Abstract
Inaequalispora and Parvothecium are two myrothecium-like, closely related genera of Hypocreales. They are also morphologically similar, sharing sporodochial conidiomata, penicillate conidiophores, fusiform to ellipsoidal conidia accumulating in a green slimy drop, and hypha-like setoid extensions emerging through the conidial mass. During a revision of myrothecium-like isolates originating from rainforest areas of South America (Ecuador, Brazil) and Southeast Asia (Singapore), multilocus phylogenetic inferences (based on DNA sequence data of ITS, partial nuc 28S, and partial tef1a, rpb2 and tub2) and morphological studies concordantly revealed the occurrence of two undescribed species of Inaequalispora (I. longiseta sp. nov. and I. cylindrospora sp. nov.) and one undescribed species of Parvothecium (P. amazonensesp. nov.). Myrothecium setiramosum, M. dimorphum, and two undescribed taxa form the base of a new lineage, sister to the current Parvothecium lineage. This lineage is recognized as Digitiseta gen. nov., typified by D. setiramosa comb. nov. Digitiseta dimorpha comb. nov. is also proposed, and the new species D. parvodigitata sp. nov. and D. multidigitata sp. nov. are described.
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Notes
Digitiseta dimorpha (Ts. Watan.) Decock & Gordillo, comb. nov. (MB820832; basionym: Myrothecium dimorphum Ts. Watan.,Mycoscience 44: 284 (2003), MB489474).
References
Ahrazem O, Begoña Gómez M, Prieto A, Bernabé M, Leal JA (2000) Heterogeneity of the genus Myrothecium as revealed by cell wall polysaccharides. Arch Microbiol 173:296–302
Becerra-Hernández CI, González D, De Luna E, Mena-Portales J (2016) First report of pleoanamorphy inGyrothrix verticicladawith an Idriella-like synanamorph. Cryptog Mycol 37:241–252. doi:10.7872/crym/v37.iss2.2016.241
Castañeda RF (1986) Deuteromycotina de Cuba. Hyphomycetes IV. Seria Taxonómica de INIFAT. 1–17
Chen Y, Ran SF, Dai DQ, Wang Y, Hyde KD, Wu YM, Jiang Y (2016) Mycosphere essays 2. Myrothecium. Mycosphere 7:64–80. doi:10.5943/mycosphere/7/1/7
Decock C, Huret S, Bivort C (2008) Anamorphic fungi from French Guyana: Septomyrothecium maraitiense sp. nov. and S. setiramosum comb. nov. (anamorphic Hypocreales, Ascomycota). Cryptog Mycol 29:321–331
Glass L, Donaldson GC (1995) Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl Envir Microbiol 61:1323–1330
Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30:772–780. doi:10.1093/molbev/mst010
Kornerup A, Wanscher JH (1978) Methuen handbook of colours (3rd edn). Methuen, London
Lanfear R (2012) PartitionFinder v.1.1.0 and PartitionFinderProtein v1.1.0. doi:10.1093/bioinformatics/btu033
Liu YJ, Whelen S, Hall BD (1999) Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Mol Biol Evol 16:1799–1808
Lombard L, Zhou XD, Crous PW, Wingfield BD, Wingfield MJ (2010) Calonectria species associated with cutting rot of eucalyptus. Persoonia 24:1–11. doi:10.3767/003158510X486568
Lombard L, Houbraken J, Decock C, Samson RA, Meijer M, Réblová M, Crous PW (2016) Generic hyper-diversity in Stachybotriaceae. Persoonia 36:156–246. doi:10.3767/003158516X691582
Matsushima T (1971) Some interesting fungi imperfecti. Bull Natn Sci Mus 14:460–480
Müller J, Müller KF, Neinhuis C, Quandt D (2006) PhyDE - Phylogenetic Data Editor. Www.Phyde.De
Nag Raj TR (1993) Coelomycetous anamorph with appendage-bearing conidia. Mycologue Publications, Waterloo
Nag Raj TR (1995a) Lomachashaka revisited. Mycotaxon 53:311–324
Nag Raj TR (1995b) What is Myrothecium prestonii? Mycotaxon 53:295–310
Nirenberg HI (1981) A simplified method for identifying Fusarium spp. occurring on wheat. Can J Bot 59:1599–1609
Rambaut A, Drummond A (2007) Tracer1.4. Retrieved from http://beast.bio.ed.ac.uk/Tracer
Rehner S, Buckley E (2005) A Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences : evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97:84–98
Rehner S, Samuels GJ (1994) Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences. Mycol Res 98:625–634. doi:10.1016/S0953-7562(09)80409-7
Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574. doi:10.1093/bioinformatics/btg180
Samuels GJ, Rossman AY (1979) Conidia and classification of the nectrioid fungi. In: Kendrick B (ed) The whole fungus. National Museum of Natural Sciences, Ottawa, pp 167–179
Schroers H, Samuels GJ, Gams W (1999) Stephanonectria, a new genus of the Hypocreales (Bionectriaceae) and its sporodochial anamorph. Sydowia 51:114–126
Seifert K, Louis-Seize G, Sampson G (2003) Myrothecium acadiense, a new hyphomycete isolated from the weed Tussilago farfara. Mycotaxon 87:317–327
Simmons MP, Pickett KM, Miya M (2004) How meaningful are Bayesian support values? Mol Biol Evol 21(1):188–199. doi:10.1093/molbev/msh014
Stamatakis A (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312–1313. doi:10.1093/bioinformatics/btu033
Sung GH, Sung JM, Hywel-Jones NL, Spatafora JW (2007) A multi-gene phylogeny of Clavicipitaceae (Ascomycota, fungi): identification of localized incongruence using a combinational bootstrap approach. Mol Phylog Evol 44:1204–1223. doi:10.1016/j.ympev.2007.03.011
Swofford DL (2003) PAUP*. Phylogenetic analysis using parsimony (*and other methods), Computer programme. Sinauer, Sunderland
Tulloch M (1972) The genus Myrothecium Tode ex FR. Mycol Pap 130:1–42
Untereiner WA, Bonjean B, Decock C, Evrard P, De Frahan MH, Jamin N, De Brabardere J (1998) MUCL catalogue of strains (fungi-yeast), 3rd edn. Belgian Office for Scientific, Technical and Cultural Affairs, Brussels
Vilgalys R, Hester M (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bact 172:4238–4246
Watanabe T, Watanabe Y, Nakamura K (2003) Myrothecium dimorphum, sp. nov., a soil fungus from beach sand in the Bonin (Ogasawara) islands, Japan. Mycoscience 44:283–286. doi:10.1007/s10267-003-0112-5
White TJ, Bruns TD, Lee SB, Taylor W (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfard H, Sninsky JS, White TJ (eds) PCR-protocols and applications. Academic, New York, pp 315–322
Acknowledgements
The authors gratefully acknowledge the financial support received from the CIUF/CUD (currently ARES, Académie de Recherche et d’Enseignement Supérieur Wallonie-Bruxelles, Commission de la Coopération pour le Dévelopment) through the PIC Project “Reinforcement of the fungal expertise in Ecuador via case studies of fungal plants interactions in selected ecosystems and the development of biotechnology-oriented fungal resource centers”. Ana Gordillo also acknowledges the financial support received from PUCE when working in Ecuador. The authors also thank Petro Amazonas for facilitating access to the oil-polluted ponds and laboratory facilities in the Research Center for Environmental Technologies located in Sacha camp. Strains from Singapore were obtained through cooperation with Olivier Laurence, Mycosphere S.a.r.l. Several strains from Brazil, Cuba and Venezuela were received courtesy of Dr. R.F. Castañeda, INIFAT, Cuba. The authors also warmly thank Stéphanie Huret for her help with the sequencing program.
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Section Editor: Roland Kirschner
MUCL is a member of the Belgian Coordinated Collections of Microorganisms (BCCM™).
This article is part of the “Special Issue on ascomycete systematics in honor of Richard P. Korf who died in August 2016”.
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Gordillo, A., Decock, C. Myrothecium-like (Ascomycota, Hypocreales) species from tropical areas: Digitiseta gen. nov. and additions to Inaequalispora and Parvothecium . Mycol Progress 17, 179–190 (2018). https://doi.org/10.1007/s11557-017-1302-4
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DOI: https://doi.org/10.1007/s11557-017-1302-4