or in) the body
of an insect host, on (or in) which their developing larvae
will feed, consequently decapitating the host (Kapranas, Tena,
& Luck, 2012). Parasitoids are almost always endopterygote insects that have complete metamorphosis stages during their lifecycle, such as parasitoid larvae and free-living
adults. Parasitoids are generally classified into endoparasitoids, which live within their host’s body, or ectoparasitoids,
which feed on their host’s body from outside (Colmenarez,
Corniani, Jahnke, Sampaio, & Vásquez, 2018). The majority of insect parasitoids that have been used in Malaysia are
from the wasp family such as Acerophagus papayae, Apanteles metesae, Cotesia vestalis, Diachasmimorpha longicaudata, Fopius arisanus, F. vandenboschi, Psyttalia incisi, P.
fletcheri, and Tamarixia radiata, which have shown considerable success in reducing the density of moth caterpillars,
bugs, fruit flies, and psyllids infesting various economically
important fruits and vegetables such as cabbages, carambolas
(star fruit), melons, oranges, and papayas (Table 1). Wasps
have been shown to exhibit both endo– and ectoparasitoid
behaviors.
654
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
Although the majority of insect parasitoids are wasps
(Hymenoptera) and flies (Diptera) (Eggleton & Belshaw,
1992), to the best of our knowledge thus far, there has been
no available record on the use of the latter as a biological
control agent in Malaysia. This could either be due to the
fact that this particular application is totally new in Malaysia,
therefore suitable for future investigation, or that ongoing trials are not yet conclusive and published.
3 BIOLOGICA L CONTROL
AGA I N ST M YCOTOX I G E N I C FU NG I
Mycotoxins are low-molecular-weight and heat stable secondary metabolites produced by microfungi, and capable
of causing diseases and death in vertebrates (humans and
animals; Bennett & Klich, 2003). Members of the genera
Aspergillus, Fusarium, and Penicillium are often regarded
as the major producers of mycotoxins with health and economic impacts. Among the major challenges in controlling
mycotoxigenic fungi and the subsequent mycotoxin contamination in crop commodities is that they are not very sensitive/susceptible to fungicides commonly used in the field
to control fungal pathogens. At present, almost 500 different mycotoxins and fungal metabolites have been identified as being produced by more than 300 microfungal
species (Nielsen & Smedsgaard, 2003). Although mycotoxins are not necessary for growth of their fungal producers,
but because mycotoxins can weaken their competitors (usually other microorganisms competing for the same substrate
on crop commodities; competitive exclusion), the fungal producers are thought to use mycotoxins as a strategy to ensure
their survival and proliferation (Hussein & Brasel, 2001). In
terms of their carcinogenicity toward humans and animals, the
IARC, which is under the auspices of the World Health Organization (WHO) of the United Nations (UN) and serves as
the authoritative source of information on causes of cancers
(IARC: https://www.iarc.fr/), has classified mycotoxins into
several groups (Ostry et al., 2017) as in Table 2.
Although the biological control against phytopathogenic
organisms has a long history in Malaysia, as mentioned earlier, the same is not entirely true for mycotoxigenic fungi. Surprisingly, the application of biological control against mycotoxigenic fungi is almost nonexistent in Malaysia with only a
handful of publications available online on the subject matter (Samsudin & Magan, 2016; Samsudin, Medina, & Magan,
2016; Samsudin, Rodriguez, Medina, & Magan, 2017). These
studies examined the use of Clonostachys rosea and Streptomyces sp. to control the growth of Fusarium verticillioides
and the contamination of maize with fumonisins. The only
other study of similar nature was published slightly earlier on
the use of the mycoparasite Trichoderma harzianum against
TABLE 2
The International Agency for Research on Cancer
(IARC) Monographs evaluations of the carcinogenic hazard of selected
mycotoxins
Mycotoxin
Group
Aflatoxins B1 , B2 , G1 , G2 , and M1
1
Citrinin
3
Cyclochlorotine
3
Deoxynivalenol
3
Fumonisin B1
2B
Fumonisin B2
2B
Fusarenone X
3
Fusarin C
2B
Kojic acid
3
Luteoskyrin
3
Nivalenol
3
Ochratoxin A
2B
Patulin
3
Penicillic acid
3
Rugulosin
3
Sterigmatocystin
2B
T-2 toxin
3
Zearalenone
3
Note. Adapted from Ostry et al. (2017). Group 1, carcinogenic to humans (sufficient evidence); Group 2A, probably carcinogenic to humans (limited evidence
of carcinogenicity in humans but sufficient evidence in experimental animals);
Group 2B, possibly carcinogenic to humans (limited evidence of carcinogenicity in humans and less than sufficient evidence in experimental animals); Group
3, not classifiable as to its carcinogenicity to humans (evidence is inadequate in
humans and inadequate or limited in experimental animals); Group 4, probably not
carcinogenic to humans (evidence suggesting lack of carcinogenicity in humans
and in experimental animals). At present, no known mycotoxin has been classified in groups 2A and 4. The complete listing of the LD50 of each mycotoxin can
be obtained from the Toxicology Data Network, National Library of Medicine,
National Institutes of Health, USA (https://toxnet.nlm.nih.gov/). LD50 = median
lethal dose/semi-lethal dose/sublethal dose, which is the dose required to kill half
the members of a tested population after a specified test duration, and is frequently
used as a general indicator of a substance’s acute toxicity.
F. proliferatum and F. verticillioides in controlling Fusarium
ear rot in maize (Suhaida & NurAinIzzati, 2013). However,
they did not specifically examine or quantify the impact on
control of any mycotoxins. Because these fungal pathogens,
under Malaysian climatic conditions, would certainly contaminate maize with fumonisins during silking, this would
have been useful additional information. It is possible that
this has not been recognized as an important research area
in Malaysia so far. However, as Malaysia does have legislations for mycotoxin contamination of some commodities
(Table 3; Malaysian Food Regulation, 1985), this could be a
major driver for practically related research for the reduction
of mycotoxins using biological control strategies in the very
near future. Table 4 lists the occurrence data of mycotoxins on
Malaysian foods and feedstuffs, from which it is apparent that
the concern is more on aflatoxins. Malaysia’s tropical climate,
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
TABLE 3
655
Maximum permitted proportion (𝜇g/kg or ppb) of mycotoxins in foods
Maximum permitted proportion (𝝁g/kg or ppb)
Food
Total
B1
M1
Aflatoxins
Groundnuts, almonds, hazelnuts, pistachios, and Brazil nuts (shelled,
for further processing)
15
Groundnuts, almonds, hazelnuts, pistachios, and Brazil nuts (shelled,
ready-to-eat)
10
Cereal-based food for infants and children
0.1
Milk
0.5
Infant formula and follow-up formula (ready-to-drink)
Others
0.025
5
Ochratoxin A
Cereal-based food for infants and children
0.5
Coffee or ground coffee or coffee powder
5
Instant coffee or soluble coffee and decaffeinated coffee
10
Patulin
Apple juice (includes apple juices as ingredients in other beverages)
50
Note. Adapted from Malaysian Food Regulations (1985).
which is favorable for Aspergillus spp. proliferation and the
subsequent mycotoxin production, poses a constant threat to
its agriculture sector in producing safe and quality harvest. A
more comprehensive review on mycotoxin contamination of
Malaysian food and agricultural produce has been published
elsewhere (Afsah-Hejri, Jinap, Hajeb, Radu, & Shakibazadeh,
2013). Given the fact that peanuts and maize are the two most
contaminated crop commodities by members of Aspergillus
section Flavi (Pitt & Hocking, 2009; Samson, Houbraken,
Thrane, Frisvad, & Andersen, 2010), which almost invariably
produce the Group 1 carcinogenic aflatoxins, and that these
two are relevant in Malaysian agricultural sector (listed as
cash crops; Figure 2), further investigation on the development of an efficient control against aflatoxigenic fungal colonization on these crops is highly warranted. Similar threat on
peanuts and maize is also observed in the Philippines (Balendres, Karlovsky, & Cumagun, 2019), Ghana (Agbetiameh
et al., 2018), and Zambia (Kachapulula, Akello, Bandyopadhyay, & Cotty, 2017).
As described in Table 1, several biological control
agents have been investigated on their effects against phytopathogenic Fusarium spp. More detailed examination shows
that some of these Fusarium spp. are in fact also mycotoxigenic (for example, F. proliferatum: beauvericins, fumonisins, and moniliformin; F. solani: moniliformin and trichothecenes; F. verticillioides: fumonisins, fusaric acid,
and moniliformin) according to Desjardins (2006). Therefore, opportunities do exist for replicating such studies
with biological control agents and investigate their effects
in controlling mycotoxin contamination. In addition, as
most studies have focused on the use of effective biological control agents against plant diseases, it may be ben-
eficial to also screen these for mycotoxin control (Medina, Mohale, et al., 2017). Nevertheless, previous studies have also suggested that several potential bacterial
antagonists may, under certain abiotic conditions, stimulate mycotoxin production instead of inhibiting it (Al-Saad,
Al-Badran, Al-Jumayli, Magan, & Rodríguez, 2016). Thus,
care is needed when screening for mycotoxin control. There
are also some cases in which the fungal pathogens could “disarm” the applied antagonist. For example, it was shown that
deoxynivalenol-producing F. culmorum and F. graminearum
strains could repress the expression of genes that regulate the
chitinase enzyme production in the biological control agent
Trichoderma atroviride (Lutz, Feichtinger, Défago, & Duffy,
2003). This is not unusual because pathogens also possess
diverse responses to counteract antagonists, which include
detoxification and active efflux of antibiotics, and repression
of biosynthetic genes involved in biological control (Duffy,
Schouten, & Raaijmakers, 2003).
In other parts of the world, however, the application of biological control agents to combat mycotoxigenic fungi is more
widely practiced. Among the earliest and excellent reviews
that discussed the potential use of nontoxigenic strains of
fungi, yeasts, and bacteria in controlling mycotoxigenic fungi
was published by Cleveland, Dowd, Desjardins, Bhatnagar,
and Cotty (2003). The review also discussed the indirect controls of mycotoxigenic fungi by controlling their vectoring
insects or developing insect-resistance plant cultivars (e.g.,
Bt maize) because insect damage provides entry points for
mycotoxigenic fungi to colonize the crop, thus resulting in
increased mycotoxin contamination. Recently, a review on
the dynamics and mechanisms of action of biological control
agents against mycotoxigenic fungi was critically discussed
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
656
TABLE 4
Occurrence of mycotoxins on Malaysian food and feed
Food/Feed (number of sample, n)
Mycotoxin
n positive, n above limit
Reference
Spices and spice-based products
(n = 90)
Aflatoxins and ochratoxin A
AFs
n positive: 19/90
n above limit: 19/90
OTA
n positive: 37/90
n above limit: 25/90
Ahmad-Zaidi et al., 2020
Commercial food and beverage
(n = 120); apple, grape, orange, and
pomegranate juices; wheat and
barley flour; dried figs, raisins, chili
powder, and spices; nonroasted
peanut; roasted pistachio
Aflatoxins and ochratoxin A
AFs
n positive: 19/120
n above limit: 14/120
OTA
n positive: 3/120
n above limit: None
Alsharif et al., 2019
Raw peanuts (n = 87) and peanut-based
products (n = 91)
Aflatoxins
Raw peanuts
n positive: 36/87
n above limit: 20/87
Peanut-based products
n positive: 50/91
n above limit: 9/91
Norlia et al., 2018
Milk and dairy products (n = 53)
Aflatoxin M1
n positive: 19/53
n above limit: 4/53
Nadira et al., 2017
Cow’s, goat’s, and human’s milk
(n = 33)
Aflatoxin M1
n positive: 2/33
n above limit: None
Shuib et al., 2017a
Cow’s milk (n = 102)
Aflatoxin M1
n positive: 4/102
n above limit: 3/102
Shuib et al., 2017b
Commercial vegetable oil (n = 25)
Aflatoxins, ochratoxin A,
deoxynivalenol, and
zearalenone
AFs
n positive: None
n above limit: None
OTA
n positive: None
n above limit: None
DON
n positive: None
n above limit: None
ZEN
n positive: 15/25
n above limit: None
Sharmili et al., 2016
Commercial spice (n = 58)
Aflatoxins and ochratoxin A
AFs
n positive: 50/58
n above limit: 15/58
OTA
n positive: 27/34
n above limit: 1/34
Ali et al., 2015
Red yeast rice (traditional Chinese
medicine; n = 50)
Aflatoxins, ochratoxin A, and
citrinin
AFs
n positive: 46/50
n above limit: 35/50
OTA
n positive: 50/50
n above limit: None
CIT
n positive: 50/50
n above limit: 50/50
Samsudin and Abdullah,
2013
Commercial dried chili (n = 80)
Aflatoxins and ochratoxin A
AFs
n positive: 52/80
n above limit: 9/80
OTA
n positive: 65/80
n above limit: 13/80
Jalili and Jinap, 2012
(Continues)
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
TABLE 4
657
(Continued)
Food/Feed (number of sample, n)
Mycotoxin
n positive, n above limit
Reference
Commercial rice (n = 5), peanut (n =
9), and chili (n = 10)
Aflatoxins
Rice
n positive: 4/5
n above limit: 3/5
Peanut
n positive: 4/9
n above limit: 2/9
Chili
n positive: 9/10
n above limit: 3/10
Khayoon et al., 2012
Commercial coffee and cereal (n = 45)
Ochratoxin A
Commercial cereal (n = 100)
Aflatoxins B1 , B2 , G1 , and G2 ,
ochratoxin A, zearalenone,
deoxynivalenol, and
fumonisins B1 , B2 , T-2, and
HT-2
AFs
n positive: 60/100
n above limit: 2/100
OTA
n positive: 40/100
n above limit: 2/100
ZEN
n positive: 25/100
n above limit: None
DON
n positive: 36/100
n above limit: None
FUM
n positive: 19/100
n above limit: None
T-2
n positive: 16/100
n above limit: None
HT-2
n positive: 16/100
n above limit: None
Soleimany, Jinap, & Abas,
2012
Commercial cereal (n = 80)
Aflatoxins B1 , B2 , G1 , and G2 ,
ochratoxin A, zearalenone,
deoxynivalenol, and
fumonisins B1 , B2 , T-2, and
HT-2
AFs
n positive: 40/80
n above limit: 2/80
OTA
n positive: 24/80
n above limit: 1/80
ZEN
n positive: 15/80
n above limit: None
DON
n positive: 24/80
n above limit: None
FUM
n positive: 13/80
n above limit: None
T-2
n positive: 11/80
n above limit: None
HT-2
n positive: 9/80
n above limit: None
Soleimany, Jinap, Faridah, &
Khatib, 2012
Commercial food products (n = 95)
Aflatoxin B1
Grain corn for animal feed (n = 80)
Aflatoxin B1 and fumonisins
n positive: 25/45
n above limit: 1/45
n positive: 69/95
n above limit: None
AFB1
n positive: 65/80
n above limit: 18/80
FUM
n positive: 80/80
n above limit: None
Lee et al., 2012
Reddy et al., 2011
Reddy & Salleh, 2011
(Continues)
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
658
TABLE 4
(Continued)
Food/Feed (number of sample, n)
Mycotoxin
n positive, n above limit
Commercial food and feed (n = 39)
Fumonisins
n positive: 5/39
n above limit: None
Reference
Khayoon, Saad, Salleh, et al.,
2010
Animal feed (n = 42)
Aflatoxins
n positive: 8/42
n above limit: 3/42
Khayoon, Saad, Yan, et al.,
2010
Commercial wheat (n = 15) and barley
(n = 15)
Aflatoxin B1
Wheat
n positive: 3/15
n above limit: None
Barley
n positive: 1/15
n above limit: None
Reddy & Salleh, 2010
Commercial cereal (n = 60)
Aflatoxins, ochratoxin A, and
zearalenone
AFs
n positive: 24/60
n above limit: 1/42
OTA
n positive: 9/60
n above limit: 2/42
ZEN
n positive: 11/60
n above limit: None
Rahmani et al., 2010
Commercial noodle (n = 135)
Deoxynivalenol
n positive: 110/135
n above limit: None
Moazami & Jinap, 2009
Raw shelled peanut (n = 145)
Aflatoxins
n positive: 73/145
n above limit: 33/145
Sulaiman et al., 2007
Abbreviations: AFs, aflatoxins; CIT, citrinin; DON, deoxynivalenol; FUM, fumonisin; HT-2, HT-2 toxin; OTA, ochratoxin A; T-2, T-2 toxin; ZEN, zearalenone.
by Medina, Mohale, et al. (2017). They suggested that the
mechanism of action and the inoculum dose required for effective control of mycotoxigenic fungi may be different from that
for phytopathogenic fungi. Therefore, economical production/formulation is critical for successful biological control of
mycotoxins. Nevertheless, they concur that the primary mechanisms of action for the control of mycotoxigenic fungi or phytopathogenic organisms usually include niche/habitat exclusion, competition for nutrients, and production of inhibitory
volatiles. In fact, Köhl, Kolnarr, and Ravensberg (2019) have
suggested that biological control agents utilize a cascade of
different interacting approaches for efficacy. Based on the
available literature, we could summarize the biological control agents into three major groups: (a) nontoxigenic strains of
known mycotoxin producers, (b) mycoparasitic microfungi,
and (c) phyllosphere or soilborne bacteria.
The use of nontoxigenic Aspergillus flavus and A. parasiticus strains to control their toxigenic counterparts began in the
early 1990s in the United States (Brown, Cotty, & Cleveland,
1991). Since then, this application has found success in
other parts of the world where aflatoxin contamination is
significant and has had significant impacts on the economies,
such as Kenya (Marchera & Ndwiga, 2015), Italy (Mauro,
Garcia-Cela, Pietri, Cotty, & Battilani, 2018), Argentina
(Alaniz Zanon, Clemente, & Chulze, 2018), and Thailand
(Tran-Dinh, Pitt, & Markwell, 2018). Its modes of action are
either through competitive exclusion (that is, toxigenic strain
displacement) (Damann, 2015) or through thigmoregulation
(that is, touch inhibition) (Huang, Jha, Sweany, DeRobertis,
& Damann, 2011). However, in securing an efficient biological control agent, it should be noted that lack of mycotoxin
biosynthesis because of the deletion of key biosynthetic gene
clusters may not be the only criterion, rather the nontoxigenic
candidate must also be an effective colonizer of the crop
commodity onto which it would be applied (to competitively
exclude its competitors), and that it must also be able to
reduce the mycotoxin contamination (Horn & Dorner, 2011).
Recent investigation proposed yet another mechanism for the
antagonism of the nontoxigenic strains, which is via active
extrolites (that is, uncharacterized compounds) secretion
(Moore, Lebar, & Carter-Wientjes, 2019).
Another successful area for research and applications
is the use of mycoparasitic microfungi. As described in
Table 1, Trichoderma spp. feature predominantly as a competent biological control agent against a wide variety of
phytopathogenic organisms. Similar traits are also exhibited
against mycotoxigenic fungi and subsequent mycotoxin production (Braun et al., 2018; Saravanakumar et al., 2018; Veenstra, Rafudeen, & Murray, 2019). Prevalently found in the
rhizo- and phyllosphere, the free-living and fast-growing Trichoderma spp. often exist in mutualistic endophytic relationships with plants. As a biological control agent, Trichoderma spp. demonstrate antagonism through antibiotic production, parasitism (for example, penetration and killing),
inducing host-plant resistance (that is, Trichoderma spp. are
also known to have plant growth promoting characteristics), and habitat/nutrient competition (that is, Trichoderma
spp. are effective decomposers and aggressive colonizers,
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
thus leaving scarce macro- and micronutrients from the soil
for other competitors). Trichoderma spp. also produce a wide
array of enzymes, chief among which is the fungal-cell-walldegrading chitinase (Harman, 2006). The ability of Trichoderma spp. to produce chemically diverse secondary metabolites that could modify the environmental conditions into that
which is inhospitable for their competitors has also been
extensively reviewed by Keswani, Mishra, Sarma, Singh, and
Singh (2014) and Reino, Guerrero, Hernández-Galán, and
Collado (2008).
Finally is the use of soilborne bacteria that produce various antibiotics and fungal-cell-wall-degrading enzymes. As in
the control of phytopathogenic organisms, Bacillus spp. also
exhibit potency and prowess in the control of mycotoxigenic
fungi. This is mainly attributed to the production of cyclic
lipopeptides that display amphiphilic properties that could
disrupt the fungal cell wall and cell membrane (Siahmoshteh
et al., 2017). Other chemical metabolites produced by Bacillus spp. could also inhibit fungal nutrient acquisition, mycelial
growth, and conidial germination (Cao et al., 2012; Li et al.,
2009; Volpon, Besson, & Lancelin, 2000). Recent investigation also elucidates the ability of enzymes produced by
Bacillus spp. in degrading mycotoxins (Afsharmanesh, PerezGarcia, Zeriouh, Ahmadzadeh, & Romero, 2018). Besides
Bacillus spp., lactic acid bacteria have also been shown to
possess antimycotoxigenic properties, including the production of organic acids, which will acidify environmental pH,
thus inhibiting fungal growth and mycotoxin production;
antifungal compounds (for example, propionate and cyclic
dipeptide); and competitive exclusion of fungal pathogens
(Guimarães, Santiago, Teixeira, Venâncio, & Abrunhosa,
2018; Oliveira, Zannini, & Arendt, 2014). The efficiency
of Streptomyces spp. in combatting mycotoxigenic fungi is
also of note. The production of various bioactive molecules
such as antibiotics (e.g., candicidin, phosphlactomycin, tubercidin, and pyrrole-2-carboxylic acid), lytic enzymes, and
volatile organic compounds (e.g., phenylethyl alcohol and
(+)-epi-bicyclesesquiphellandrene) has greatly contributed to
the antagonism (Hoster, Schmitz, & Daniel, 2005; Mari,
Bautista-Baños, & Sivakumar, 2016; Nguyen et al., 2018).
The growth inhibition of mycotoxigenic fungi and the subsequent mycotoxin production by Streptomyces spp. in wheat
(Nourozian, Etebarian, & Khodakaramian, 2006; Palazzini,
Ramirez, Torres, & Chulze, 2007; Palazzini, Yerkovich, Alberione, Chiotta, & Chulze, 2017) and in peanuts (Sultan &
Magan, 2011) have been demonstrated.
4 EMERGING CHALLENGES I N
M YCOTOX I N M A NAGE M E N T
At present, the world is threatened by climate change and the
potential dangers it brings. Climate change is an alteration
659
of the average weather distributions over prolonged period
of time (that is, decades to centuries), which is caused by
several factors such as biotic processes, solar radiation, and
volcanic eruptions. The worldwide increase of atmospheric
carbon dioxide (CO2 ; second-most abundant greenhouse gas)
and consequently the rise of temperature (that is, global warming) constitute the major manifestations of climate change.
The average temperature of the lower troposphere (that is,
lowest layer of Earth’s atmosphere) has increased between
0.15 and 0.25 ◦ C per decade since 1980 according to satellite temperature measurements, whereas the atmospheric concentration of CO2 has increased from 280 ppm in 1750 to
400 ppm in 2015 (ESRL, 2019). What is more alarming is that
the increment trends of both parameters have been accelerating decade by decade, and are actually made worse by human
activities. For instance, CO2 has approximately increased
from 280 ppm in 1750 (beginning of Industrial Revolution) to
330 ppm in 1970, which saw an increase of 50 ppm in around
220 years. However, the next 50 ppm steadily rose within just
30 years to 380 ppm (ca. 1970 to 2000), and the next 20 ppm
in 15 years (ca. 2000 to 2015) to the present concentration
of 411 ppm (ESRL, 2019). Worldwide, as a result of climate
change, humans will face substantial threats in terms of health,
food security due to decreasing crop yields, and the desertification of populated areas due to rising sea levels (Battisti &
Naylor, 2009). Furthermore, there has also been an increasing
concern that climate change permits for the increased propagation of crop pests and pathogens and their movement to
other previously unsuitable regions (Bebber, Ramotowski, &
Gurr, 2013) due to the alteration in the natural environments,
which creates new opportunities for evolution (Fisher et al.,
2012). The impacts of climate change on the propagation of
microfungi, especially that of the mycotoxigenic fungi and
the subsequent mycotoxin production, have been previously
discussed in depth (Botana & Sainz, 2015; Ksenija, 2018;
Medina, Akbar, Baazeem, Rodriguez, & Magan, 2017, 2015;
Paterson & Lima, 2011, 2010).
As if the threats of climate change are not severe enough,
we are also burdened by the recently discovered “masked
mycotoxins.” Masked mycotoxins are biologically modified
mycotoxins that occur as a result of plant defense mechanism against xenobiotic compounds that alters the chemical
structure of the mycotoxins through conjugation with sugars,
amino acids, or sulfate groups, and compartmentalize them
in plant cell vacuoles or conjugated to biopolymers such as
cell wall components. These conjugated mycotoxins are nontoxic. However, they could be converted back into their parent form by hydrolysis during food and feed processing or in
the digestive tract of humans and animals (Berthiller, Schuhmacher, Adam, & Krska, 2009a; 2016; Galaverna, Dallsta,
Mangia, Dossena, & Marchelli, 2009). The issue of masked
mycotoxins began attracting scientific interest after several
mysterious cases of mycotoxicoses during the mid-1980s,
660
BIOLOGICAL CONTROL OF PHYTOPATHOGENIC ORGANISMS AND MYCOTOXIGENIC FUNGI…
in which symptoms in severely affected animals did not
correlate with the low mycotoxin content detected in their
feed (Berthiller et al., 2009b; 2016). Furthermore, masked
mycotoxins generally elude the established quantification
analyses (for example, HPLC), thus leading to an underestimation of their exposure (hence the term “masked”),
and masked mycotoxin standards, reference materials, and
interlaboratory-validated quantification methods are not yet
commercially/widely available. The terms “masked,” “hidden,” “conjugated” (covalently linked), and “bound” (noncovalently linked) are frequently used in the literature, with
“masked” being the most popular (Berthiller et al., 2009a).
More recently, a new term, “modified mycotoxin,” has been
proposed that encompasses other possible forms of mycotoxins and their modifications including masked mycotoxins in
the effort “to harmonize future scientific wording and subsequent legislation” (Rychlik et al., 2014).
The looming threats of climate change and its effects on
the proliferation of mycotoxigenic fungi and the subsequent
contamination of staple food and feed chains with mycotoxins, and the emergence of masked mycotoxins are seen as
new global challenges that further impact on the management
strategies for mycotoxins.
5 CONC LU SI O N S A N D T H E WAY
FORWA R D
As part of a good IPM, biological control of phytopathogenic
organisms has been widely applied in Malaysia with all the
four main biological control strategies (that is, natural, importation, augmentation, and conservation) have been documented. The role of natural enemies in controlling native pests
has been recognized in economically important crops especially oil palm, cocoa, coconut, and rice. However, the same
is not entirely true for mycotoxigenic fungi, against which
the application of biological control is almost nonexistent.
Based on the severely limited data, we conclude that this could
either be due to the fact that (a) this particular application
is totally new in Malaysia and is not yet recognized as an
important research area, (b) ongoing trials are not yet conclusive and published, or (c) the safety consideration and risk
analysis on whether or not to introduce biological control in
Malaysian agro-ecosystem is taking longer than anticipated.
This is rather perplexing because (a) Malaysian tropical climate is conducive for fungal proliferation including that of
the mycotoxigenic fungi, (b) reports on mycotoxin contamination of Malaysian foods and crop commodities are abound, (c)
Malaysia does have legislations for mycotoxin contamination,
(d) in other parts of the world, the application of biological
control agents to combat mycotoxigenic fungi is more widely
practiced and accepted, and (e) the application of biological
control agents against plant diseases has long and successful
history in Malaysia.
To fully utilize the abundant potentials of biological control
approaches against mycotoxigenic fungi in the effort to minimize the impact and exposure of humans and animals to these
toxic compounds, the followings are henceforth suggested:
1. Further and deeper investigation on the development and
application of biological control against mycotoxigenic
fungi and mycotoxin contamination using indigenous isolates;
2. As most studies have focused on the use of effective biological control agents against plant diseases, it may be beneficial to also screen these for mycotoxin control;
3. Since fungal growth and mycotoxin production are not
always parallel, care and consideration when selecting and
developing a biological control agent should be taken to
avoid mycotoxin stimulation (instead of mycotoxin inhibition).
ACKNOW LEDGMENTS
The authors would like to acknowledge the financial support received from the Malaysian Ministry of Education
(MOE) under the High Impact Centre of Excellence (HICoE)
grant scheme (HICoE/ITAFoS/2017/FS9). The first author
also thanks the School of Graduate Studies, Universiti
Putra Malaysia for her PhD studentship under the Graduate
Research Fund (GRF) scheme 2017–2020.
CO N F L I C T O F I N T E R E ST
The authors declare no conflict of interest.
AU T H O R CO N T R I B U T I O N S
S. N. E. Yazid was involved in drafting the entire work.
S. Jinap, N. Magan, and N. I. P. Samsudin were involved
in critically revising the “mycotoxigenic fungi” contents.
S. I. Ismail was involved in critically revising the “phytopathogenic organisms” contents.
O RC I D
https://orcid.org/0000-0002-8369-9536
Selamat Jinap
Naresh Magan
https://orcid.org/0000-0002-5002-3564
Nik Iskandar Putra Samsudin
https://orcid.org/0000-0002-2756-0142
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