Supplementary Figure 1 | Botryosphaeria gaubae (W 1992-05937,
holotype). (A,B) Ascomata erumpent through the lower side of the leaf. (C)
Squash showing cylindrical or broadly cylindrical asci in cotton blue. (D) Part of
the peridium. (E) Septate pseudoparaphyses in cotton blue. (F-H) Aseptate,
fusiform to ellipsoid ascospores in cotton blue. Scale bars: (A) = 1 mm,
(B) = 200 mm, (C) = 50 mm, (E) = 20 mm, (D,F-H) = 10 m m.
Supplementary Figure 2 | Laestadia apocyni (MICH 14281, isotype). (A)
Ascomata erumpent through a piece of twig epidermis. (B) Released, hyaline,
1-septate ascospores. (C) Ascus in water. (D) Line drawing of ascus in water.
Scale bars: (A) = 200 mm, (B-D) = 20 m m.
Supplementary Figure 3 | Sphaeria smilacinina (NYS f2818, holotype). (A)
Ascomata erumpent through the twig epidermis. (B,C) Immature asci. (D)
Released ascospores. (E) Line drawing of broadly clavate ascus. Scale bars:
(A) = 500 mm, (B-D) = 20 mm, (E) = 40 m m.
Supplementary Figure 4 | One of the most parsimonious trees obtained from
combined ITS, LSU, tub2, and tef1-a sequence data of Botryosphaeria spp.
Outgroup taxa are Neofusicoccum luteum and Neofusicoccum parvum. Maximum
parsimony (MP) support values above 70% and Bayesian posterior probabilities
(PP) support above 80% are shown with MP bootstrap followed by Bayesian PP
(MP/PP) values at the nodes. The species characterized in this study
are in boldface.
Supplementary Figure 5 | One of the most parsimonious trees obtained based
on combined ITS, tef1-a, and tub2 sequence data of Neofusicoccum spp.
Outgroup taxon are Botryosphaeria dothidea and B. corticis. Maximum parsimony
(MP) support values above 60% and Bayesian posterior probabilities (PP) support
above 80% are shown with MP/PP, values at the nodes. The species
characterized in this study are in boldface.
Supplementary Figure 6 | One of the most parsimonious trees obtained from
LSU sequence dataset of Neofusicoccum spp. Outgroup taxa are Botryosphaeria
corticis and B. dothidea. Maximum parsimony (MP) support values above 70%
and Bayesian posterior probabilities (PP) support above 80% are shown with MP
bootstrap followed by Bayesian PP (MP/PP) values at the nodes. The species
characterized in this study are in boldface.
Supplementary Figure 7 | One of the most parsimonious trees obtained from
ITS and LSU sequence dataset of Nothophoma spp. Outgroup taxa is Didymella
calidophila. Maximum likelihood (ML) support values above 50%, Maximum
parsimony (MP) support values above 50%, and Bayesian posterior probabilities
(PP) support above 95% are shown with ML and MP bootstrap followed by
Bayesian PP (MP/PP/ML) values at the nodes. The species characterized in this
study are in boldface.
Supplementary Table 1 | Species, specimens and GenBank accession numbers
of sequences used in this study (newly generated sequences are
indicated in bold).