Abstract
This article provides morphological descriptions and illustrations of microfungi associated with the invasive weed, Chromolaena odorata, which were mainly collected in northern Thailand. Seventy-seven taxa distributed in ten orders, 23 families (of which Neomassarinaceae is new), 12 new genera (Chromolaenicola, Chromolaenomyces, Longiappendispora, Pseudocapulatispora, Murichromolaenicola, Neoophiobolus, Paraleptospora, Pseudoroussoella, Pseudostaurosphaeria, Pseudothyridariella, Setoarthopyrenia, Xenoroussoella), 47 new species (Aplosporella chromolaenae, Arthrinium chromolaenae, Chromolaenicola chiangraiensis, C. lampangensis, C. nanensis, C. thailandensis, Chromolaenomyces appendiculatus, Diaporthe chromolaenae, Didymella chromolaenae, Dyfrolomyces chromolaenae, Leptospora chromolaenae, L. phraeana, Longiappendispora chromolaenae, Memnoniella chromolaenae, Montagnula chiangraiensis, M. chromolaenae, M. chromolaenicola, M. thailandica, Murichromolaenicola chiangraiensis, M. chromolaenae, Muyocopron chromolaenae, M. chromolaenicola, Neomassarina chromolaenae, Neoophiobolus chromolaenae, Neopyrenochaeta chiangraiensis, N. chromolaenae, N. thailandica, N. triseptatispora, Nigrograna chromolaenae, Nothophoma chromolaenae, Paraleptospora chromolaenae, P. chromolaenicola, Patellaria chromolaenae, Pseudocapulatispora longiappendiculata, Pseudoroussoella chromolaenae, Pseudostaurosphaeria chromolaenae, P. chromolaenicola, Pseudothyridariella chromolaenae, Pyrenochaetopsis chromolaenae, Rhytidhysteron chromolaenae, Setoarthopyrenia chromolaenae, Sphaeropsis chromolaenicola, Tremateia chiangraiensis, T. chromolaenae, T. thailandensis, Xenoroussoella triseptata, Yunnanensis chromolaenae), 12 new host records, three new taxonomic combinations (Chromolaenicola siamensis, Pseudoroussoella elaeicola, Pseudothyridariella mahakashae), and two reference specimens (Torula chromolaenae, T. fici) are described and illustrated. Unlike some other hosts, e.g. bamboo (Poaceae) and Pandanaceae, the dominant group of fungi on Siam weed were Dothideomycetes. Only 15 species previously recorded from northern Thailand were found in this study. Most of the taxa are likely to have jumped hosts from surrounding plants and are unlikely to be a specialist to Siam weed. Most fungal families found on Siam weed had divergence estimates with stem ages in the Cretaceous, which coincided with the expected origin of the host family (Asteraceae). This further indicates that the species have jumped hosts, as it is unlikely that the taxa on the alien Siam weed came from the Americas with its host. They may, however, have jumped from other Asteraceae hosts. In a preliminary screening 40 (65%) of the 62 species tested showed antimicrobial activity and thus, the fungi associated with C. odorata may be promising sources of novel bioactive compound discovery. We provide a checklist of fungi associated with C. odorata based on the USDA Systematic Mycology and Microbiology Laboratory (SMML) database, relevant literature and our study. In total, 130 taxa (116 identified and 14 unidentified species) are distributed in 20 orders, 48 families, and 85 genera. Pseudocercospora is the most commonly encountered genus on Siam weed.
Similar content being viewed by others
References
Aba PE, Joshua PE, Ezeonuogu FC et al (2015) Possible anti-diarrhoeal potential of ethanol leaf extract of Chromolaena odorata in castor oil-induced rats. J Complement Integr Med 12:301–306
Abbasi AM, Khan MA, Ahmad M et al (2010) Ethnobotanical study of wound healing herbs among the tribal communities in Northern Himalaya Ranges district Abbottabad, Pakistan. Pak J Bot 42:3747–3753
Abdel-Wahab F (2017) Natural products of Nothophoma multilocularis sp. nov. an endophyte of the medicinal plant Rhazya stricta. Mycosphere 8:1185–1200
Adedapo AA, Oyagbemi AA, Fagbohun OA et al (2016) Evaluation of the anticancer properties of the methanol leaf extract of Chromolaena odorata on HT29 lung cancer cell line. FASEB J 30:1193.6
Agunbiade FO, Fawale AT (2009) Use of Siam weed biomarker in assessing heavy metal contaminations in traffic and solid waste polluted areas. Int J Environ Sci Technol 6:267–276
Ahmadpour SA, Farokhinejad R, Mehrabi-Koushki M (2017) Further characterization and pathogenicity of Didymella microchlamydospora causing stem necrosis of Morus nigra in Iran. Mycosphere 8:835–852
Ahmed SA, van de Sande WWJ, Stevens DA et al (2014) Revision of agents of black-grain eumycetoma in the order Pleosporales. Persoonia 33:141–154
Ahmed SA, González GM, Tirado-Sánchez A et al (2018) Nigrograna mackinnonii, Not Trematosphaeria grisea (syn., Madurella grisea), is the main agent of black grain eumycetoma in Latin America. J Clin Microbiol 56:e01723
Akinmoladun AC, Ibukun EO, Dan Ologe IA (2007) Phytochemical constituents and antioxidant properties of extracts from the leaves of Chromolaena odorata. Sci Res Essay 2:191–194
Alcorn JL, Irwin JAG (1987) Acrocalymma medicaginis gen. et sp. nov. causing root and crown rot of Medicago sativa in Australia. Trans Br Mycol Soc 88:163–167
Amazu LU, Omoregie P, Ajuwo AO, Ifezulike CC (2013) Anticonvulsant potency of the leaf extract of Chromolaena odorata in rats. Unique Res J Med Med Sci 1:64–69
Anolifo GO, Vwioko DE (2001) Tolerance of Chromolaena odorata (L) K. and R. grown in soil contaminated with spent lubricating oil. J Trop Biosci 1:20–24
Aptroot A (2004) Two new ascomycetes with long gelatinous appendages collected from monocots in the tropics. Stud Mycol 50:307–311
Ariyawansa HA, Kang J-C, Alias SA et al (2013) Towards a natural classification of Dothideomycetes: the genera Dermatodothella, Dothideopsella, Grandigallia, Hysteropeltella and Gloeodiscus (Dothideomycetes incertae sedis). Phytotaxa 147:35–47
Ariyawansa HA, Hawksworth DL, Hyde KD et al (2014a) Epitypification and neotypification: guidelines with appropriate and inappropriate examples. Fungal Divers 69:57–91
Ariyawansa HA, Tanaka K, Thambugala KM et al (2014b) A molecular phylogenetic reappraisal of the Didymosphaeriaceae (= Montagnulaceae). Fungal Divers 68:69–104
Ariyawansa HA, Hyde KD, Jayasiri SC et al (2015) Fungal diversity notes 111–252—taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers 75:27–274
Arthur JC (1918a) Uredinales of Costa Rica based on collections by E.W.D., Holway. Mycologia 10:111–154
Arthur JC (1918b) Uredinales of Guatemala based on collections by E.W.D. Holway. I. Introduction, Coleosporiaceae and Uredinaceae. Am J Bot 5:325–336
Arthur JC (1922) Uredinales collected by R. Thaxter and J.B. Rorer in Trinidad. Bot Gaz 73:58–69
Asomugha RH, Okafor PN, Ijeh II et al (2014) Hepatic effects of aqueous extract of Chromolaena odorata in male Wistar albino rats. Pharmacol Online 1:127–136
Atagana HI (2011) The potential of Chromolaena odorata (L.) to decontaminate used engine oil impacted soil under greenhouse conditions. Int J Phytoremediation 13:627–641
Atindehou M, Lagnika L, Guérold B et al (2013) Isolation and identification of two antibacterial agents from Chromolaena odorata L. activity against four diarrheal strains. Adv Microbiol 3:115–121
Aveskamp MM, de Gruyter J, Woudenberg JHC et al (2010) Highlights of the Didymellaceae: a polyphasic approach to characterise Phoma and related pleosporalean genera. Stud Mycol 65:1–60
Ayerst G (1969) The effects of moisture and temperature on growth and spore germination in some fungi. J Stored Prod Res 5:127–141
Ayyanar M, Ignacimuthu S (2009) Herbal medicines for wound healing among tribal people in Southern India: ethnobotanical and scientific evidences. Int J Appl Res Nat Prod 2:29–42
Baker RED, Dale WT (1951) Fungi of Trinidad and Tobago. Mycol Pap 33:1–123
Balouiri M, Sadiki M, Ibnsouda SK (2016) Methods for in vitro evaluating antimicrobial activity: a review. J Pharm Anal 6:71–79
Barhoom S, Sharon A (2004) cAMP regulation of “pathogenic” and “saprophytic” fungal spore germination. Fungal Genet Biol FG B 41:317–326
Barku VY, Boahen YO, Dali GA (2014) Ethnobotanical study of wound healing plants in Kpando traditional area, Ghana. Int J Phytomed 6:564–572
Barr ME (1979) A classification of Loculoascomycetes. Mycologia 71:935–957
Barr ME (1990) Prodromus to nonlichenized, pyrenomycetous members of class Hymenoascomycetes. Mycotaxon 39:98–100
Barreda VD, Palazzesi L, Tellería MC et al (2015) Early evolution of the angiosperm clade Asteraceae in the Cretaceous of Antarctica. Proc Natl Acad Sci USA 112:10989–10994
Barreto RW, Evans HC (1994) The mycobiota of the weed Chromolaena odorata in southern Brazil with particular reference to fungal pathogens for biological control. Mycol Res 98:1107–1116
Bassett IE, Beggs JR, Paynter Q (2010) Decomposition dynamics of invasive alligator weed compared with native sedges in a Northland lake. New Zeal J Ecol 34:324–331
Batista AC, Ciferri R (1962) The Chaetothyriales. Beih. Sydowia 3:1–129
Berlese AN (1896) Icones fungorum. Pyrenomycetes 2:1–216
Berndt R (2004) A checklist of Costa Rican rust fungi. In Agerer R, Piepenbring M, Blanz P (eds) Frontiers in basidiomycote mycology, pp 185–236
Bissett J, Gams W, Jaklitsch W, Samuels GJ (2015) Accepted Trichoderma names in the year 2015. IMA Fungus 6:263–295
Boehm EWA, Mugambi GK, Miller AN et al (2009a) A molecular phylogenetic reappraisal of the Hysteriaceae, Mytilinidiaceae and Gloniaceae (Pleosporomycetidae, Dothideomycetes) with keys to world species. Stud Mycol 64:49–83
Boehm EWA, Schoch CL, Spatafora JW (2009b) On the evolution of the Hysteriaceae and Mytilinidiaceae (Pleosporomycetidae, Dothideomycetes, Ascomycota) using four nuclear genes. Mycol Res 113:461–479
Boehm EWA, Marson G, Mathiassen GH et al (2015) An overview of the genus Glyphium and its phylogenetic placement in Patellariales. Mycologia 107:607–618
Boerema GH, de Gruyer J, Noordeloos ME et al (2004) Phoma identification manual. Differentiation of specific and infra-specific taxa in culture. CABI Publishing, Wallingford
Boonyuen N, Manoch L, Chamswarng C et al (2014) Fungal occurrence on sugarcane filter cake and bagasse isolated from sugar refineries in Thailand. Thai J Agric Sci 47:77–86
Boudjeko T, Megnekou R, Woguia AL et al (2015) Antioxidant and immunomodulatory properties of polysaccharides from Allanblackia floribunda Oliv stem bark and Chromolaena odorata (L.) King and H.E. Robins leaves. BMC Res Notes 8:759
Braun U, Sivapalan A (1999) Cercosporoid hyphomycetes from Brunei. Fungal Diver 3:1–27
Březina S, Koubek T, Münzbergová Z, Herben T (2006) Ecological benefits of integration of Calamagrostis epigejos ramets under field conditions. Flora Morphol Distrib Funct Ecol Plants 201:461–467
Burgess TI, Crous CJ, Slippers B et al (2016) Tree invasions and biosecurity: eco-evolutionary dynamics of hitchhiking fungi. AoB Plants 8:plw076
Buritica P, Pardo Cardona VM (1996) Flora Uredineana Colombiana. Rev Acad Colomb Cienc 20:183–236
Buzugbe HS, Eze PM, Chukwunwejim CR et al (2018) Investigation of secondary metabolites of an endophytic fungus isolated from the leaves of Chromolaena odorata for possible antimicrobial and antioxidant activities. Pharm Chem J 5:72–77
Cai L, Ji KF, Hyde KD (2006) Variation between freshwater and terrestrial fungal communities on decaying bamboo culms. Antonie Van Leeuwenhoek 89:293–301
Carroll G (1988) Fungal endophytes in stems and leaves: from latent pathogen to mutualistic symbiont. Ecology 69:2–9
Catarino L, Indjai B, Duarte MC, Monteiro F (2019) Chromolaena odorata invasion in Guinea-Bissau (West Africa): first records and trends of expansion. BioInvasions Rec 8:190–198
Chardon CE, Toro RA (1930) Mycological explorations of Colombia. J Dept Agric Porto Rico 14:195–369
Chardon CE, Toro RA (1934) Mycological Explorations of Venezuela. Monogr Univ Puerto Rico B 2:1–351
Chauhan BS, Johnson DE (2008) Germination ecology of two troublesome Asteraceae species of rainfed rice: Siam Weed (Chromolaena odorata) and Coat Buttons (Tridax procumbens). Weed Sci 56:567–573
Chauhan NM, Gutama AD, Aysa A (2019) Endophytic fungal diversity isolated from different agro-ecosystem of Enset (Ensete ventericosum) in Gedeo zone, SNNPRS, Ethiopia. BMC Microbiol 19:172
Chaverri P, Samuels GJ (2013) Evolution of habitat preference and nutrition mode in a cosmopolitan fungal genus with evidence of interkingdom host jumps and major shifts in ecology. Evolution 67:2823–2837
Chaverri P, Branco-Rocha F, Jaklitsch W et al (2015) Systematics of the Trichoderma harzianum species complex and the re-identification of commercial biocontrol strains. Mycologia 107:558–590
Chen K, Zhuang WY (2017) Seven soil-inhabiting new species of the genus Trichoderma in the Viride clade. Phytotaxa 312:28–46
Chen K, Wu XQ, Huang MX, Han YY (2014) First report of brown culm streak of Phyllostachys praecox caused by Arthrinium arundinis in Nanjing, China. Plant Dis 98:1274
Chen Q, Jiang JR, Zhang GZ et al (2015) Resolving the Phoma enigma. Stud Mycol 82:137–217
Chen Q, Hou LW, Duan WJ et al (2017) Didymellaceae revisited. Stud Mycol 87:105–159
Chevallier FF (1826) Flore générale des environs de Paris, vol I. Ferra LibrairieEditeur, Paris
Chomnunti P, Hongsanan S, Hudson BA et al (2014) The sooty moulds. Fungal Divers 66:1–36
Ciferri R (1961) Mycoflora domingensis integrata. Quaderno 19:1–539
Clements FE, Shear CL (1931) The genera of fungi. HW Wilson Co. Publ., Minneapolis
Colegrave N (2012) The evolutionary success of sex. EMBO Rep 13:774–778
Corda ACJ (1838) Patellariaceae in Icones Fungorum hucusque cognitorum 2:1–43
Cronk Q, Fuller J (1995) Plant invaders: the threat to natural ecosystems. Chapman and Hall Publishing Co, London
Crous PW, Groenewald JZ (2013) A phylogenetic re-evaluation of Arthrinium. IMA Fungus 4:133–154
Crous PW, Slippers B, Wingfield MJ et al (2006) Phylogenetic lineages in the Botryosphaeriaceae. Stud Mycol 55:235–253
Crous PW, Shivas RG, Quaedvlieg W et al (2014) Fungal Planet description sheets: 214–280. Persoonia 32:184–306
Crous PW, Carris LM, Giraldo A et al (2015a) The Genera of Fungi—fixing the application of the type species of generic names—G2: Allantophomopsis, Latorua, Macrodiplodiopsis, Macrohilum, Milospium, Protostegia, Pyricularia, Robillarda, Rotula, Septoriella, Torula, and Wojnowicia. IMA Fungus 6:163–198
Crous PW, Schumacher RK, Wingfield MJ et al (2015b) Fungal systematics and evolution: FUSE 1. Sydowia 67:81–118
Crous PW, Wingfield MJ, Guarro J et al (2015c) Fungal planet description sheets: 320–370. Persoonia 34:167–266
Crous PW, Wingfield MJ, Le Roux JJ et al (2015d) Fungal planet description sheets: 371–399. Persoonia 35:264–327
Crous PW, Wingfield MJ, Burgess TI et al (2016) Fungal planet description sheets: 469–557. Persoonia 37:218–403
Crous PW, Wingfield MJ, Burgess TI et al (2017) Fungal Planet description sheets: 625–715. Persoonia 39:270–467
Crous PW, Luangsa-ard JJ, Wingfield MJ et al (2018a) Fungal Planet description sheets: 785–867. Persoonia 41:238–417
Crous PW, Schumacher RK, Wingfield MJ et al (2018b) New and interesting fungi. 1. Fungal Syst Evol 1:169–215
da Cunha KC, Sutton DA, Gené J et al (2014) Pithomyces species (Montagnulaceae) from clinical specimens: identification and antifungal susceptibility profiles. Med Mycol 52:748–757
Dagno K, Lahlali R, Diourté M, Jijakli MH (2011) Effect of temperature and water activity on spore germination and mycelial growth of three fungal biocontrol agents against water hyacinth (Eichhornia crassipes). J Appl Microbiol 110:521–528
Dai DQ, Wijayawardene NN, Bhat DJ et al (2014) Pustulomyces gen. nov. accommodated in Diaporthaceae, Diaporthales, as revealed by morphology and molecular analyses. Cryptogam Mycol 35:63–72
Dai DQ, Phookamsak R, Wijayawardene NN et al (2017) Bambusicolous fungi. Fungal Divers 82:1–105
Dayarathne MC, Jones EBG, Maharachchikumbura SSN et al (2020) Morpho-molecular characterization of microfungi associated with marine based habitats. Mycosphere 11:1–188
de Almeida DAC, Gusmão LFP, Miller AN (2014) A new genus and three new species of hysteriaceous ascomycetes from the semiarid region of Brazil. Phytotaxa 176:298–308
de Gruyter J (2002) Contributions towards a monograph of Phoma (Coelomycetes)—IX Section Macrospora. Persoonia 18:85–102
de Gruyter J, Aveskamp MM, Woudenberg JHC et al (2009) Molecular phylogeny of Phoma and allied anamorph genera: towards a reclassification of the Phoma complex. Mycol Res 113:508–519
de Gruyter J, Woudenberg JHC, Aveskamp MM et al (2010) Systematic reappraisal of species in Phoma section Paraphoma, Pyrenochaeta and Pleurophoma. Mycologia 102:1066–1081
de Gruyter J, Woudenberg JHC, Aveskamp MM et al (2013) Redisposition of phoma-like anamorphs in Pleosporales. Stud Mycol 75:1–36
de Hoog GS, Guarro J, Gene J et al (2000) Atlas of Clinical Fungi. Centraalbureau voor Schimmelcultures, 2nd edn, Utrecht, pp 1–1160
De Notaris G (1844) Osservazione su alcuni generi e specie della tribu dei Pirenomiceti sferiacei G. Bot Ital 2:38–55
den Breeÿen A, Groenewald JZ, Verkley GJ, Crous PW (2006) Morphological and molecular characterisation of Mycosphaerellaceae associated with the invasive weed, Chromolaena odorata. Fungal Divers 23:89–110
Devadatha B, Sarma VV, Wanasinghe DN et al (2017) Introducing the new Indian mangrove species, Vaginatispora microarmatispora (Lophiostomataceae) based on morphology and multigene phylogenetic analysis. Phytotaxa 329:139–149
Devadatha B, Sarma VV, Jeewon R et al (2018) Thyridariella, a novel marine fungal genus from India: morphological characterization and phylogeny inferred from multigene DNA sequence analyses. Mycol Progress 17:791–804
Dissanayake AJ, Camporesi E, Hyde KD et al (2016) Dothiorella species associated with woody hosts in Italy. Mycosphere 7:51–63
Dixon LJ, Schlub RL, Pernezny K, Datnoff LE (2009) Host specialization and phylogenetic diversity of Corynespora cassiicola. Phytopathology 99:1015–1027
Doilom M, Liu JK, Jaklitsch WM et al (2013) An outline of the family Cucurbitariaceae. Sydowia 65:167–192
Doilom M, Shuttleworth LA, Roux J et al (2015) Botryosphaeriaceae associated with Tectona grandis (teak) in Northern Thailand. Phytotaxa 233:1–26
Doilom M, Dissanayake AJ, Wanasinghe DN et al (2017) Microfungi on Tectona grandis (teak) in Northern Thailand. Fungal Divers 82:107–182
Dou ZP, Lu M, Wu JR et al (2017) A new species and interesting records of Aplosporella from China. Sydowia 69:1–7
du Plessis IL, Druzhinina IS, Atanasova L et al (2018) The diversity of Trichoderma species from soil in South Africa, with five new additions. Mycologia 110:559–583
Du Z, Fan XL, Yang Q et al (2017) Aplosporella ginkgonis (Aplosporellaceae, Botryosphaeriales), a new species isolated from Ginkgo biloba in China. Mycosphere 8:1246–1252
Ekanayaka AH, Dissanayake AJ, Jayasiri SC et al (2016) Aplosporella thailandica; a novel species revealing the sexual-asexual connection in Aplosporellaceae (Botryosphaeriales). Mycosphere 7:440–447
Ekanayaka AH, Ariyawansa HA, Hyde KD et al (2017) DISCOMYCETES: the apothecial representatives of the phylum Ascomycota. Fungal Divers 87:237–298
El-Desoukey RMA (2018) Phytochemical and antimicrobial activity of Acacia Ehrenbergiana hayne (Salam) as a grazing herb against some animal pathogens. Adv Anim Vet Sci 6:246–251
Ellis MB (1965) Dematiaceous Hyphomycetes. VI. Mycol Pap 103:1–46
Eriksson OE (2006) Outline of Ascomycota. Myconet 12:1–88
Eriksson OE, Hawksworth DL (1986) An alphabetical list of the generic names of ascomycetes. CAB Int Mycol Inst, Wallingford
Esperschütz J, Welzl G, Schreiner K et al (2011) Incorporation of carbon from decomposing litter of two pioneer plant species into microbial communities of the detritusphere. FEMS Microbiol Lett 320:48–55
Esperschütz J, Zimmermann C, Dümig A et al (2013) Dynamics of microbial communities during decomposition of litter from pioneering plants in initial soil ecosystems. Biogeosciences 10:5115–5124
Esuruoso OF (1971) Seed-borne fungi of the Siam weed, Eupatorium odoratum in Nigeria. PANS Pest Artic News Summ 17:458–460
Ezard THG, Aze T, Pearson PN, Purvis A (2011) Interplay between changing climate and species’ ecology drives macroevolutionary dynamics. Science 332:349–351
Ezenyi IC, Salawu OA, Kulkarni R, Emeje M (2014) Antiplasmodial activity-aided isolation and identification of quercetin-4’-methyl ether in Chromolaena odorata leaf fraction with high activity against chloroquine-resistant Plasmodium falciparum. Parasitol Res 113:4415–4422
Fajola AO (1978) Cultural studies in Cercospora taxonomy: I. Interrelationships between some species from Nigeria. Nova Hedwigia 29:912–921
Fan XL, Yang Q, Cao B et al (2015) New record of Aplosporella javeedii on five hosts in China based on multi-gene analysis and morphology. Mycotaxon 130:749–756
Farr DF, Rossman AY (2020) Fungal databases, U.S. National Fungus Collections, ARS, USDA. https://nt.ars-grin.gov/fungaldatabases/. Accessed 17 March 2020
Feng Y, Zhang S-N, Liu Z-Y (2019) Tremateia murispora sp. nov. (Didymosphaeriaceae, Pleosporales) from Guizhou, China. Phytotaxa 416:79–87
Fourtouni A, Manetas Y, Christias C (1998) Effects of UV-B radiation on growth, pigmentation, and spore production in the phytopathogenic fungus Alternaria solani. Can J Bot 76:2093–2099
Fries EM (1822) Systema. Mycologicum 2:1–275
Fróhlich J, Hyde KD, Petrini O (2000) Endophytic fungi associated with palms. Mycol Res 104:1202–1212
Gallegos ML, Cummins GB (1981) Uredinales (royas) de Mexico, vol 2. Instituto Nacional de Investigaciones Agricoles, Culiacan
Gao Y, Liu F, Duan W et al (2017) Diaporthe is paraphyletic. IMA Fungus 8:153–187
Gäumann EA (1949) Die Pilze, Grundzüge ihrer Entwicklungsgeschichte und Morphologie. Birkhäuser, Basel
Gautier L (1992) Taxonomy and distribution of a tropical weed, Chromolaena odorata (L.) R. King and H. Robinson. Candollea 47:645–662
Giller KE, Witter E, Mcgrath SP (1998) Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biol Biochem 30:1389–1414
Glez-Peña D, Gómez-Blanco D, Reboiro-Jato M et al (2010) ALTER: program-oriented conversion of DNA and protein alignments. Nucleic Acids Res 38:W14–W18
Goodall JM, Erasmus DJ (1996) Review of the status and integrated control of the invasive alien weed, Chromolaena odorata in South Africa. Agric Ecosyst Environ 56:151–164
Gottlieb D (1950) The physiology of spore germination in fungi. Bot Rev 16:229–257
Govindu HC, Thirumalachar MJ, Nag Raj TR (1970) Notes on some Indian Cercosporae—XII. Sydowia 24:297–301
Guatimosim E, Schwartsburd PB, Barreto RW, Crous PW (2016) Novel fungi from an ancient niche: cercosporoid and related sexual morphs on ferns. Persoonia 37:106–141
Gueidan C, Hill DJ, Miadlikowska J, Lutzoni F (2015) 4 Pezizomycotina: Lecanoromycetes. In: McLaughlin DJ, Spatafora JW (eds) Systematics and evolution: part B. Springer, Berlin, pp 89–120
Guo Yl (1999a) Fungal flora of tropical Guangxi, China: hyphomycetes I. Mycotaxon 72:349–358
Guo Yl (1999b) Imperfect fungi in the tropical areas of China II. Some species of Pseudocercospora from Guangdong province. Mycosystema 18:130–134
Guo YL, Liu XJ (2003) Flora Fungorum Sinicorum. Mycovellosiella, Passalora, Phaeoramularia, vol 20. Science Press, Beijing, 189 pp
Guo LD, Hyde KD, Liew ECY (2000) Identification of endophytic fungi from Livistona chinensis based on morphology and rDNA sequences. New Phytol 147:617–630
Guo LD, Hyde KD, Liew ECY (2001) Detection and taxonomic placement of endophytic fungi within frond tissues of Livistona chinensis based on rdna sequences. Mol Phylogenet Evol 20:1–13
Guterres DC, Galvão-Elias S, de Souza BCP et al (2018) Taxonomy, phylogeny, and divergence time estimation for Apiosphaeria guaranitica, a Neotropical parasite on bignoniaceous hosts. Mycologia 110:526–545
Hanh TTH, Hang DTT, Van Minh C, Dat NT (2011) Anti-inflammatory effects of fatty acids isolated from Chromolaena odorata. Asian Pac J Trop Med 4:760–763
Hanphakphoom S, Krajangsang S (2016) Antimicrobial activity of Chromolaena odorata extracts against bacterial human skin infections. Mod Appl Sci 10:159–171
Hansford CG (1949) Tropical fungi—III. New species and revisions. Proc Linn Soc Lond 160:116–153
Harman GE, Kubicek CP (1998) Trichoderma and gliocladium, vol 2. In: Enzymes, biological control and commercial applications. Taylor and Francis, London
Harman GE, Howell CR, Viterbo A et al (2004) Trichoderma species—opportunistic, avirulent plant symbionts. Nat Rev Microbiol 2:43–56
Hashimoto A, Hirayama K, Takahashi H et al (2018) Resolving the Lophiostoma bipolare complex: generic delimitations within Lophiostomataceae. Stud Mycol 90:161–189
Haugland RA, Heckman JL (1998) Identification of putative sequence specific PCR primers for detection of the toxigenic fungal species Stachybotrys chartarum. Mol Cell Probes 12:387–396
Hawksworth DL, Eriksson OE (1986) The names of accepted orders of ascomycetes. Syst Ascomycetum 5:175–184
Hawksworth DL, Kirk PM, Sutton BC et al (1995) Ainsworth & Bisby’s dictionary of the fungi, vol 8. CABI, Wallingford
Heneghan L, Fatemi F, Umek L et al (2006) The invasive shrub European buckthorn (Rhamnus cathartica, L.) alters soil properties in Midwestern U.S. woodlands. Appl Soil Ecol 32:142–148
Hernández-Restrepo M, Schumacher RK, Wingfield MJ et al (2016) Fungal systematics and evolution: FUSE 2. Sydowia 68:193–230
Hernández-Restrepo M, Bezerra JDP, Tan YP et al (2019) Re-evaluation of Mycoleptodiscus species and morphologically similar fungi. Persoonia 42:205–227
Holm LG, Plucknett DL, Pancho JV, Herberger PD (1977) The world’s worst weeds: distribution and biology. University Press of Hawaii, Honolulu
Hongsanan S, Hyde KD, Bahkali AH et al (2015) Fungal biodiversity profiles 11–20. Cryptogam Mycol 36:355–380
Hongsanan S, Maharachchikumbura SSN, Hyde KD et al (2017) An updated phylogeny of Sordariomycetes based on phylogenetic and molecular clock evidence. Fungal Divers 84:25–41
Hosagoudar VB, Mathew S (2000) A preliminary report on the mycoflora of the Andaman & Nicobar Islands, India. J Econ Taxon Bot 24:631–640
Huang WY, Cai YZ, Surveswaran S et al (2009) Molecular phylogenetic identification of endophytic fungi isolated from three Artemisia species. Fungal Divers 36:69–88
Huang W, Long C, Lam E (2018) Roles of plant-associated microbiota in Traditional Herbal Medicine. Trends Plant Sci 23:559–562
Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754–755
Hyde KD, Goh TK (2003) Adaptations for dispersal in filamentous freshwater fungi. Fungal Divers Res Ser 10:231–258
Hyde KD, Jones EBG (1988) Marine mangrove fungi. Mar Ecol 9:15–33
Hyde KD, Fröhlich J, Taylor JE (1998) Fungi from palms. XXXVI. Reflections on unitunicate ascomycetes with apiospores. Sydowia 50:21–80
Hyde KD, Jones EBG, Liu JK et al (2013) Families of Dothideomycetes. Fungal Divers 63:1–313
Hyde KD, Fryar S, Tian Q et al (2016a) Lignicolous freshwater fungi along a north–south latitudinal gradient in the Asian/Australian region; can we predict the impact of global warming on biodiversity and function? Fungal Ecol 19:190–200
Hyde KD, Hongsanan S, Jeewon R et al (2016b) Fungal diversity notes 367–490: taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers 80:1–270
Hyde KD, Maharachchikumbura SSN, Hongsanan S et al (2017a) The ranking of fungi: a tribute to David L. Hawksworth on his 70th birthday. Fungal Divers 84:1–23
Hyde KD, Norphanphoun C, Abreu VP et al (2017b) Fungal diversity notes 603–708: taxonomic and phylogenetic notes on genera and species. Fungal Divers 87:1–235
Hyde KD, Chaiwan N, Norphanphoun C et al (2018a) Mycosphere notes 169–224. Mycosphere 9:271–430
Hyde KD, Norphanphoun C, Chen J et al (2018b) Thailand’s amazing diversity: up to 96% of fungi in northern Thailand may be novel. Fungal Divers 93:215–239
Hyde KD, Tennakoon DS, Jeewon R et al (2019a) Fungal diversity notes 1036–1150: taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Divers 96:1–242
Hyde KD, Xu J, Rapior S et al (2019b) The amazing potential of fungi: 50 ways we can exploit fungi industrially. Fungal Divers 97:1–136
Hyde KD, Norphanphoun C, Maharachchikumbura SSN et al (2020) Refined families of Sordariomycetes. Mycosphere 11:305–1059
Ikhajiagbe B, Akindolor A (2016) Comparative effects of pretreatment of stem cuttings of Chromolaena odorata (Siam weed) with sodium azide and hydroxylamide on the survival and phyoremediative performance in an oil-polluted soil. Niger J Biotechnol 31:27–39
Jaklitsch WM (2009) European species of Hypocrea Part I. The green-spored species. Stud Mycol 63:1–91
Jaklitsch WM, Voglmayr H (2016) Hidden diversity in Thyridaria and a new circumscription of the Thyridariaceae. Stud Mycol 85:35–64
Jaklitsch WM, Gardiennet A, Voglmayr H (2016) Resolution of morphology-based taxonomic delusions: Acrocordiella, Basiseptospora, Blogiascospora, Clypeosphaeria, Hymenopleella, Lepteutypa, Pseudapiospora, Requienella, Seiridium and Strickeria. Persoonia 37:82–105
Jami F, Slippers B, Wingfield MJ, Gryzenhout M (2012) Five new species of the Botryosphaeriaceae from Acacia karroo in South Africa. Cryptogam Mycol 33:245–266
Jami F, Slippers B, Wingfield MJ et al (2014) Botryosphaeriaceae species overlap on four unrelated, native South African hosts. Fungal Biol 118:168–179
Jayasiri S, Hyde KD, Jones EBG et al (2017) Taxonomy and multigene phylogenetic evaluation of novel species in Boeremia and Epicoccum with new records of Ascochyta and Didymella (Didymellaceae). Mycosphere 8:1080–1101
Jayasiri SC, Hyde KD, Jones EBG et al (2018) Taxonomic novelties of hysteriform Dothideomycetes. Mycosphere 9:803–837
Jayasiri SC, Hyde KD, Jones EBG et al (2019) Diversity, morphology and molecular phylogeny of Dothideomycetes on decaying wild seed pods and fruits. Mycosphere 10:1–186
Jeewon R, Liew ECY, Hyde KD (2003) Molecular systematics of the Amphisphaeriaceae based on cladistic analyses of partial LSU rDNA gene sequences. Mycol Res 107:1392–1402
Jeewon R, Ittoo J, Mahadeb D et al (2013) DNA Based identification and phylogenetic characterisation of endophytic and saprobic fungi from Antidesma madagascariense, a medicinal plant in Mauritius. J Mycol 1–10
Jeffrey C (2007) Introduction with key to tribes. In: Kadereit JW, Jeffrey C (eds) the families and genera of vascular plants, vol 8. Flowering plants. Eudicots. Asterales. Springer, Berlin, pp 61–87
Jia M, Chen L, Xin HL et al (2016) A friendly relationship between endophytic fungi and medicinal plants: a systematic review. Front Microbiol 7:1
Jiang N, Li J, Tian CM (2018) Arthrinium species associated with bamboo and reed plants in China. Fungal Syst Evol 2:1–9
Jiang HB, Hyde KD, Jayawardena RS et al (2019) Taxonomic and phylogenetic characterizations reveal two new species and two new records of Roussoella (Roussoellaceae, Pleosporales) from Yunnan, China. Mycol Progress 18:577–591
Jin HQ, Liu HB, Xie YY et al (2018) Effect of the dark septate endophytic fungus Acrocalymma vagum on heavy metal content in tobacco leaves. Symbiosis 74:89–95
Johari SA, Kiong LS, Mohtar M et al (2012) Efflux inhibitory activity of flavonoids from Chromolaena odorata against selected methicillin-resistant Staphylococcus aureus (MRSA) isolates. Afr J Microbiol Res 6:5631–5635
Johnston A (1960) A supplement to a host list of plant diseases in Malaya. Mycol Pap 77:1–30
Jones EBG (2006) Form and function of fungal spore appendages. Mycoscience 47:167
Jones EBG, Pang KL, Abdel-Wahab MA et al (2019) An online resource for marine fungi. Fungal Divers 96:347–433
Kamal (2010) Cercosporoid fungi of India. Bishen Singh Mahendra Pal Singh, Dehra Dun
Kanase V, Shaikh S (2018) A pharmacognostic and pharmacological review on Chromolaena odorata (Siam weed). Asian J Pharm Clin Res 11:34–38
Kang JC, Hyde KD, Kong RYC (1999) Studies on Amphisphaeriales: the Cainiaceae. Mycol Res 103:1621–1627
Kantarcioğlu AS, Celkan T, Yücel A et al (2009) Fatal Trichoderma harzianum infection in a leukemic pediatric patient. Med Mycol 47:207–215
Karunarathna A, Papizadeh M, Senanayake IC et al (2017) Novel fungal species of Phaeosphaeriaceae with an asexual/sexual morph connection. Mycosphere 8:1818–1834.
Katoh K, Rozewicki J, Yamada KD (2019) MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform 20:1160–1166
Kern FD (1930) Fungi of Santo Domingo—III, Uredinales. Mycologia 22:111–117
Kern FD, Ciferri R, Thurston-Jr HW (1933a) The rust-flora of the Dominican Republic. Ann Mycol 31:1–40
Kern FD, Thurston HW Jr, Whetzel HH (1933b) Annotated index of the rusts of Colombia. Mycologia 25:448–503
Kern FD, Thurston HW Jr, Whetzel HH (1934) Uredinales. Monogr Univ Puerto Rico B 2:262–303
Kigigha LT, Zige DV (2013) Activity of Chromolaena odorata on enteric and superficial etiologic bacterial agents. Am J Res Commun 1:266–276
Kirk PM (1986) New or interesting microfungi. XV. Miscellaneous hyphomycetes from the British Isles. Trans Br Mycol Soc 86:409–428
Kirk PM, Cannon PF, Minter DW, Stalpers JA (2008) Ainsworth & Bisby’s dictionary of the fungi, 10th edn. CABI, Wallingford
Kirschner R, Chen CJ (2007) Foliicolous hyphomycetes from Taiwan. Fungal Divers 26:219–239
Klein D, Eveleigh DE (1998) Ecology of Trichoderma. In: Kubicek CP, Harman GE (eds) Trichoderma and Gliocladium. Taylor & Francis, London, pp 57–74
Köberl M, Schmidt R, Ramadan EM et al (2013) The microbiome of medicinal plants: diversity and importance for plant growth, quality and health. Front Microbiol 4:400
Kodsueb R, Lumyong S, McKenzie EHC et al (2016) Relationships between terrestrial and freshwater lignicolous fungi. Fungal Ecol 19:155–168
Kohlmeyer J, Volkmann-Kohlmeyer B, Eriksson OE (1995) Fungi on Juncus roemerianus. New dictyosporous ascomycetes. Bot Mar 38:165–174
Kolařík M (2018) New taxonomic combinations in endophytic representatives of the genus Nigrograna. Czech Mycol 70:123–126
Kolařík M, Spakowicz DJ, Gazis R et al (2017) Biatriospora (Ascomycota: Pleosporales) is an ecologically diverse genus including facultative marine fungi and endophytes with biotechnological potential. Plant Syst Evol 303:35–50
Konta S, Hongsanan S, Tibpromma S et al (2016) An advance in the endophyte story: Oxydothidaceae fam. nov. with six new species of Oxydothis. Mycosphere 7:1425–1446
Kouamé PBK, Jacques C, Bedi G et al (2013) Phytochemicals isolated from leaves of Chromolaena odorata: impact on viability and clonogenicity of cancer cell lines. Phytother Res 27:835–840
Koutika LS, Rainey HJ (2010) Chromolaena odorata in different ecosystems: weed or fallow plant? Appl Ecol Environ Res 8:131–142
Krug JC (1977) The genus Cainia and a new family, Cainiaceae. Sydowia 30:122–133
Kumar V, Cheewangkoon R, Thambugala KM et al (2019) Rhytidhysteron mangrovei (Hysteriaceae), a new species from mangroves in Phetchaburi Province, Thailand. Phytotaxa 266:250–260
Kutorga E, Hawksworth DL (1997) A re-assessment of the genera referred to the family Patellariaceae (Ascomycota). Systema Ascomycetum 15:1–110
Le Dinh T, Zaw M, Matsumoto M (2019) Diaporthe species complex occurring on Asparagus kiusianus in Japan. J Plant Pathol 101:161–167
Leylaie S, Zafari D (2018) Antiproliferative and antimicrobial activities of secondary metabolites and phylogenetic study of endophytic Trichoderma species from Vinca Plants. Front Microbiol 9:1484
Li D, Yang CS, Haugland RA et al (2003) A new species of Memnoniella. Mycotaxon 85:253–257
Li QR, Tan P, Jiang YL et al (2013) A novel Trichoderma species isolated from soil in Guizhou, T. guizhouense. Mycol Prog 12:167–172
Li BJ, Liu PQ, Jiang Y, Weng QY, Chen QH (2016a) First report of culm rot caused by Arthrinium phaeospermum on Phyllostachys viridis in China. Plant Dis 100:1013
Li JF, Bhat DJ, Phookamsak R et al (2016b) Sporidesmioides thailandica gen. et sp. nov. (Dothideomycetes) from northern Thailand. Mycol Progress 15:1169–1178
Li JF, Phookamsak R, Jeewon R et al (2017) Molecular taxonomy and morphological characterization reveal new species and new host records of Torula species (Torulaceae, Pleosporales). Mycol Progress 16:447–461
Liao C, Peng R, Luo Y et al (2008) Altered ecosystem carbon and nitrogen cycles by plant invasion: a meta-analysis. New Phytol 177:706–714
Liew ECY, Aptroot A, Hyde KD (2000) Phylogenetic significance of the pseudoparaphyses in Loculoascomycete taxonomy. Mol Phylogeny Evol 16:392–402
Lin C, McKenzie EHC, Bhat DJ et al (2016) Stachybotrys-like taxa from karst areas and a checklist of stachybotrys-like species from Thailand. Mycosphere 7:1273–1291
Lindau G (1897a) Hypocreales. In: Englier HA, Prantl KAE (eds) Die Naturlichen Pflanzenfamilien 1. Verlag W, Engelman, pp 343–372
Lindau G (1897b) Hysteriineae. In: Engler & Prantl, Naturliche Pflanzenfamilien. I. Teil, I. Abteilung. 1:265–278
Litzenberger SC, Farr ML, Lip HT (1962) A preliminary list of cambodian plant diseases. USAID Division of Agriculture & Natural Resources, Phnom-Penh
Liu XJ, Guo YL (1988) Studies on the genus Mycovellosiella of China. Mycosystema 1:241–268
Liu XJ, Yl Guo (1998) Flora Fungorum Sinicorum. Pseudocercospora, vol 9. Science Press, Beijing
Liu YJ, Whelen S, Hall BD (1999) Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Mol Biol Evol 16:1799–1808
Liu JK, Phookamsak R, Doilom M et al (2012) Towards a natural classification of Botryosphaeriales. Fungal Divers 57:149–210
Liu JK, Phookamsak R, Dai DQ et al (2014) Roussoellaceae, a new pleosporalean family to accommodate the genera Neoroussoella gen. nov. Roussoella and Roussoellopsis. Phytotaxa 181:1–33
Liu JK, Hyde KD, Jones EBG et al (2015) Fungal diversity notes 1–110: taxonomic and phylogenetic contributions to fungal species. Fungal Divers 72:1–197
Liu JK, Hyde KD, Jeewon R et al (2017) Ranking higher taxa using divergence times: a case study in Dothideomycetes. Fungal Divers 84:75–99
Liu LN, Razaq A, Atri NS et al (2018) Fungal systematics and evolution: FUSE 4. Sydowia 70:211–286
Lombard L, Houbraken J, Decock C et al (2016) Generic hyper-diversity in Stachybotriaceae. Persoonia 36:156–246
Lumbsch HT, Huhndorf SM (2007) Outline of Ascomycota—2007. Myconet 13:1–99
Lumbsch HT, Huhndorf SM (2010a) Myconet volume 14. Part one. Outline of ascomycota—2009. Part two. Notes on ascomycete systematics. Nos. 4751–5113. Fieldiana Life Earth Sci 16:1–65
Lumbsch HT, Huhndorf SM (2010b) Outline of Ascomycota—2009. Fieldiana Life Earth Sci 1:1–60
Luttrell ES (1951) Taxonomy of pyrenomycetes. University of Missouri Studies 24:1–120
Luttrell ES (1955) The ascostromatic ascomycetes. Mycologia 47:511–532
Macdonald IAW (1983) Alien trees, shrubs and creepers invading indigenous vegetation in the Hluhluwe-Umfolozi Game Reserve Complex in Natal. Bothalia 14:949–959
Maharachchikumbura SSN, Hyde KD, Jones EBG et al (2015) Towards a natural classification and backbone tree for Sordariomycetes. Fungal Divers 72:199–301
Maharachchikumbura SSN, Hyde KD, Jones EBG et al (2016) Families of Sordariomycetes. Fungal Divers 79:1–317
Mapook A, Boonmee S, Ariyawansa HA et al (2016a) Taxonomic and phylogenetic placement of Nodulosphaeria. Mycol Prog 15:34
Mapook A, Hyde KD, Dai D-Q et al (2016b) Muyocopronales, ord. nov., (Dothideomycetes, Ascomycota) and a reappraisal of Muyocopron species from northern Thailand. Phytotaxa 265:225–237
Mapook A, Hyde KD, Hongsanan S et al (2016c) Palawaniaceae fam. nov., a new family (Dothideomycetes, Ascomycota) to accommodate Palawania species and their evolutionary time estimates. Mycosphere 7:1732–1745
Mapook A, Macabeo APG, Hyde KD, Thongbai B, Stadler M (2020) Polyketide derivatives from a Dothideomycetes fungus, Pseudopalawania siamensis gen. et sp. nov., (Muyocopronales) with antimicrobial and cytotoxic activities. Biomolecules (Accepted).
Matthews S, Brand K (2004) Africa invaded: the growing danger of invaded alien species. The global Invasive species Programme (GISP) Secretariat. Cape Town, South Africa. www.gisp.org/downloadpubs/gipsAfrica.pdf
Maynard Smith J (1978) The evolution of sex. Cambridge University Press, Cambridge
McFadyen R (1996) Potential distribution of Chromolaena odorata (Siam weed) in Australia, Africa and Oceania. Agric Ecosyst Environ 59:89–96
Meeboon J, Hidayat I, To-anun C (2007) An annotated list of cercosporoid fungi in Northern Thailand. J Agric Technol 3:51–63
Mehl JWM, Slippers B, Roux J, Wingfield MJ (2014) Botryosphaeriaceae associated with die-back of Schizolobium parahyba trees in South Africa and Ecuador. Forest Pathol 44:396–408
Minter DW, Rodríguez-Hernández M, Mena Portales J (2001) Fungi of the Caribbean: an annotated checklist. PDMS Publishing
Mitakakis TZ, O’meara TJ, Tovey ER (2003) The effect of sunlight on allergen release from spores of the fungus Alternaria. Grana 42:43–46
Moore AB (2004) Alien invasive species: impacts on forests and forestry. Forest Health and Biosecurity Working Papers FAO, Rome
Morgan-Jones G (1997) Notes on hyphomycetes. LXXIII. Redescription of Phaeoramularia coalescens, Phaeoramularia eupatorii-odorati and Phaeoramularia pruni. Mycotaxon 61:363–373
Müller E, von Arx JA (1950) Einige aspekte zur systematik pseudosphärialer ascomyceten. Ber Schw Bot Ges 60:329–397
Muniappan R, Reddy GVP, Lai PY (2005) Distribution and biological control of Chromolaena odorata. In: Inderjit A (ed) Invasive plants: ecological and agricultural aspects. Birkhäuser, Basel, pp 223–233
Munk A (1953) The system of the Pyrenomycetes: a contribution to a natural classification of the group Sphacriales sensu Lindau. Dansk Bot Arkiv 15:1–163
Murgia M, Fiamma M, Barac A et al (2018) Biodiversity of fungi in hot desert sands. Microbiol Open 8:e00595
Nag Raj TR (1974) Icones generum coelomycetum VI. Univ Waterloo Biol Ser 13:1–41
Naidoo KK, Coopoosamy RM, Naidoo G (2011) Screening of Chromolaeana odorata (L.) King and Robinson for antibacterial and antifungal properties. Med Plants Res 5:4859–4862
Nannfeldt JA (1932) Studien über die Morphologie und Systematik der nicht-lichenisierten, inoperkulaten Discomyceten. Nova Acta Regiae Soc Sci Uppsaliensis Ser 6:1–368
Nesher I, Barhoom S, Sharon A (2008) Cell cycle and cell death are not necessary for appressorium formation and plant infection in the fungal plant pathogen Colletotrichum gloeosporioides. BMC Biol 6:9
Ngono NA, Ebelle Etame R, Ndifor F et al (2006) Antifungal activity of Chromolaena odorata (L.). King and Robinson (Asteraceae) of Cameroon. Chemotherapy 52:103–106
Nguanhom J, Cheewangkoon R, Groenewald JZ et al (2015) Taxonomy and phylogeny of Cercospora spp. from Northern Thailand. Phytotaxa 233:27–48
Niranjan M, Sarma VV (2018) Twelve new species of Ascomycetous fungi from Andaman Islands, India. Kavaka 50:84–97
Nitschke T (1870) Pyrenomycetes Germanici 2, 161–320. Eduard Trewendt, Wroclaw
Norphanphoun C, Jeewon R, Mckenzie EHC et al (2017) Taxonomic position of Melomastia italica sp. nov. and phylogenetic reappraisal of Dyfrolomycetales. Cryptogam. Mycology 38:507–526
Nylander JAA (2004) MrModeltest 2.0. Program distributed by the author. Evolutionary Biology Centre, Uppsala University
Ohm RA, Feau N, Henrissat B et al (2012) Diverse Lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen dothideomycetes fungi. PLoS Pathog 8:e1003037
Okoronkwo A, Aiyesanmi A, Odiyi A et al (2014) Bioaccumulation of cadmium in Siam (Chromolaena odorata) and Node (Synedrella nodiflora) weeds: impact of ethylene diamine tetraacetic acid (EDTA) on uptake. Environ Nat Resour Res 4:p39
Onkaramurthy M, Veerapur VP, Thippeswamy BS et al (2013) Anti-diabetic and anti-cataract effects of Chromolaena odorata Linn., in streptozotocin-induced diabetic rats. J Ethnopharmacol 145:363–372
Osman M, Valadon LRG (1981) Effect of light (especially near-U.V.) on spore germination and ultrastructure of Verticillium agaricinum. Trans Br Mycol Soc 77:187–189
Pandith H, Zhang X, Liggett J et al (2013a) Hemostatic and wound healing properties of Chromolaena odorata leaf extract. ISRN Dermatol 2013:168269
Pandith H, Zhang X, Thongpraditchote S et al (2013b) Effect of Siam weed extract and its bioactive component scutellarein tetramethyl ether on anti-inflammatory activity through NF-κB pathway. J Ethnopharmacol 147:434–441
Pang KL, Hyde KD, Alias SA et al (2013) Dyfrolomycetaceae, a new family in the Dothideomycetes, Ascomycota. Cryptogam. Mycology 34:223–232
Papizadeh M, Soudi MR, Amini L et al (2017) Pyrenochaetopsis tabarestanensis (Cucurbitariaceae, Pleosporales), a new species isolated from rice farms in north Iran. Phytotaxa 297:15–28
Pardo Cardona VM (1998) Distribucion de las especies colombianas de Uredinales segun los grupos taxonomicos de sus hospederos. Rev Fac Nal Agric Medellin 51:285–319
Pem D, Gafforov Y, Jeewon R et al (2018) Multigene phylogeny coupled with morphological characterization reveal two new species of Holmiella and taxonomic insights within Patellariaceae. Cryptogam. Mycology 39(2):193–209
Peregrine WTH, Ahmad KB (1982) Brunei: A first annotated list of plant diseases and associated organisms. Phytopathol Pap 27:1–87
Persoon CH (1794) Neuer Versuch einer systematischen Einteilung der Schwämme. N Mag Die Bot Ihrem Ganzen Umfange 1: 63–128
Phengsintham P, Chukeatirote E, Abdelsalam KA, Hyde KD, Braun U (2010) Cercospora and allied genera from Laos 2. Cryptogam. Mycology 31:161–181
Phengsintham P, Braun U, McKenzie EHC, Chukeatirote E, Cai L, Hyde KD (2013) Monograph of Cercosporoid fungi from Thailand. Pl Pathol Quarantine 3:67–138
Phillips AJL, Alves A, Abdollahzadeh J et al (2013) The Botryosphaeriaceae: genera and species known from culture. Stud Mycol 76:51–167
Phillips AJL, Hyde KD, Alves A, Liu JK (2019) Families in Botryosphaeriales: a phylogenetic, morphological and evolutionary perspective. Fungal Divers 94:1–22
Phookamsak R, Liu JK, McKenzie EHC et al (2014) Revision of Phaeosphaeriaceae. Fungal Divers 68:159–238
Phookamsak R, Hyde KD, Jeewon R et al (2019) Fungal diversity notes 929–1035: taxonomic and phylogenetic contributions on genera and species of fungi. Fungal Divers 95:1–273
Phukhamsakda C, Ariyawansa HA, Phillips AJL et al (2016) Additions to Sporormiaceae: Introducing two novel genera, Sparticola and Forliomyces, from Spartium. Cryptogam. Mycology 37:75–97
Piepenbring M (2006) Checklist of fungi in Panama. Preliminary version. Puente Biol 1:1–190
Pintos Á, Alvarado P, Planas J, Jarling R (2019) Six new species of Arthrinium from Europe and notes about A. caricicola and other species found in Carex spp. hosts. MycoKeys 49:15–48
Pisutthanan N, Liawruangrath B, Liawruangrath S et al (2005) Constituents of the essential oil from aerial parts of Chromolaena odorata from Thailand. Nat Prod Res 20:636–640
Pitt W, Úrbez-Torres JR, Trouillas FP (2014) Munkovalsaria donacina from grapevines and Desert Ash in Australia. Mycosphere 5:656–661
Promputtha I, Lumyong S, Dhanasekaran V et al (2007) A phylogenetic evaluation of whether endophytes become saprotrophs at host senescence. Microb Ecol 53:579–590
Promputtha I, Hyde KD, McKenzie EHC et al (2010) Can leaf degrading enzymes provide evidence that endophytic fungi becoming saprobes? Fungal Divers 41:89–99
Puckdeedindan P (1966) A supplementary host list of plant diseases in Thailand. Technical Bulletin Department of Agriculture, Bangkok 7, pp 1–23
Purahong W, Hyde KD (2011) Effects of fungal endophytes on grass and non-grass litter decomposition rates. Fungal Divers 47:1–7
Qin WT, Zhuang WY (2017) Seven new species of Trichoderma (Hypocreales) in the Harzianum and Strictipile clades. Phytotaxa 305:121–139
Qin RM, Zheng YL, Valiente-Banuet A et al (2013) The evolution of increased competitive ability, innate competitive advantages, and novel biochemical weapons act in concert for a tropical invader. New Phytol 197:979–988
Quaedvlieg W, Verkley GJM, Shin HD, Barreto RW, Alfenas AC, Swart WJ, Groenewald JZ, Crous PW (2013) Sizing up Septoria. Stud Mycol 75:307–390
Rabenhorst (1857) Ein Notizblatt für kryptogamische Studien. Hedwigia 1:116
Rai MK (1989) Mycosis in man due to Arthrinium phaeospermum var. indicum. First case report. Mycoses 32:472–475
Rambaut A (2009) FigTree v1.4: tree figure drawing tool. http://tree.bio.ed.ac.uk/software/figtree/
Rambaut A, Suchard MA, Drummond AJ (2014) Tracer v 1.6, available from: http://tree.bio.ed.ac.uk/software/tracer/
Rani CA, Mohammed R (2012) Ethnobotanical study of wound healing plants among the folk medicinal practitioners of several districts in Bangladesh. Am Eur J Sustain Agric 6:371–377
Rannala B, Yang Z (1996) Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. J Mol Evol 43:304–311
Rao VG (1969) Fungi on Citrus from India. Sydowia 23:215–224
Rehner S (2001) Primers for elongation factor 1-α (EF1-α). http://ocid.NACSE.ORG/research/deephyphae/EF1primer.pdf
Richardson MJ (1990) An annotated list of seed-borne diseases, 4th edn. International Seed Testing Association, Zurich
Rose S (1997) Influence of suburban edges on invasion of Pittosporum undulatum into the bush land of northern Sydney, Australia. Aust J Ecol 22:89–99
Roux J, Wingfield MJ, Morris MJ (1997) Botryosphaeria dothidea, a pathogen of Acacia mearnsii in South Africa. S Afr J Sci 93:xii
Roy BA (2001) Patterns of association between crucifers and their flower-mimic pathogens: host jumps are more common than coevolution or cospeciation. Evolution 55:41–53
Ruangdech T, Wongphatcharachai M, Staley C et al (2017) Influence of heavy metals on rhizosphere microbial communities of Siam weed (Chromolaena odorata L.) using a 16S rRNA gene amplicon sequencing approach. Agric Nat Resour 51:137–141
Rubini MR, Silva-Ribeiro RT, Pomella AW et al (2005) Diversity of endophytic fungal community of cacao (Theobroma cacao L.) and biological control of Crinipellis perniciosa, causal agent of witches’ broom disease. Int J Biol Sci 1:24–33
Ruibal C, Gueidan C, Selbmann L et al (2009) Phylogeny of rock-inhabiting fungi related to Dothideomycetes. Stud Mycol 64:123–133
Russo VM (1985) Leaf spot disease of Chromolaena odorata caused by Septoria sp. in Guam. Pl Dis 69:1101
Saccardo PA (1880) Conspectus genera fungorum Italiae inferiorum nempe ad Sphaeropsideas, Melanconieas et Hyphomyceteas pertinentium systemate sporologico dispositorum. Michelia 2:1–38
Saccardo PA (1882) Sylloge Fungorum omnium hucusque cognitorum 1:715
Saccardo PA (1883) Sylloge Fungorum omnium hucusque cognitorum 2:658–661
Samarakoon MC, Hyde KD, Hongsanan S et al (2019) Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations. Fungal Divers 96:285–346
Samuels GJ (2006) Trichoderma: systematics, the sexual state, and ecology. Phytopathology 96:195–206
Sandoval-Denis M, Sutton DA, Cano-Lira JF et al (2014) Phylogeny of the clinically relevant species of the emerging fungus Trichoderma and their antifungal susceptibilities. J Clin Microbiol 52:2112–2125
Sawada K (1931) List of fungi found in Formosa. Taiwan Central Institute, Taipei
Schoch CL, Shoemaker RA, Seifert KA et al (2006) A multigene phylogeny of the Dothideomycetes using four nuclear loci. Mycologia 98:1041–1052
Schoch CL, Crous PW, Groenewald J et al (2009) A class wide phylogenetic assessment of Dothideomycetes. Stud Mycol 64:1–15
Scott LJ, Lange CL, Graham GC, Yeates DK (1998) Genetic diversity and origin of siam weed (Chromolaena odorata) in Australia. Weed Technol 12:27–31
Senanayake IC, Maharachchikumbura SSN, Hyde KD et al (2015) Towards unraveling relationships in Xylariomycetidae (Sordariomycetes). Fungal Divers 73:73–144
Senanayake IC, Crous PW, Groenewald JZ et al (2017) Families of Diaporthales based on morphological and phylogenetic evidence. Stud Mycol 86:217–296
Senanayake IC, Jeewon R, Chomnunti P et al (2018) Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology. Fungal Divers 93:241–443
Senwanna C, Hongsanan S, Phookamsak R et al (2019) Muyocopron heveae sp. nov. and M. dipterocarpi appears to have host-jumped to rubber. Mycol Progress 18:741–752
Setter MJ, Campbell SD (2002) Impact of foliar herbicides on germination and viability of Siam weed (Chromolaena odorata) seeds located on plants at the time of application. Plant Prot Q 17:155–157
Shao X, Li Q, Lin L, He T (2018) On the origin and genetic variability of the two invasive biotypes of Chromolaena odorata. Biol Invasions 20:2033–2046
Sharma R, Kulkarni G, Sonawane MS (2017) Alanomyces, a new genus of Aplosporellaceae based on four loci phylogeny. Phytotaxa 297:168–175
Shipunov A, Newcombe G, Raghavendra AKH, Anderson CL (2008) Hidden diversity of endophytic fungi in an invasive plant. Am J Bot 95:1096–1108
Silvestro D, Michalak I (2010) raxmlGUI: a graphical front-end for RAxML Program and documentation. http://www.sourceforge.com
Sirinthipaporn A, Jiraungkoorskul W (2017) Wound healing property review of Siam weed, Chromolaena odorata. Pharmacogn Rev 11:35
Slippers B, Wingfield MJ (2007) Botryosphaeriaceae as endophytes and latent pathogens of woody plants: diversity, ecology and impact. Fungal Biol Rev 21:90–106
Slippers B, Boissin E, Phillips AJL et al (2013) Phylogenetic lineages in the Botryosphaeriales: a systematic and evolutionary framework. Stud Mycol 76:31–49
Slippers B, Roux J, Wingfield MJ et al (2014) Confronting the constraints of morphological taxonomy in the Botryosphaeriales. Persoonia Mol Phylogeny Evol Fungi 33:155–168
Smith GJD, Liew ECY, Hyde KD (2003) The Xylariales: a monophyletic order containing 7 families. Fungal Divers 13:185–218
Soleimani P, Soleimani MJ, Hosseini S (2018) Phylogenetic relationship and evolution of Neodidymelliopsis isolates collected from Iran. Mycosphere 9:1235–1255
Soto-Medina EA, Lücking R (2017) A new species of Rhytidhysteron (Ascomycota: Patellariaceae) from Colombia, with a provisional working key to known species in the world. Rev Acad Colomb Cienc Exactas Físicas Nat 41:59
Spegazzini C (1880) Fungi argentini. Pugillus tertius (Continuacion). Anal Soc Cient Argent 10:145–168
Spegazzini C (1881a) Fungi argentini additis nonnullis brasiliensibus montevideensibusque. Pugillus quartus (Continuacion). Anal Soc Cient Argent 12:174–189
Spegazzini C (1881b) Fungi argentini additis nonnullis brasiliensibus montevideensibusque. Pugillus quartus (Continuacion). Anal Soc Cient Argent 12:97–117
Stamatakis A, Hoover P, Rougemont J (2008) A rapid bootstrap algo- rithm for the RAxML web-servers. Syst Biol 75:758–771
Stanley MC, Ifeanyi OE, Nwakaego CC, Esther IO (2014) Antimicrobial effects of Chromolaena odorata on some human pathogens. Int J Curr Microbiol Appl Sci 3:1006–1012
Stevenson JA (1975) Fungi of Puerto Rico and the American Virgin Islands. Contr Reed Herb 23:743
Strobel G (2018) The emergence of endophytic microbes and their biological promise. J Fungi 4:57
Sturm J (1829) Deutschlands flora, Abt. III. Die Pilze Deutschlands 2:1–136
Su H, Hyde KD, Maharachchikumbura SSN et al (2016) The families Distoseptisporaceae fam. nov., Kirschsteiniotheliaceae, Sporormiaceae and Torulaceae, with new species from freshwater in Yunnan Province, China. Fungal Divers 80:375–409
Su XJ, Luo ZL, Jeewon R et al (2018) Morphology and multigene phylogeny reveal new genus and species of Torulaceae from freshwater habitats in northwestern Yunnan, China. Mycol Progress 17:531–545
Suksamrarn A, Chotipong A, Suavansri T et al (2004) Antimycobacterial activity and cytotoxicity of flavonoids from the flowers of Chromolaena odorata. Arch Pharm Res 27:507–511
Sun X, Guo L-D, Hyde KD (2011) Community composition of endophytic fungi in Acer truncatum and their role in decomposition. Fungal Divers 47:85–95
Sutton BC (1968) The appressoria of Colletotrichum graminicola and C. falcatum. Can J Bot 46:873–876
Tai FL (1979) Sylloge Fungorum Sinicorum. Science Press, Peking
Tamura K, Peterson D, Peterson N et al (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739
Tamura K, Stecher G, Peterson D et al (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–2729
Tanaka K, Hirayama K, Yonezawa H et al (2015) Revision of the Massarineae (Pleosporales, Dothideomycetes). Stud Mycol 82:75–136
Tanhan P, Kruatrachue M, Pokethitiyook P, Chaiyarat R (2007) Uptake and accumulation of cadmium, lead and zinc by Siam weed [Chromolaena odorata (L.) King & Robinson]. Chemosphere 68:323–329
Taylor JE, Hyde KD (2003) Microfungi of tropical and temperate palms. Fungal Divers Res Ser 12:1–459
Tennakoon DS, Hyde KD, Wanasinghe DN et al (2016) Taxonomy and phylogenetic appraisal of Montagnula jonesii sp. nov. (Didymosphaeriaceae, Pleosporales). Mycosphere 7:1346–1356
Tennakoon DS, Kuo CH, Jeewon R et al (2018) Saprobic Lophiostomataceae (Dothideomycetes): Pseudolophiostoma mangiferae sp. nov. and Neovaginatispora fuckelii, a new record from Mangifera indica. Phytotaxa 364:157–171
Thambugala KM, Hyde KD (2018) Additions to the genus Massariothea in Diaporthaceae. Mycol Progress 17:1139–1147
Thambugala KM, Hyde KD, Tanaka K et al (2015) Towards a natural classification and backbone tree for Lophiostomataceae, Floricolaceae, and Amorosiaceae fam. nov. Fungal Divers 74:199–266
Thambugala KM, Hyde KD, Eungwanichayapant PD et al (2016) Additions to the genus Rhytidhysteron in Hysteriaceae. Cryptogam. Mycology 37:99–116
Thambugala KM, Daranagama DA, Phillips AJL et al (2017a) Microfungi on Tamarix. Fungal Divers 82:239–306
Thambugala KM, Wanasinghe DN, Phillips AJL et al (2017b) Mycosphere notes 1–50: Grass (Poaceae) inhabiting Dothideomycetes. Mycosphere 8:697–796
Thaung MM (1984) Some fungi of Cercospora complex from Burma. Mycotaxon 19:425–452
Theissen F, Sydow H (1918) Vorentwürfe zu den Pseudosphaeriales. Ann Mycol 16:1–34
Thomas B, Arumugam R, Veerasamy A, Ramamoorthy S (2014) Ethnomedicinal plants used for the treatment of cuts and wounds by Kuruma tribes, Wayanadu districts of Kerala, India. Asian Pac J Trop Biomed 4:88–91
Thompson SM, Tan YP, Young AJ et al (2011) Stem cankers on sunflower (Helianthus annuus) in Australia reveal a complex of pathogenic Diaporthe (Phomopsis) species. Persoonia 27:80–89
Thompson SM, Tan YP, Shivas RG et al (2015) Green and brown bridges between weeds and crops reveal novel Diaporthe species in Australia. Persoonia 35:39–49
Tibpromma S, McKenzie EHC, Karunarathna SC et al (2016) Muyocopron garethjonesii sp. nov. (Muyocopronales, Dothideomycetes) on Pandanus sp. Mycosphere 7:1480–1489
Tibpromma S, Hyde KD, Jeewon R et al (2017) Fungal diversity notes 491–602: taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers 83:1–261
Tibpromma S, Hyde KD, McKenzie EHC et al (2018) Fungal diversity notes 840–928: micro-fungi associated with Pandanaceae. Fungal Divers 93:1–160
Trakunyingcharoen T, Cheewangkoon R, To-anun C et al (2014a) Botryosphaeriaceae associated with diseases of mango (Mangifera indica). Australas Plant Pathol 43:425–438
Trakunyingcharoen T, Lombard L, Groenewald JZ et al (2014b) Mycoparasitic species of Sphaerellopsis, and allied lichenicolous and other genera. IMA Fungus 5:391–414
Trakunyingcharoen T, Lombard L, Groenewald JZ et al (2015) Caulicolous Botryosphaeriales from Thailand. Persoonia 34:87–99
Trognitz F, Hackl E, Widhalm S, Sessitsch A (2016) The role of plant-microbiome interactions in weed establishment and control. FEMS Microbiol Ecol 92:1–15
Truter M, Přikrylová I, Weyl OLF, Smit NJ (2017) Co-introduction of ancyrocephalid monogeneans on their invasive host, the largemouth bass, Micropterus salmoides (Lacepéde, 1802) in South Africa. Int J Parasitol Parasit Wildl 6:420–429
Tůma I, Holub P, Fiala K (2009) Soil nutrient heterogeneity and competitive ability of three grass species (Festuca ovina, Arrhenatherum elatius and Calamagrostis epigejos) in experimental conditions. Biologia 64:694–704
Udayanga D, Liu X, McKenzie EHC et al (2011) The genus Phomopsis: biology, applications, species concepts and names of common phytopathogens. Fungal Divers 50:189
Udayanga D, Castlebury LA, Rossman AY et al (2015) The Diaporthe sojae species complex: phylogenetic re-assessment of pathogens associated with soybean, cucurbits and other field crops. Fungal Biol 119:383–407
Urtiaga R (1986) Indice de enfermedades en plantas de Venezuela y Cuba. Impresos en Impresos Nuevo Siglo. S.R.L., Barquisimeto, Venezuela
Urtiaga R (2004) Host index of plant diseases and disorders from Venezuela—Addendum. Lara, Venezuela
Urtiaga R, Braun U (2013) New species and new records of cercosporoid hyphomycetes from Cuba and Venezuela (Part 2). Mycosphere 4:174–214
Váczy KZ, Németh MZ, Csikós A et al (2018) Dothiorella omnivora isolated from grapevine with trunk disease symptoms in Hungary. Eur J Plant Pathol 150:817–824
Vaisakh MN, Pandey A (2012) The invasive weed with healing properties: a review on Chromolaena odorata. Int J Pharm Sci Res 3:80–83
Valenzuela-Lopez N, Sutton DA, Cano-Lira JF et al (2017) Coelomycetous fungi in the clinical setting: morphological convergence and cryptic diversity. J Clin Microbiol 55:552–567
Valenzuela-Lopez N, Cano-Lira JF, Guarro J et al (2018) Coelomycetous Dothideomycetes with emphasis on the families Cucurbitariaceae and Didymellaceae. Stud Mycol 90:1–69
Venugopal P, Junninen K, Linnakoski R et al (2016) Climate and wood quality have decayer-specific effects on fungal wood decomposition. For Ecol Manag 360:341–351
Venugopal P, Junninen K, Edman M, Kouki J (2017) Assemblage composition of fungal wood-decay species has a major influence on how climate and wood quality modify decomposition. FEMS Microbiol Ecol 93:1–8
Verkley GJM, Quaedvlieg W, Shin HD, Crous PW (2013) A new approach to species delimitation in Septoria. Stud Mycol 75:213–305
Videira SIR, Groenewald JZ, Nakashima C et al (2017) Mycosphaerellaceae—chaos or clarity? Stud Mycol 87:257–421
Viegas AP (1961) Indice de Fungos da America do SuI. Instituto Agronomico de Campinas, Campinas
Vijayaraghavan K, Mohamed Ali S, Maruthi R (2013) Studies on phytochemical screening and antioxidant activity of Chromolaena odorata and Annona squamosal. Int J Innov Res Sci Eng Technol 2:7315–7321
Vilgalys R, Hester M (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4239–4246
Vital PG, Rivera WL (2009) Antimicrobial activity and cytotoxicity of Chromolaena odorata (L. f.) King and Robinson and Uncaria perrottetii (A. Rich) Merr. extracts. J Med Plants Res 3:511–518
von Arx JA, Müller E (1954) Die Gattungen der amerosporen Pyrenomyceten. Beitr Kryptogamenfl Schweiz 11:1–434
von Arx JA, Müller E (1975) A re-evaluation of the bitunicate Ascomycetes with keys to families and genera. Stud Mycol Baarn 9:1–159
von Höhnel F (1917) System der Diaportheen. Ber Dtsch Bot Gesellschaft 35:631–638
von Höhnel F (1924) Studien über Hyphomyzeten. Zent Bakteriol Parasitenkd Abt 2:1–26
Wallen RM, Perlin MH (2018) An overview of the function and maintenance of sexual reproduction in dikaryotic fungi. Front Microbiol 9:503
Walsh TJ, Groll A, Hiemenz J et al (2004) Infections due to emerging and uncommon medically important fungal pathogens. Clin Microbiol Infect 10(Suppl 1):48–66
Wanasinghe DN, Jones EBG, Camporesi E et al (2016) Taxonomy and phylogeny of Laburnicola gen. nov. and Paramassariosphaeria gen. nov. (Didymosphaeriaceae, Massarineae, Pleosporales). Fungal Biol 120:1354–1373
Wanasinghe DN, Hyde KD, Jeewon R et al (2017) Phylogenetic revision of Camarosporium (Pleosporineae, Dothideomycetes) and allied genera. Stud Mycol 87:207–256
Wanasinghe DN, Phukhamsakda C, Hyde KD et al (2018) Fungal diversity notes 709–839: taxonomic and phylogenetic contributions to fungal taxa with an emphasis on fungi on Rosaceae. Fungal Divers 89:1–236
Wang Y, Guo LD, Hyde KD (2005) Taxonomic placement of sterile morphotypes of endophytic fungi from Pinus tabulaeformis (Pinaceae) in northeast China based on rDNA sequences. Fungal Divers 20:235–260
Wang Y, Hyde KD, McKenzie EHC et al (2015) Overview of Stachybotrys (Memnoniella) and current species status. Fungal Divers 71:17–83
Wang M, Liu F, Crous PW, Cai L (2017) Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens. Persoonia 39:118–142
Wang M, Tan XM, Liu F, Cai L (2018) Eight new Arthrinium species from China. MycoKeys 34:1–24
Watson W (1929) The classification of lichens. II. New Phytol 28:85–116
Wenneker M, Joosten NN, Luckerhoff LLP (2013) Use of (pulsed) UV-C light to control spore germination and mycelial growth of storage diseases causing fungi, and effect on control of storage rot in apples and pears. In: Ioratti C, Altindisli F, Borve J, Escudero-Colomar L, Lucchi A, Molinari F (eds) IOBC/wprs bulletin, pp 389–393
White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct se- quencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, San Diego, pp 315–322
Wijayawardene N, McKenzie EHC, Hyde KD (2012) Towards incorporating anamorphic fungi in a natural classification—checklist and notes for 2011. Mycosphere 3:157–228
Wijayawardene NN, Crous PW, Kirk PM et al (2014a) Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names. Fungal Divers 69:1–55
Wijayawardene NN, Hyde KD, Bhat DJ et al (2014b) Camarosporium-like species are polyphyletic in pleosporales; introducing Paracamarosporium and Pseudocamarosporium gen. nov. in Montagnulaceae. Cryptogam. Mycology 35:177–198
Wijayawardene N, Hyde KD, Tibpromma S et al (2017a) Towards incorporating asexual fungi in a natural classification: checklist and notes 2012–2016. Mycosphere 8:1457–1555
Wijayawardene NN, Hyde KD, Rajeshkumar KC et al (2017b) Notes for genera: Ascomycota. Fungal Divers 86:1–594
Wijayawardene NN, Hyde KD, Lumbsch HT et al (2018) Outline of Ascomycota: 2017. Fungal Divers 88:167–263
Williams TH, Liu PSW (1976) A host list of plant diseases in Sabah, Malaysia. Phytopathol Pap 19:1–67
Wong MKM, Hyde KD (2001) Diversity of fungi on six species of Gramineae and one species of Cyperaceae in Hong Kong. Mycol Res 105:1485–1491
Wu HX, Jaklitsch WM, Voglmayr H et al (2011a) Epitypification, morphology and phylogeny of Tothia fuscella. Mycotaxon 118:203–211
Wu HX, Schoch CL, Boonmee S et al (2011b) A reappraisal of Microthyriaceae. Fungal Divers 51:189–248
Yacharoen S, Tian Q, Chomnunti P et al (2015) Patellariaceae revisited. Mycosphere 6:290–326
Yahya MFZR, Ibrahim MSA, Zawawi WHAWM, Hamid UMA (2014) Biofilm killing effects of Chromolaena odorata extracts against Pseudomonas aeruginosa. Res J Phytochem 8:64–73
Yan Y, Yuan Q, Tang J et al (2018) Colletotrichum higginsianum as a model for understanding host–pathogen interactions: a review. Int J Mol Sci 19:2142
Yang T, Groenewald JZ, Cheewangkoon R et al (2017) Families, genera, and species of Botryosphaeriales. Fungal Biol 121:322–346
Yang Q, Du Z, Tian CM (2018a) Phylogeny and morphology reveal two new species of Diaporthe from Traditional Chinese Medicine in Northeast China. Phytotaxa 336:159–170
Yang Q, Fan X-L, Guarnaccia V, Tian C-M (2018b) High diversity of Diaporthe species associated with dieback diseases in China, with twelve new species described. MycoKeys 39:97–149
Yang CL, Xu XL, Wanasinghe DN et al (2019) Neostagonosporella sichuanensis gen. et sp. nov. (Phaeosphaeriaceae, Pleosporales) on Phyllostachys heteroclada (Poaceae) from Sichuan Province, China. MycoKeys 46:119–150
Yao HY, He ZL, Wilson MJ, Campbell CD (2000) Microbial biomass and community structure in a sequence of soils with increasing fertility and changing land use. Microb Ecol 40:223–237
Yen JM (1968) Etude sur les champignons parasites du sud-est Asiatique X. Sixieme note sur les Cercospora de malaisie (1). Bull Soc Mycol France 84:5–18
Yen JM (1969) Etude sur les champignons parasites du sud-est asiatique XI. Quelques especes de Sphaeriales de Malaisie. Cah Pac 13:271–280
Yen JM (1974) Les Cercospora de Cote D’Ivoire. Bull Soc Mycol France 90:307–324
Yu X, He T, Zhao J, Li Q (2014) Invasion genetics of Chromolaena odorata (Asteraceae): extremely low diversity across Asia. Biol Invasions 16:2351–2366
Zachariades C, Day M, Muniappan R, Reddy G (2009) Chromolaena odorata (L.) King and Robinson (Asteraceae). In: Muniappan R, Reddy G, Raman A (eds) Biological control of tropical weeds using arthropods. Cambridge University Press, Cambridge, pp 130–162
Zachariades C, Janse Van Rensburg S, Witt A (2013) Recent spread and new records of Chromolaena odorata in Africa. In: Zachariades C, Strathie LW, Day MD, Muniappan R (eds) Proceedings of the Eighth International Workshop on Biological Control and Management of Chromolaena odorata and other Eupatorieae, 1–2 November 2010. Nairobi, Kenya. ARC-PPRI, Pretoria, pp 20–27
Zhang YB, Zhuang WY (2017) Four new species of Trichoderma with hyaline ascospores from southwest China. Mycosphere 8:1914–1929
Zhang YB, Zhuang WY (2018) New species of Trichoderma in the Harzianum, Longibrachiatum and Viride clades. Phytotaxa 379:131–142
Zhang H, Hyde KD, Mckenzie EHC et al (2012a) Sequence data reveals phylogenetic affinities of Acrocalymma aquatica sp. nov., Aquasubmersa mircensis gen. et sp. nov. and Clohesyomyces aquaticus (freshwater coelomycetes). Cryptogam. Mycology 33:333–346
Zhang Y, Crous PW, Schoch CL et al (2012b) Pleosporales. Fungal Divers 53:1–221
Zhang J, Bayram Akcapinar G, Atanasova L et al (2016) The neutral metallopeptidase NMP1 of Trichoderma guizhouense is required for mycotrophy and self-defence. Environ Microbiol 18:580–597
Zhang JF, Liu JK, Hyde KD et al (2017) Two new species of Dyfrolomyces (Dyfrolomycetaceae, Dothideomycetes) from karst landforms. Phytotaxa 313:267–277
Zhang S, Xu B, Zhang J, Gan Y (2018) Identification of the antifungal activity of Trichoderma longibrachiatum T6 and assessment of bioactive substances in controlling phytopathgens. Pestic Biochem Physiol 147:59–66
Zhang JF, Liu JK, Jeewon R et al (2019) Fungi from Asian Karst formations III. Molecular and morphological characterization reveal new taxa in Phaeosphaeriaceae. Mycosphere 10:202–220
Zhao YM, Deng CR, Chen X (1990) Arthrinium phaeospermum causing dermatomycosis, a new record of China. Acta Mycol Sin 9:232–235
Zhao YZ, Zhang ZF, Cai L et al (2018) Four new filamentous fungal species from newly-collected and hivestored bee pollen. Mycosphere 9:1089–1116
Zhaxybayeva O, Gogarten JP (2002) Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses. BMC Genom 3:4
Zhou D, Hyde KD (2001) Host-specificity, host-exclusivity, and host-recurrence in saprobic fungi. Mycol Res 105:1449–1457
Zhu ZX, Xu HX, Zhuang WY, Li Y (2017) Two new green-spored species of Trichoderma (Sordariomycetes, Ascomycota) and their phylogenetic positions. MycoKeys 26:61–75
Zhu HY, Tian CM, Fan XL (2018) Studies of botryosphaerialean fungi associated with canker and dieback of tree hosts in Dongling Mountain of China. Phytotaxa 348:63–76
Zhuang WY (2001) Higher fungi of tropical China. Mycotaxon Ltd, New York
Zhuang WY (2005) Fungi of northwestern China. Mycotaxon Ltd, Ithaca
Acknowledgements
The Sanger sequencing cost was funded by personal research budgets of W. Purahong and T. Wubet from the UFZ-Helmholtz Centre for Environmental Research. Ausana Mapook was financially supported by Research and Researchers for Industry Program (RRI) PHD57I0012, Thailand and the German Academic Exchange Service (DAAD) for a joint TRF-DAAD (PPP 2017–2018) academic exchange grant to Kevin D. Hyde and Marc Stadler. Kevin D. Hyde thanks to the 2019 high-end foreign expert introduction plan to Kunming Institute of Botany (granted by the Ministry of Science and Technology of the People’s Republic of China, Grant Number G20190139006), Thailand Research grants entitled Biodiversity, phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans (Grant No: RSA5980068), the future of specialist fungi in a changing climate: baseline data for generalist and specialist fungi associated with ants, Rhododendron species and Dracaena species (Grant No: DBG6080013), Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion (Grant No: RDG6130001). Ausana Mapook also thanks to Shaun Pennycook, Katalee Jariyavidyanont, Dhanushka N. Wanasinghe, Ishani D. Goonasekara, Chayanard Phukhamsakda, Saowaluck Tibpromma, Sirinapa Konta and Chanokned Senwanna for their valuable suggestions and help.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Mapook, A., Hyde, K.D., McKenzie, E.H.C. et al. Taxonomic and phylogenetic contributions to fungi associated with the invasive weed Chromolaena odorata (Siam weed). Fungal Diversity 101, 1–175 (2020). https://doi.org/10.1007/s13225-020-00444-8
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s13225-020-00444-8