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The phylogenetic position of Tuber glabrum sp. nov. and T. sinomonosporum nom. nov., two Paradoxa-like truffle species from China

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Abstract

Based on morphological and molecular phylogenetic analysis, the new species Tuber glabrum is described from China, and the new name T. sinomonosporum is proposed for Paradoxa sinensis. Tuber glabrum is similar to T. gigantosporum but differs by its glabrous ascomata. The ITS sequences of the two Paradoxa-like truffle species, which invariably have one-spored asci, fall into the lineage of Tuber and cluster in a distinct clade together with the European T. macrosporum and the North American T. canaliculatum.

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Reference

  • Bonito GM, Gryganskyi AP, Trappe JM, Vilgalys R (2010a) A global meta-analysis of Tuber ITS rDNA sequences: species diversity, host associations and long-distance dispersal. Mol Ecol 19:4994–5008. doi:10.1111/j.1365-294X.2010.04855.x

    Article  CAS  Google Scholar 

  • Bonito G, Trappe JM, Rawlinson P, Vilgalys R (2010b) Improved resolution of major clades within Tuber and taxonomy of species within the Tuber gibbosum complex. Mycologia 102:1042–1057. doi:10.3852/09-213

    Article  Google Scholar 

  • Bonito G, Trappe JM, Donovan S, Vilgalys R (2011) The Asian black truffle Tuber indicum can form ectomycorrhizas with North American host plants and complete its life cycle in non-native soils. Fungal Ecol 4:83–93. doi:10.1016/j.funeco.2010.08.003

    Article  Google Scholar 

  • Bonito G, Smith ME, Nowak M, Healy RA, Guevara G, Cazares E, Kinoshita A, Nouhra ER, Dominguez LS, Tedersoo L, Murat C, Wang Y, Moreno BA, Pfister DH, Nara K, Zambonelli A, Trappe JM, Vilgalys R (2013) Historical biogeography and diversification of truffles in the tuberaceae and their newly identified southern hemisphere sister lineage. PLoS ONE 8(1):E52765. doi:10.1371/journal.pone.0052765

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Brock PM, Doring H, Bidartondo MI (2009) How to know unknown fungi: the role of a herbarium. New Phytol 181:719–724. doi:10.1111/j.1469-8137.2008.02703.x

    Article  PubMed  Google Scholar 

  • Dring DM (1971) Techniques for microscopic preparation. In: Booth C (ed) Methods in microbiology, vol 4. . Academic, New York, p 98

    Google Scholar 

  • Fan L, Cao JZ (2012) Two new species of white truffle from China. Mycotaxon 121:297–305. doi:10.5248/121.297

    Article  Google Scholar 

  • Fan L, Cao JZ, Li Y (2012) Tuber microsphaerosporum and Paradoxa sinensis spp. nov. Mycotaxon 120:471–475. doi:10.5248/120.471

    Article  Google Scholar 

  • Fan L, Cao JZ, Li Y (2013) A reassessment of excavated Tuber species from China based on morphology and ITS rDNA sequence data. Mycotaxon (in press)

  • Ferdman Y, Aviram S, Roth-Bejerano N, Trappe JM, Kagan-Zur V (2005) Phylogenetic studies of Terfezia pfeilii and Choiromyces echinulatus (Pezizales) support new genera for southern African truffles: Kalaharituber and Eremiomyces. Mycol Res 109:237–245. doi:10.1017/S0953756204001789

    Article  CAS  PubMed  Google Scholar 

  • Frank JL, Southworth D, Trappe JM (2006) NATS truffle and truffle-like fungi 13: Tuber quercicola and T. whetstonense, new species from Oregon, and T. candidum redescribed. Mycotaxon 95:229–240

    Google Scholar 

  • Gilkey HM (1954) Tuberales. N Am Fl Ser II 1:1–36

    Google Scholar 

  • Huelsenbeck JP, Ronquist F, Nielsen R, Bollback JP (2001) Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294:2310–2314. doi:10.1126/science.1065889

    Article  CAS  PubMed  Google Scholar 

  • Iotti M, Amicucci A, Stocchi V, Zambonelli A (2002) Morphological and molecular characterization of mycelia of some Tuber species in pure culture. New Phytol 155:499–505. doi:10.1046/j.1469-8137.2002.00486.x

    Article  Google Scholar 

  • Kinoshita A, Sasaki H, Nara K (2011) Phylogeny and diversity of Japanese truffles (Tuber spp.) inferred from sequences of four nuclear loci. Mycologia 103:779–794. doi:10.3852/10-138

    Article  PubMed  Google Scholar 

  • Moreno G, Alvarado P, Manjon JL (2012) Phylogenetic affiliation of Choiromyces magnusii and C. venosus Tuberaceae (Ascomycota) from Spain. Mycol Prog 11:463–471. doi:10.1007/s11557-011-0762-1

    Article  Google Scholar 

  • Rambaut A (2000) Estimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies. Bioinformatics 16:395–399. doi:10.1093/bioinformatics/16.4.395

    Article  CAS  PubMed  Google Scholar 

  • Riousset L, Riousset G, Chevalier G, Bardet MC (2001) Truffes d’Europe et de Chine. Institut National de la Recherche Agronomique, Paris

    Google Scholar 

  • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574. doi:10.1093/bioinformatics/btg180

    Article  CAS  PubMed  Google Scholar 

  • Roux C, Sejalon-Delmas N, Martins M, Parguey-Leduc A, Dargent R, Becard G (1999) Phylogenetic relationships between European and Chinese truffles based on parsimony and distance analysis of ITS sequences. FEMS Microbiol Lett 180:147–155. doi:10.1111/j.1574-6968.1999.tb08789.x

    Article  CAS  PubMed  Google Scholar 

  • Swofford DL (2002) PAUP*, phylogenetic analysis using parsimony (*and other methods), version 4. Sinauer, Sunderland

    Google Scholar 

  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTALX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl Acids Res 24:4876–4882. doi:10.1093/nar/25.24.4876

    Article  Google Scholar 

  • Wang Y, Hu HT (2008) Paradoxa gigantospora comb. nov. from China. Mycotaxon 106:199–202

    Google Scholar 

  • Wang Y, Li ZP (1991) A new species of Tuber from China. Acta Mycol Sin 10:263–265 (In Chinese)

    Google Scholar 

  • Wang YJ, Tan ZM, Zhang DC, Murat C, Jeandroz S, Le Tacon F (2006) Phylogenetic relationships between Tuber pseudoexcavatum, a Chinese truffle, and other Tuber species based on parsimony and distance analysis of four different gene sequences. Microbiol Lett 281:259–269. doi:10.1111/j.1574-6968.2006.00283.x

    Google Scholar 

  • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA et al (eds) PCR Protocols: a Guide to Methods and Applications. Academic, San Diego, pp 315–322

    Google Scholar 

  • Vizzini A (2003) Il genere Tuber: la sua posizione nelle Pezizales (origine dei taxa ipogei nelle Pezizales). Boll Gruppo Micol G. Bresadola 46 (n.s.): 97–153

    Google Scholar 

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Acknowledgments

The study was supported by the National Natural Science Foundation of China (No. 31270058) and the Beijing Natural Science Foundation (No. 5122003).

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Correspondence to Li Fan.

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Fan, L., Feng, S. & Cao, JZ. The phylogenetic position of Tuber glabrum sp. nov. and T. sinomonosporum nom. nov., two Paradoxa-like truffle species from China. Mycol Progress 13, 241–246 (2014). https://doi.org/10.1007/s11557-013-0908-4

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  • DOI: https://doi.org/10.1007/s11557-013-0908-4

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