Skip to main content
Log in

Astrosphaeriella is polyphyletic, with species in Fissuroma gen. nov., and Neoastrosphaeriella gen. nov.

  • Published:
Fungal Diversity Aims and scope Submit manuscript

Abstract

Collections of fungi from bamboo and palm plants in Thailand resulted in the identification of several species of Astrosphaeriella, including the type species A. fusispora, which is a synonym of A. stellata. Species of Astrosphaeriella have been previously circumscribed on the basis of morphology and, to a lesser extent, on host affiliation. In order to obtain a phylogenetic understanding of the genus, eleven strains of Astrosphaeriella sensu lato were sequenced in this study. Molecular analyses based on a combined dataset of 18S and 28S nrDNA sequences were carried out to infer the phylogenetic placement of these strains in the Pleosporales. The phylogenetic analyses showed that Astrosphaeriella is polyphyletic, with Astrosphaeriella species clustering in four clades, two clades, including species with slit-like ostioles, clustered in Aigialaceae; the clade that includes the generic type clustered together with Delitschia; and A. Africana, which has striate ascospores, deviated from these three clades and had a basal position in the Pleosporales. A new combination in Fissuroma gen. nov. and new genus Neoastrosphaeriella are introduced in Aigialaceae to include the species with slit-like ascomata.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8
Fig. 9

Similar content being viewed by others

References

  • Albrectsen BR, Björkén L, Varad A, Hagner Ã… (2010) Endophytic fungi in European aspen (Populus tremula) leaves—diversity, detection, and a suggested correlation with herbivory resistance. Fungal Divers 41(1):17–28

    Article  Google Scholar 

  • Alves A, Correia A, Phillips AJL (2006) Multi-gene genealogies and morphological data support Diplodia cupressi sp. nov., previously recognized as D. pinea f. sp. cupressi, as a distinct species. Fungal Divers 23:1–15

    Google Scholar 

  • Aptroot A (1995) Redisposition of some species excluded from Didymosphaeria (Ascomycotina). Nova Hedwigia 60(3–4):325–379

    Google Scholar 

  • Aptroot A (2009) Additional lichen records from Australia 70. Species of Anisomeridium and Mycomicrothelia, with a note on Arthopyrenia. Australasian Lichenology 64:22–25

    Google Scholar 

  • Barr M (1987) Prodromus to class Loculoascomycetes. Newell. Inc, Amherst

    Google Scholar 

  • Barr ME (1990) Melanommatales (Loculoascomycetes). American Flora Series II, vol 13. New York Botanical Garden

  • Cai L, Zhang K, McKenzie EHC, Hyde KD (2003) Freshwater fungi from bamboo and wood submerged in the Liput River in the Philippines. Fungal Divers 13(1):1–12

    Google Scholar 

  • Cai L, Hyde KD, Tsui CKM (2006a) Genera of freshwater fungi. Fungal Divers Res Ser 17:1–261

    Google Scholar 

  • Cai L, Jeewon R, Hyde KD (2006b) Phylogenetic investigations of Sordariaceae based on multiple gene sequences and morphology. Mycol Res 110(2):137–150

    Article  PubMed  CAS  Google Scholar 

  • Cai L, Guo XY, Hyde KD (2008) Morphological and molecular characterisation of a new anamorphic genus Cheirosporium, from freshwater in China. Persoonia 20:53–58

    Article  PubMed  CAS  Google Scholar 

  • Cai L, Wu WP, Hyde KD (2009) Phylogenetic relationships of Chalara and allied species inferred from ribosomal DNA sequences. Mycol Prog 8(2):133–143

    Article  Google Scholar 

  • Camara MPS, Palm ME, van Berkum P, O'Neill NR (2002) Molecular phylogeny of Leptosphaeria and Phaeosphaeria. Mycologia 94(4):630–640

    Article  PubMed  CAS  Google Scholar 

  • Cannon PF, Kirk PM (2007) Fungal families of the world. CABI Publishing

  • Chen CY, Hsieh WH (2004) Astrosphaeriella from Taiwan, including two new species. Botanical Bulletin of Academia Sinica 45:171–178

    Google Scholar 

  • Chen CY, Huang JW (2006) Astrosphaeriella linguiformis, a new species on bamboo. Mycotaxon 98:119–123

    Google Scholar 

  • Chevenet F, Brun C, Banuls AL, Jacq B, Christen R (2006) TreeDyn: towards dynamic graphics and annotations for analyses of trees. BMC Bioinforma 7:439

    Article  Google Scholar 

  • Chilvers MI, Rogers JD, Dugan FM, Stewart JE, Chen W, Peever TL (2009) Didymella pisi sp. nov., the teleomorph of Ascochyta pisi. Mycol Res 113(3):391–400

    Article  PubMed  CAS  Google Scholar 

  • Crous PW (2006) Phaeosphaeriopsis musae M. Arzanlou & Crous, sp. nov. Fungal Planet 9(1)

  • Frohlich J, Hyde K (1995) Astrospaeriella fronsicola sp. nov. associated with leaf spots of Oraniopsis and other palms. Mycol Res 99(4):453–456

    Article  Google Scholar 

  • Fröhlich J, Hyde KD (2000) Palm microfungi. Fungal Divers Res Ser 3:1–393

    Google Scholar 

  • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. In: Nucleic Acids Symposium Series, pp 95–98

  • Hara K (1913) Mycological notes 6. Botanical Magazine, Tokyo 27:472–474

    Google Scholar 

  • Hawksworth D (1981) Astrosphaeriella Sydow, a misunderstood genus of melanommataceous pyrenomycetes. Bot J Linn Soc 82(1):35–59

    Article  Google Scholar 

  • Hawksworth D, Ainsworth SBC (1995) Bisby’s dictionary of the fungi, 8th edn. CAB International, UK

    Google Scholar 

  • Hawksworth D, Boise J (1985) Some additional species of Astrosphaeriella, with a key to the members of the genus. Sydowia 38:114–124

    Google Scholar 

  • Hillis DM, Bull JJ (1993) An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst Biol 42(2):182

    Google Scholar 

  • Hino I, Katumoto K (1955) Illustrationes fungorum bambusicolorum III. Bull Fac Agric Yamaguchi Univ 6:29–68

    Google Scholar 

  • Hsieh W, Chen C, Wang C (2000) Taiwan ascomycetes-Pyrenomycetes and Loculoascomycetes. Chinagraphics, Taichung, Taiwan 244

  • Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17(8):754–755

    Article  PubMed  CAS  Google Scholar 

  • Hyde KD (1992) Fungi from decaying intertidal fronds of Nypa fruticans, including three new genera and four new species. Bot J Linn Soc 110(2):95–110

    Article  Google Scholar 

  • Hyde KD (1994a) Aquatic fungi on rachides of Livistona in the Western Province of Papua New Guinea. Mycol Res 98(7):719–725

    Article  Google Scholar 

  • Hyde KD (1994b) Fungi from rachides of Livistona in the Western Province of Papua New Guinea. Bot J Linn Soc 116(4):315–324

    Article  Google Scholar 

  • Hyde KD, Fröhlich J (1998) Fungi from palms XXXVII. the genus Astrosphaeriella, including ten new species. Sydowia 50(1):81–132

    Google Scholar 

  • Hyde KD, Aptroot A, Fröhlich J, Taylor JE (2000a) Fungi from palms. XLIII. Lophiostoma and Astrosphaeriella species with slit-like ostioles. Nova Hedwigia 70(1/2):143–160

    Google Scholar 

  • Hyde KD, Taylor JE, Fröhlich J (2000b) Genera of Ascomycetes from palms. Fungal Divers Res Ser 2:1–247

    Google Scholar 

  • Hyde KD, McKenzie EHC, KoKo TW (2011) Towards incorporating anamorphic fungi in a natural classification–checklist and notes for 2010. Mycosphere 2(1):1–88

    Google Scholar 

  • Kirk P, Cannon PF, Minter D, Stalpers J (2008) Ainsworth & Bisby’s dictionary of the fungi, 10th edn. CAB International, UK

    Google Scholar 

  • Kodsueb R, Jeewon R, Vijaykrishna D, Mckenzie E, Lumyong P, Lumyong S, Hyde KD (2006) Systematic revision of Tubeufiaceae based on morphological and molecular data. Fungal Divers 21:105–130

    Google Scholar 

  • Kohlmeyer J, Vittal B (1986) Lophiostoma mangrovis, a new marine ascomycete from the tropics. Mycologia 78:485–489

    Article  Google Scholar 

  • Kruys Ã…, Wedin M (2009) Phylogenetic relationships and an assessment of traditionally used taxonomic characters in the Sporormiaceae (Pleosporales, Dothideomycetes, Ascomycota), utilising multi-gene phylogenies. Syst Biodivers 7(4):465–478

    Article  Google Scholar 

  • Kruys A, Eriksson OE, Wedin M (2006) Phylogenetic relationships of coprophilous Pleosporales (Dothideomycetes, Ascomycota), and the classification of some bitunicate taxa of unknown position. Mycol Res 110(5):527–536

    Article  PubMed  CAS  Google Scholar 

  • Liu JK, Chomnunti P, Cai L, Phookamsak R, Chukeatirote E, Jones EBG, Moslem M, Hyde KD (2010) Phylogeny and morphology of Neodeightonia palmicola sp. nov. from palms. Sydowia 62(2):261–276

    Google Scholar 

  • Lumbsch HT, Huhndorf SM (2007) Outline of Ascomycota–2007. Myconet 13:1–58

    Google Scholar 

  • Lumbsch HT, Huhndorf SM (2010) Outline of Ascomycota–2010. Myconet 14:1–64

    Google Scholar 

  • Luttrell E (ed) (1973) Loculoascomycetes, vol 4. The fungi: an advanced treatise. Academic, New York

    Google Scholar 

  • Manamgoda DS, Cai L, Bahkali AH, Chukeatirote E, Hyde KD (2011) Cochliobolus: an overview and current status of species. Fungal Divers. doi:10.1007/s13225-011-0139-4

  • Miller MA, Pfeiffer W, Schwartz T (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Gateway Computing Environments Workshop 2010 (GCE), pp 1–8

  • Morin L, Shivas RG, Piper MC, Tan YP (2010) Austropleospora osteospermi gen. et sp. nov. and its host specificity and distribution on Chrysanthemoides monilifera ssp. rotundata in Australia. Fungal Divers 40(1):65–74

    Article  Google Scholar 

  • Müller E, Arx JA (1962) Die Gattungen der didymosporen Pyrenomyceten, vol 11, Berträge zur Krytogamenflora der Schweiz

  • Müller E, Dennis RWG (1965) Fungi venezuelani: VIII: Plectascales, Sphaeriales, Loculoascomycetes. Kew Bulletin 19(3):357–386

    Article  Google Scholar 

  • Nylander JAA (2004) MrModeltest 2.0. Program distributed by the author. Evolutionary Biology Centre, Uppsala University

  • Page RDM (1996) TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12(4):357–358

    PubMed  CAS  Google Scholar 

  • Paz Z, Komon-Zelazowska M, Druzhinina I, Aveskamp M, Shnaiderman A, Aluma Y, Carmeli S, Ilan M, Yarden O (2010) Diversity and potential antifungal properties of fungi associated with a Mediterranean sponge. Fungal Divers 42(1):17–26

    Article  Google Scholar 

  • Pérez C, Wingfield M, Slippers B, Altier N, Blanchette R (2010) Endophytic and canker-associated Botryosphaeriaceae occurring on non-native Eucalyptus and native Myrtaceae trees in Uruguay. Fungal Divers 41(1):53–69

    Article  Google Scholar 

  • Phillips AJL, Alves A, Pennycook SR, Johnston PR, Ramaley A, Akulov A, Crous PW (2008) Resolving the phylogenetic and taxonomic status of dark-spored teleomorph genera in the Botryosphaeriaceae. Persoonia 21:29–55

    Article  PubMed  CAS  Google Scholar 

  • Ramesh C (2003) Loculoascomycetes from India. Frontiers of fungal diversity in India 457

  • Rannala B, Yang Z (1996) Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. J Mol Evol 43(3):304–311

    Article  PubMed  CAS  Google Scholar 

  • Rehm H (1913a) Ascomycetes philippinenses III. Philippine Journal of Science, Section C, Botany 8:391–405

    Google Scholar 

  • Rehm H (1913b) Ascomycetes philippinenses IV. Elmer, Leafl Philip Bot 6:1935–1947

    Google Scholar 

  • Rogers J, Barr M (2003) Astrosphaeriella longispora, a new tropical species with large ascospores. Astrosphaeriella longispora, una nueva especie tropical con grandes ascósporas. Sydowia 55(2):355–358

    Google Scholar 

  • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19(12):1572

    Article  PubMed  CAS  Google Scholar 

  • Sakayaroj J, Preedanon S, Supaphon O, Jones EBG, Phongpaichit S (2010) Phylogenetic diversity of endophyte assemblages associated with the tropical seagrass Enhalus acoroides in Thailand. Fungal Divers 42(1):27–45

    Article  Google Scholar 

  • Sánchez Márquez S, Bills G, Zabalgogeazcoa I (2008) Diversity and structure of the fungal endophytic assemblages from two sympatric coastal grasses. Fungal Divers 33:87–100

    Google Scholar 

  • Sánchez Márquez S, Bills GF, Domínguez Acuña L, Zabalgogeazcoa I (2010) Endophytic mycobiota of leaves and roots of the grass Holcus lanatus. Fungal Divers 41(1):115–123

    Article  Google Scholar 

  • Scheinpflug H (1958) Untersuchungen über die Gattung Didymosphaeria Fuck. und einige verwandte Gattungen. Ber Schweiz Bot Ges 68:325–383

    Google Scholar 

  • Schoch CL, Crous PW, Groenewald JZ, Boehm EWA, Burgess TI, de Gruyter J, de Hoog GS, Dixon LJ, Grube M, Gueidan C, Harada Y, Hatakeyama S, Hirayama K, Hosoya T, Huhndorf SM, Hyde KD, Jones EB, Kohlmeyer J, Kruys A, Li YM, Lucking R, Lumbsch HT, Marvanova L, Mbatchou JS, McVay AH, Miller AN, Mugambi GK, Muggia L, Nelsen MP, Nelson P, Owensby CA, Phillips AJ, Phongpaichit S, Pointing SB, Pujade-Renaud V, Raja HA, Plata ER, Robbertse B, Ruibal C, Sakayaroj J, Sano T, Selbmann L, Shearer CA, Shirouzu T, Slippers B, Suetrong S, Tanaka K, Volkmann-Kohlmeyer B, Wingfield MJ, Wood AR, Woudenberg JH, Yonezawa H, Zhang Y, Spatafora JW (2009) A class–wide phylogenetic assessment of Dothideomycetes. Stud Mycol 64:1–15

    Article  PubMed  CAS  Google Scholar 

  • Solomon PS, Lowe RGT, Tan KC, Waters ODC, Oliver RP (2006) Stagonospora nodorum: cause of stagonospora nodorum blotch of wheat. Mol Plant Pathol 7(3):147–156

    Article  PubMed  Google Scholar 

  • Stamatakis A (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688–2690

    Article  PubMed  CAS  Google Scholar 

  • Stamatakis A, Hoover P, Rougemont J (2008) A Rapid Bootstrap Algorithm for the RAxML Web Servers. Sys Bio 57:758–771

    Article  Google Scholar 

  • Suetrong S, Schoch CL, Spatafora JW, Kohlmeyer J, Volkmann-Kohlmeyer B, Sakayaroj J, Phongpaichit S, Tanaka K, Hirayama K, Jones EBG (2009) Molecular systematics of the marine Dothideomycetes. Stud Mycol 64(1):155–173

    Article  PubMed  CAS  Google Scholar 

  • Summerell BA, Laurence MH, Liew ECY, Leslie JF (2010) Biogeography and phylogeography of Fusarium: a review. Fungal Divers 44(1):3–13. doi:10.1007/s13225-010-0060-2

    Article  Google Scholar 

  • Summerell BA, Leslie JF, Liew ECY, Laurence MH, Bullock S, Petrovic T, Bentley AR, Howard CG, Peterson SA, Walsh JL (2011) Fusarium species associated with plants in Australia. Fungal Divers 46(1):1–27. doi:10.1007/s13225-010-0075-8

    Article  Google Scholar 

  • Swofford DL (2002) PAUP: phylogenetic analysis using parsimony, version 4.0 b10. Sinauer Associates, Sunderland

    Google Scholar 

  • Sydow H, Sydow P (1913) Novae fungorum species X. Annales Mycologici 11:254–271

    Google Scholar 

  • Tanaka K, Harada Y (2005) Bambusicolous fungi in Japan (4): a new combination, Astrosphaeriella aggregata. Mycoscience 46(2):114–118

    Article  Google Scholar 

  • Tanaka K, Hirayama K, Yonezawa H, Hatakeyama S, Harada Y, Sano T, Shirouzu T, Hosoya T (2009) Molecular taxonomy of bambusicolous fungi: Tetraplosphaeriaceae, a new pleosporalean family with Tetraploa-like anamorphs. Stud Mycol 64(1):175–209

    Article  PubMed  CAS  Google Scholar 

  • Taylor JE, Hyde KD (2003) Microfungi of tropical and temperate palms. Fungal Divers Res Ser 12:1–459

    Google Scholar 

  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25(24):4876

    Article  PubMed  CAS  Google Scholar 

  • Tsui CKM, Hyde KD, Hodgkiss IJ (2001) Paraniesslia tuberculata gen. et sp. nov., and new records or species of Clypeosphaeria, Leptosphaeria and Astrosphaeriella in Hong Kong freshwater habitats. Mycologia 93(5):1002–1009

    Article  Google Scholar 

  • Vergnes DM, Zhanarbekova A, Renard ME, Duveiller E, Maraite H (2006) Mating types of Phaeosphaeria nodorum (anamorph Stagonospora nodorum) from Central Asia. J Phytopathol 154(5):317–319

    Article  Google Scholar 

  • Vilgalys R, Hester M (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4238–4246

    PubMed  CAS  Google Scholar 

  • von Arx J, Müller E (1975) A re-evaluation of the bitunicate ascomycetes with keys to families and genera. Stud Mycol 9:1–159

    Google Scholar 

  • Wang YZ, Aptroot A, Hyde KD (2004) Revision of the genus Amphisphaeria. Hong Kong SAR, China. Fungal Divers Res Ser 13:1–168

    Google Scholar 

  • Wetzel H, Hulbert S, Tisserat N (1999) Molecular evidence for the presence of Ophiosphaerella narmarin. comb., a cause of spring dead spot of Bermuda grass. Mycol Res 103:981–989

    Article  CAS  Google Scholar 

  • White DG (1999) Compendium of corn diseases. American Phytopathological Society (APS Press)

  • White T, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: A Guide to Methods and Applications 18:315–322

    Google Scholar 

  • Yue J, Eriksson O (1986) Studies on Chinese Ascomycetes. 3. Astrosphaeriella lageniformis. Mycotaxon 27:93–98

    Google Scholar 

  • Zhang Y, Fournier J, Pointing SB, Hyde KD (2008a) Are Melanomma pulvis-pyrius and Trematosphaeria pertusa congeneric? Fungal Divers 33:47–60

    CAS  Google Scholar 

  • Zhang Y, Jeewon R, Fournier J, Hyde KD (2008b) Multi-gene phylogeny and morphotaxonomy of Amniculicola lignicola: a novel freshwater fungus from France and its relationships to the Pleosporales. Mycol Res 112(10):1186–1194

    Article  PubMed  CAS  Google Scholar 

  • Zhang Y, Schoch CL, Fournier J, Crous PW, De Gruyter J, Woudenberg JHC, Hirayama K, Tanaka K, Pointing SB, Spatafora JW, Hyde KD (2009a) Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation. Stud Mycol 64(1):85–102

    Article  PubMed  CAS  Google Scholar 

  • Zhang Y, Wang HK, Fournier J, Crous PW, Jeewon R, Pointing SB, Hyde KD (2009b) Towards a phylogenetic clarification of Lophiostoma/Massarina and morphologically similar genera in the Pleosporales. Fungal Divers 38:225–251

    Google Scholar 

  • Zhang Y, Crous PW, Schoch CL, Hyde KD (2012) Pleosporales. Fungal Divers 52:1–225. doi:10.1007/s13225-011-0117-x

    Google Scholar 

  • Zhaxybayeva O, Gogarten JP (2002) Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses. BMC Genomics 3(1):4

    Article  PubMed  Google Scholar 

  • Zhou DQ, Cai L, Hyde KD (2003) Astrosphaeriella and Roussoella species on bamboo from Hong Kong and Yunnan, China, including a new species of Roussoella. Cryptogam Mycol 24(3):191–197

    Google Scholar 

Download references

Acknowledgments

We would like to thank C.L. Schoch for providing valuable suggestions on phylogeny. The Mushroom Research Foundation, Mae Taeng District, Chiang Mai Province, Thailand is acknowledged for providing postgraduate scholarship support and facilities to JK Liu. The authors also thank P. Chomnunti, L. Cai, Y.Y. Su and F. Liu for their assistance in molecular work. Appreciation is extended to the Thailand Research Fund BRG528002, The Global Research Network for Fungal Biology and King Saud University for supporting this work. In addition, thanks to J. Fournier for providing material of Astrosphaeriella on palms and Kanjana Niraphai (MFU) for herbarium assistance.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Yong Wang or Kevin D. Hyde.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary Table 1

Isolates of Pleosporales included in this study. Newly deposited sequences are shown in bold. (DOC 115 kb)

Rights and permissions

Reprints and permissions

About this article

Cite this article

Liu, JK., Phookamsak, R., Jones, E.B.G. et al. Astrosphaeriella is polyphyletic, with species in Fissuroma gen. nov., and Neoastrosphaeriella gen. nov.. Fungal Diversity 51, 135–154 (2011). https://doi.org/10.1007/s13225-011-0142-9

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s13225-011-0142-9

Keywords

Navigation