Skip to main content
Log in

Detection of Phoma valerianellae in lamb’s lettuce seeds

  • Published:
Phytoparasitica Aims and scope Submit manuscript

Abstract

After the reappearance in Italy of a foliar disease of lamb’s lettuce (Valerianella olitoria L. Poll. syn. V. locusta L. Betcke) incited by Phoma valerianellae, we set out to measure the level of seed infection by this fungus, using a plating test, and to develop a molecular method for quick and reliable detection of the pathogen in seeds. All six samples of lamb’s lettuce seed tested were contaminated by P. valerianellae at levels of 0.6% to 15%. Surface disinfection of seeds did not eliminate the contamination and only reduced it to between 0.1% and 10%. The need for a sensitive, reliable and rapid diagnostic method for early identification of the fungus exists. We have developed a PCR-based method to identify the fungus in seeds. Variation within the internal transcribed spacer (ITS1, 5.8S sequences and ITS2) region of the rDNA (ITS) was used to characterize the P. valerianellae strains and to design specific primers within the ITS region.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

References

  • Balmas, V., Scherm, B., Ghignone, S., Salem, A. O. M., Cacciola, S. O., & Migheli, Q. (2005). Characterization of Phoma tracheiphila by RAPD-PCR, micro satellite-primed PCR and ITS rDNA sequencing and development of specific primers for in planta PCR detection. European Journal of Plant Pathology, 111, 235–247.

    Article  CAS  Google Scholar 

  • Boerema, G. H., & de Jong, C. B. (1968). Über die samenburtigen Phoma-Arten von Valerianella. Phytopathologische Zeitschrift, 61, 362–371.

    Article  Google Scholar 

  • Ezra, D., Kroitor, T., & Sadowsky, A. (2007). Molecular characterization of Phoma tracheiphila, causal agent of Mal secco disease of citrus, in Israel. European Journal of Plant Pathology, 118, 183–191.

    Article  Google Scholar 

  • Falk, B. W., & Duffus, J. E. (1988). In R. G. Milne (Ed.), The plant viruses. vol. 4. The filamentous plant viruses (p. 275). New York, NY: Plenum Press.

    Google Scholar 

  • Garibaldi, A. (1966). Due nuove malattie della valerianella. Proceedings 1st Congress Mediterranean Phytopathological Union (Bari-Napoli, Italy), pp. 153–156.

  • Garibaldi, A., Gilardi, G., & Gullino, M. L. (2004). Seed transmission of Fusarium oxysporum f.sp. lactucae. Phytoparasitica, 32, 61–65.

    Article  Google Scholar 

  • Gentile, A., Deng, Z. N., Tribulato, E., Albanese, G., Grimaldi, V., Catara, A., et al. (2000). Evaluation of lemon somaclones for tolerance to Mal secco disease by artificial inoculation. Acta Horticulturae, 535, 259–263 (ISHS 2000).

    Google Scholar 

  • Grondeau, C., & Samson, R. (2009). Detection of Acidovorax valerianellae in corn-salad seeds, seed transmission of the pathogen and disease development. Plant Pathology, 58, 846–852.

    Article  Google Scholar 

  • Larsen, R. C., Hollingsworth, C. R., Vandemark, G. J., Gritsenko, M. A., & Gray, F. A. (2002). A rapid method using PCR-based SCAR markers for the detection and identification of Phoma sclerotioides: the cause of brown root rot disease of alfalfa. Plant Disease, 86, 928–932.

    Article  CAS  Google Scholar 

  • Macdonald, J. E., White, G. P., & Côté, M.-J. (2000). Differentiation of Phoma foveata from P. exigua using a RAPD generated PCR-RFLP marker. European Journal of Plant Pathology, 106, 67–75.

    Article  CAS  Google Scholar 

  • Mathur, S. B., & Kongsdal, O. (2003). Common laboratory seed health testing methods for detecting fungi. Bassersdorf, Switzerland: International Seed Testing Association.

    Google Scholar 

  • Nathaniels, N. Q. R. (1985). Phoma valerianellae on corn salad. Plant Pathology, 34, 449–450.

    Article  Google Scholar 

  • Nega, E., Ulrich, R., Werner, S., & Jahn, M. (2003). Hot water treatment of vegetable seed: an alternative seed treatment method to control seed-borne pathogens in organic farming. Zeitschrift fuer Pflanzenkrankheiten und Pflanzenschutz, 110, 220–234.

    Google Scholar 

  • Neergaard, P. (1979). Seed pathology. Vols. I and II. London, UK: MacMillan Press.

    Google Scholar 

  • Pethybridge, S. J., Scott, J. B., & Hay, F. S. (2004). Genetic relationships among isolates of Phoma ligulicola from pyrethrum and chrysanthemum based on ITS sequences and its detection by PCR. Australasian Plant Pathology, 33, 173–181.

    Article  CAS  Google Scholar 

  • Rollo, F., Salvi, R., & Torchia, P. (1990). Highly sensitive and fast detection of Phoma tracheiphila by polymerase chain reaction. Applied Microbiology and Biotechnology, 32, 572–576.

    Article  CAS  PubMed  Google Scholar 

  • Schmitt, E., Koch, D., Stephan, C., Kromphardt, M., Krauthausen, H. J., Forsberg, G., et al. (2009). Journal of Plant Disease and Protection, 116, 200–207.

    CAS  Google Scholar 

  • Somai, B. M., Keinath, A. P., & Dean, R. A. (2002). Development of PCR-ELISA for detection and differentiation of Didymella bryoniae from related Phoma species. Plant Disease, 86, 710–716.

    Article  CAS  Google Scholar 

  • White, T. J., Bruns, T., Lee, S., & Taylor, J. (1990). Amplification and direct sequencing of fungi ribosomal RNA genes for phylogenetics (pp. 315–322). In M. A. Innis, D. H. Gelfand, J. J. Sninsky, & T. J. White (Eds.), PCR protocols. A guide to methods and applications. San Diego, CA, USA: Academic Press.

    Google Scholar 

  • Zhou, L., Bailey, K. L., Chen, C. Y., & Keri, M. (2005). Molecular and genetic analyses of geographic variation in isolates of Phoma macrostoma used for biological weed control. Mycologia, 97, 612–620.

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

This work was supported by a grant from CIPE, Project “Advanced diagnostic tools, disease detection networking and technical extension for non-conventional disease control strategies in vegetable production in Piedmont (ADVANET)”. The authors thank Mrs. Incoronata Luongo for technical support and Dr. Robert Milne for language revision.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Giovanna Gilardi.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Pellegrino, C., Gilardi, G., Gullino, M.L. et al. Detection of Phoma valerianellae in lamb’s lettuce seeds. Phytoparasitica 38, 159–165 (2010). https://doi.org/10.1007/s12600-010-0084-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12600-010-0084-x

Keywords

Navigation